Antennarius striatus (striated frogfish): 137599499
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Entry
137599499 CDS
T10427
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04137
Mitophagy - animal
astr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137599499
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137599499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
astr04121
]
137599499
Enzymes [BR:
astr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
137599499
Ubiquitin system [BR:
astr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137599499
Multi subunit type E3
ERAD complex
137599499
LMBR1L-GP78-UBAC2 complex
137599499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
137599499
NCBI-ProteinID:
XP_068176580
LinkDB
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Position
1:29448048..29457803
Genome browser
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYSALSVALLAGSIFSAYTTVTDPGFGALETEETAAPSEADLEHL
NNDISNTELAANILWYLVTDSLFVWALVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHIRVLCLLVSLLLECCGLAVVCGLLGASYGMHTLSFMAAECLLVTVRTGHVIIRYSIH
LWDLKHPGTWESKGTYVYYTDFIMELAMLFLDLLHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDSMLSARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNISGEGEQARSQPQGGALEGNIGPAGPTPDARPHINQR
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLTAMAHQIQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERGPTQINPGSGEQEEPSGAAEQGISESENM
EVRGGRFSKSADERQKMLRQRKEEMLQQARRRYLNKSPEDQDEDLPGLEEDTVLEVNLAT
LRRRTMAAAAERRMHNHQDSAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttgttcctggagaggtttccttggcccagcttacagacctactcggcactg
agtgtggctttgctcgctggaagcatctttagcgcctacaccactgtgacagacccaggt
tttggggccttggaaaccgaagaaacagcagccccctctgaagcagaccttgagcatctt
aacaatgacattagtaacacagaattggcagctaatatcttgtggtatcttgtcacagac
agtctctttgtatgggccctggtcaacacattttgctgctctttgatgttaatagccaaa
atgattcagtatgtggtgtttggtccactcagagtcagtgagaagcagcacctgaaagat
aaattctggaacttcatcttctataagttcattttcatctttggagtcctgaacgtgcag
acagttgaggaggtggtgatgtggtgtctgtggttttctgcccttgtctttctccatctc
atggtgcagctttgcaaagacaggtttgaatatctgtctttctcaccctccactcccatg
aacagccacattcgagtgctgtgtttgctcgtctccctgctgctggagtgctgtggtctg
gctgtggtctgtggtctgttgggagcctcctacggcatgcacactctctcctttatggca
gcagagtgtctgcttgtgactgtgcgcacagggcatgtcatcataagatattccatccat
ctgtgggatctgaaacatccaggaacctgggagagcaaagggacatacgtttactacaca
gatttcatcatggagctcgctatgctctttctggaccttctgcatcatatccatatgctg
ctgttcggtaacatctggctgtccatggccagcttggttatcttcatgcagcttcggtat
ctcttccatgaggtccagcgccgtgtccgcagacacaagaactaccttcgtgtcatcaac
aacatggaggccaggtttgcagttgctactgcagaggagctggcagctaatgatgacgat
tgtgccatctgctgggattctatgttgtcagcacgcaaactgccatgcggccatctcttc
cacaactcttgtttgcggtcgtggcttgagcaggacacctcttgtccaacatgtcggaca
tctctaaatatcagtggggaaggtgaacaggcaaggagccagccacagggcggggctctg
gaaggcaacatcggcccagcgggaccaactcctgacgctagaccacatatcaaccaacgc
aatcacttcttccactttgatggctctcggattgccagctggctgcccagtttctcagtg
gaagtcatgcacaccactaatatcttgggcattgctcaggccaacaactcccagctcact
gccatggcccatcagatccaggagatgtttcctcaggtcccctcttacctggtgatgcag
gacctgcagttgacccgctctgtggaggtcactactgacaacatcttggaaggacgcatc
caggtgcctttcccaacgcaggccatagagcgtgggccaacacaaatcaatccaggttca
ggagagcaagaagaacctagtggagcagctgagcagggcatcagtgagtcagaaaatatg
gaggtgaggggaggtcgcttctctaagtcagctgacgaaaggcagaagatgttaaggcag
aggaaagaagagatgctccagcaagcacgcaggagatatctgaataagagtccagaggat
caggacgaggacttgcctggactggaggaggacactgttctagaagtgaacttggccaca
ctgagacgtagaaccatggcagcagctgcagagagacgcatgcacaatcatcaagattct
gcaccctaa
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