Antennarius striatus (striated frogfish): 137598656
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Entry
137598656 CDS
T10427
Name
(RefSeq) regulator of nonsense transcripts 1-like isoform X1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03013
Nucleocytoplasmic transport
astr03015
mRNA surveillance pathway
Brite
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137598656
5.6.2.5 RNA 5'-3' helicase
137598656
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137598656
mRNA cycle factors
Common to processing body (P body) and stress granule
137598656
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137598656
NCBI-ProteinID:
XP_068175155
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Position
7:19763662..19778517
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AA seq
1102 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQLDNQVNG
PDEGLLNGGVDDSVAKASQLLAELNFEEDEEDAYYTKDLPLHACSYCGIHDPACVVYCNT
SKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPA
KADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITA
QQINKLEELWKDNPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKK
LKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDLAPLWKGIG
HVIKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS
GYIYHKLLGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK
TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF
LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCV
GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA
GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQ
WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEG
QRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR
LNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRK
LVNTINPGGRFMSTAMYDAREALIPGSAYDRSSTAGRPSNMYFQTHDPIGMIGQGPGQMA
AMNIPIPFNLMMPPMPPPSYQGQTNGPAAGRGAMKGKLGRGGRQRIRGSGHQGPSQGNGP
HSLASQDGASQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALS
QDSTYQGERAYQHGGVTGLSQY
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggaggcgtacgggccgagctcccagaccctcaccttcctggacaccgaggaa
gcggagttactcggagcggacacacagggttccgaatacgactttaccgactttacccta
cccagccagacgcaaactcaaggccatacccagagccagttggacaaccaggtaaatggt
ccagacgaagggcttctcaacggtggtgttgatgactctgtagccaaagccagccagctg
ctggctgagctcaactttgaggaggatgaagaagatgcatactatacaaaagacctgcct
ttgcacgcgtgcagctactgtggcatccatgatccagcttgtgtggtttactgcaatacc
agcaagaaatggttctgcaatggacgtggcaacacatccggcagtcacattgtaaaccac
ttagttagagccaaatgcaaagaggtgacgctgcataaagatgggcccctgggtgagacg
gtgctcgagtgttacaactgcggctgtcggaacgtcttccttttgggcttcattccggcc
aaagctgattctgtggtggttcttctctgcaggcagccctgcgccagccagagtagcctg
aaggatatcaactgggatagctcgcagtggcaacccctgatccaggatcgctgctttctg
tcctggctggtcaagattccgtcggagcaggagcagcttcgggctcgtcagattaccgcc
cagcagatcaacaagttggaggagctctggaaggataaccccactgccactttggaagac
ctggagaaacccggagtggacgaggagccccagcatgtcctcctgcgctatgaagacgcc
taccagtaccagaacatctttggccctttggtcaaactggaggctgattatgacaagaag
ctcaaggagtcccagacccaagataatataacggtcaggtgggacctggggctgaataaa
aaacggattgcctatttcacactgcccaagacggattcaggtgatatgcgtctgatgcaa
ggtgatgagatctgcttgcggtacaagggagatctggcccctctctggaaaggcatcggt
catgtcatcaaagtccctgacaactatggtgatgaaattgccattgaattacgaagcagc
gttggagcccccgtggaaatcccccacaacttccaggtggattttgtctggaaatccaca
tcttttgacaggatgcagagcgccctgaagacgtttgctgtagatgaaacttccgtgtct
ggctacatttaccataaattactcggtcatgaggttgaggatgtcaccatcaagtgccag
ctgccaaagcgcttcactgcccaaggcctgccggatctcaatcactcacaggtgtatgct
gtgaaaacagttctgcaaaggcccctcagtctgatccagggcccccctggcaccgggaag
accgtcacctctgccaccatcgtctatcacctgtctcgacaaggcaacgggccagtgcta
gtgtgtgctcccagcaacattgctgttgatcagttgacggagaagattgacaagacggga
ctgaaggtcgtcaggctgtgtgccaagagccgagaggccatagagtcaccagtgtccttc
ctggctcttcataaccagataagcaacatggacagcatgccagagcttcagaaactacag
cagctgaaggatgagacgggcgagctgtcgtccgctgatgagaaacgctacagggctttg
aaacgcactgctgagagagagctgcttatgaatgccgatgttatctgctgtacgtgcgtc
ggggccggtgatccacgtctggcaaagatgcagttccgctccatactgattgatgagagc
acccaggccaccgagcccgagtgtatggtacccgtggtgctgggagccaagcagctaatt
ctggtgggcgatcactgccagttgggtcctgtggtgatgtgtaagaaggcagccaaagcc
gggctgtcccagtccctgtttgagcgcctagtggttctaggcatccgaccaatccgcttg
caggtgcagtaccgtatgcacccagctctcagtgccttcccttccaacatcttctatgag
ggctccctgcagaatggagtcactgcagctgaccgcatcaaaaaaggttttgatttccag
tggccacagccagacaagcccatgttcttctatgtgacccagggtcaggaggagatcgcc
agttctggaacctcataccttaacaggactgaggctgccaatgtagagaagatcaccacc
aggctgctgaaggcgggggccaaaccggaccagatcggcatcatcaccccgtatgagggc
cagcggtcctacctggtccagtacatgcagttcagcggctccctgcacaccaaactgtat
cagcaagtggaaattgccagcgtggatgccttccagggcagggagaaggacttcatcatc
ctgtcttgtgttcgtgccaatgagcaccagggcattggcttcctaaacgacccacgtcgt
ctcaacgtggcgctgaccagagccaagtatggtgtgatcatcgtggggaaccccaaagcc
ctctccaagcagccgctgtggaacaacctgctgaacaactacaaggagcagaaggtcctg
gtggagggacccctcaacaacctgagggagagcctcatgcagttcagcaagccccgcaaa
ctggtcaatacaatcaaccctggggggcgttttatgagcactgcaatgtatgacgcccgt
gaagccctcatccctggctccgcctatgaccgcagcagcactgctggacgtccgtccaac
atgtactttcaaactcatgacccgattgggatgattggacaaggcccgggtcagatggca
gcgatgaatattcccatacctttcaatctgatgatgccgccaatgcccccacccagttat
cagggtcagaccaacggcccagctgcaggtcgtggagccatgaagggtaaactggggcgt
ggcgggcggcagaggatccgcgggtcgggacaccaggggcccagtcagggtaacggaccc
cacagcctggccagtcaggacggggcttcccagcccttctcccaggggccgctgacccag
ggctacatctccatgagccagccctcacagatgagccagccaggcctgtcccagccggag
ctgtcccaggacagctatctgggcgatgagttcaagtcccagatcgatgtggctttgtcc
caggactcaacttaccagggtgaacgtgcataccagcatggaggggtaactggactgtca
cagtactag
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