Antennarius striatus (striated frogfish): 137596702
Help
Entry
137596702 CDS
T10427
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03030
DNA replication
astr03420
Nucleotide excision repair
astr03430
Mismatch repair
astr03440
Homologous recombination
astr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137596702 (rpa1)
03420 Nucleotide excision repair
137596702 (rpa1)
03430 Mismatch repair
137596702 (rpa1)
03440 Homologous recombination
137596702 (rpa1)
03460 Fanconi anemia pathway
137596702 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
astr03000
]
137596702 (rpa1)
03032 DNA replication proteins [BR:
astr03032
]
137596702 (rpa1)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137596702 (rpa1)
Transcription factors [BR:
astr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137596702 (rpa1)
DNA replication proteins [BR:
astr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137596702 (rpa1)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137596702 (rpa1)
MMR (mismatch excision repair)
137596702 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
137596702 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Pox_vIL-18BP
A_deaminase
Motif
Other DBs
NCBI-GeneID:
137596702
NCBI-ProteinID:
XP_068173511
LinkDB
All DBs
Position
6:complement(11342961..11370606)
Genome browser
AA seq
599 aa
AA seq
DB search
MTKLSQGAIEALSNGSGGNDLVLQLTNIRKIEGGNGPPRFRVMMSDGRHTLSSFMLSTQL
NYMAEENKLAPNCICILKRHVTNTLKDGRRVVIILEMDVIKSAEDVAGRIGDPTPYTDGQ
SKVSQAVPNPEPALPLQTQNRNEVNRGFTKDFGKKAPSALPSTPGGLSKVVPIASLNPYQ
SKWTIRARVSNKSNIRTWSNSRGNGKLFSMEIVDESGEIRVTGFNQEVDKFYSLIEVGKV
YYISKCSMKMANKQFTSVKNDYEMTFNGESSVIPCEDSCDVPMVQCDFVSIGDLENRDKD
AIIDIIGVCKSVDEVTRLTTKSSREVSKRTLNLMDMSGKLVTVTLWGEDAEKFDGSGQPI
VAIKAAKLSDFGGRSLSASFSSTLMINPDIPEAHKLRAWFDRDGHVMEGQNLTVKGGSGG
GNTNWKTLSDVKTEHLGHGEKADYYTCIATIVYLRKENCLYQACPSQECNKKVIDQQNGM
FRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQLKDSNEAA
FDEVFQQANFNTYVFRSRVKLETYNDESRIKATVMEVKPVDHREYSKRLIMNIRKLAVQ
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctttcacagggtgcgatagaggctctgtcaaatggcagcggtggaaacgac
ctggtgcttcagttgacaaacattcgtaagattgagggaggaaacggtccacctcgcttt
cgtgtgatgatgagtgatggacgccacacactgtcctctttcatgctctctactcagctg
aactacatggctgaggagaataaattggcaccaaattgcatctgcatactgaaaagacat
gtaacaaatacactgaaagatggacgacgggtagtaatcattttggaaatggacgtcatt
aagtctgctgaggatgtcgcaggaagaataggtgatcctactccttacaccgatggtcaa
agtaaagtctcacaggcagtgccaaaccctgaacccgcacttccacttcaaacacaaaac
agaaatgaagtgaacagaggtttcactaaagactttgggaagaaggccccgtccgctctg
cccagcaccccaggaggcctctctaaggttgtgcctatcgccagcctcaacccctaccag
tctaagtggaccatccgcgctcgtgtttccaacaagtctaacatccgtacgtggagcaac
tctcgtggtaatggcaaactgttctctatggagattgtggatgagagtggagaaataaga
gtgactggtttcaaccaagaggtggataagttctacagtcttattgaagttggcaaggtc
tactatatctcaaagtgctccatgaagatggccaacaagcagttcacatcagtgaagaat
gactacgagatgacatttaacggggaatcctccgtcatcccatgtgaagacagctgtgac
gttcccatggtgcagtgtgactttgtctccataggtgacctggagaacagagacaaagat
gccattattgatataattggagtttgtaaaagtgtggacgaagtaactcgcctcaccaca
aagagcagccgagaagtttccaagcgaacgctcaatctgatggacatgagtggaaagcta
gtgaccgtcacactgtggggagaggatgctgaaaagtttgatggttctggtcagcccatt
gtggctattaaagcggcgaagctttcagactttggaggccgatccctctctgcatccttc
agcagcacacttatgatcaaccccgacatccctgaggcgcataagcttagagcctggttt
gacagggacggtcatgtcatggaagggcagaatctgacggtgaaaggtggcagcgggggc
ggaaacaccaactggaagactctgtctgatgttaagacggagcacctgggccatggagag
aaggcggactactacacctgcatagccacaatagtctacctgcgcaaggagaactgcctt
taccaggcctgtcccagccaggagtgcaacaaaaaagttatcgaccaacagaacggcatg
ttccgctgcgagaagtgtgacaaagagttccccaacttcaagtatcgcctcatcctctct
gccaacattgcagattacggggacaaccagtgggtgacttgcttccaggagagtgcagag
gccatcctgggccagaatgcagcttatttggggcagcttaaagactcgaacgaagctgcc
tttgatgaggttttccaacaagccaacttcaacacgtacgtcttccgcagcagagtcaag
ctggaaacatataatgatgaatccaggatcaaggccacagtgatggaggtgaagcccgtt
gaccacagggagtacagcaagaggttgatcatgaatattaggaaactggccgttcagtag
DBGET
integrated database retrieval system
