Antennarius striatus (striated frogfish): 137599723
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Entry
137599723 CDS
T10427
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03030
DNA replication
astr03410
Base excision repair
astr03420
Nucleotide excision repair
astr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137599723 (rfc1)
03410 Base excision repair
137599723 (rfc1)
03420 Nucleotide excision repair
137599723 (rfc1)
03430 Mismatch repair
137599723 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astr03032
]
137599723 (rfc1)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137599723 (rfc1)
DNA replication proteins [BR:
astr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137599723 (rfc1)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137599723 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
BRCT_2
AAA_5
AAA_17
RuvB_N
Rad17
AAA_33
AAA_14
AAA_19
AAA_16
AAA_18
AAA_7
nSTAND3
RNA_helicase
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-GeneID:
137599723
NCBI-ProteinID:
XP_068176893
LinkDB
All DBs
Position
8:18451618..18466155
Genome browser
AA seq
1170 aa
AA seq
DB search
MDIRRFFQPTSAKPAAQKSTSKGDIKAEKKKNSLSDEEVKKKATKVKSKPEEKHKVGDKK
RKKHGVIDSDSDEEELARKSKKSPPKKSKMRMTEQPSKKDPVQYVSETDSDSDTFQSLKK
VSKPKQNGRAKPSKSNPESTHPGTKMVKSPGKSSSTQSKSTAKSPVTPKTAPPPSPKQTP
TSVLEYFGSAAIQRSDKKLVGSTKRKAPTEDTDELISDEQIARALQMDEDMELEKQVHED
EDFARTLAMLDNEPQAKKARKGSDDKTIPVTSPKKSSSNYAASSTSSSSKSSQRCNVSDD
AMTQSHKKNADQVKTSSKLAMMKKKDEEGDEGLKVKAAVSPRKPKISPKKEPLASSSPDM
KVTPTTAKTSPKKPEGTSPDDTQKKINTSAYRNYLNRDGPRALGSKEIPKGAENCLEGCV
FVVTGVLESMERDEAKSLIERYGGKVTSNISKKTTYLVQGRDSGVSKLEKAQSFGTQILD
EDGLLELIRTTPGKKSKYVIAAEAERKVSVTRTPPSKTSKSTPKSQKTSPSKGNSTSPHT
PSPSKTSLVQGHGAKFKEGGTPAGRGSRYTARRDLALSSSSPSSSGLSSLSTGECDSLLW
VDKYRPLSLKAVIGQQGDQSCANKLLRWLQNWYKHHGGNASKPPAARFGKFGGGKDDGSG
YKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCTRSKKNLKEVVAESLNNTTIENFY
KGTSQTVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKNSKIPIICMCNDRNHMKIRSLA
NYCYDLRFQRPRVEQIKGAMMSMAYKEGIKIPPPALNEMILAAGQDIRQVIHNLSMWSAK
DRVMSYDQCKSDAAKARKDTKMGPFDVCRKVFSSGEETSHMSLIDKLDLFFHDYSLAPLF
VQENYLHVRPQAAGGNMKSHLVLLSKTADSISDGDLVDRRIRSGQNWSLLPTQAIYASVL
PGELMKGYMSQFPTFPSWLGKNSSTGKHSRIIQELASHMSLKTLSSRQAVNLDYLHYLRQ
LLLSPLQKLGADGAGVAVQLLDDYQLLKEDVDSIMEISIWGGKPDPYSKLDSKVKSAFTR
TYNKEAHLMPYSLQGVKKGRRGGGGVESELGGEDVDNDMQESEDEAEGLKTDAMIKKKAK
AMKESNKEKTEDSGKGKGKGASKGKGKAKK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggaggttctttcagccgacttcagccaaacctgcggcgcagaaatcgacc
tcaaaaggggacattaaagcagagaagaaaaagaattctctgtcagacgaggaagtgaag
aagaaagcgactaaagtcaaaagcaagcctgaggagaaacacaaggttggtgacaaaaaa
cgaaagaaacatggagtcatagattcagattctgatgaagaagaattagcccggaagtca
aagaaatcccccccaaaaaaatcaaaaatgagaatgactgagcagccttccaaaaaagat
cctgtgcagtatgtctctgaaacagactcagacagtgatacttttcagtctttgaagaaa
gtctccaaacccaagcagaatggtagagccaaaccatcaaagtcaaatcctgagagcact
caccctggaacaaagatggtgaagtcgcctggcaaatcctcttccacacagagtaaaagt
acagcaaagtctcctgtcaccccaaagacagccccacctccttcacccaaacaaaccccc
acctctgtactagaatacttcggcagtgcggcaattcagcgctctgataagaagctcgta
ggcagcaccaagcgaaaggctccaactgaggacacagatgagctcattagcgatgaacaa
attgccagagcactgcagatggacgaggacatggagctagaaaagcaggttcatgaagat
gaggactttgccagaacgttggcgatgctggataatgagcctcaagcaaagaaggctcgt
aaaggctcagatgataaaacaatccctgtcacatctcccaaaaagagcagttcaaactat
gctgccagcagtacctccagctcttcgaagtccagtcaaagatgcaacgtgtcggacgat
gcaatgactcagtctcataagaagaacgctgaccaggtcaaaaccagctctaaactggct
atgatgaagaaaaaagatgaggagggagatgaaggtctgaaggtgaaagctgcagtttcc
cccagaaaaccaaaaatctctcccaaaaaggagccacttgcttcgtcaagcccagacatg
aaggtcacacccaccacagccaagacttctcccaagaaaccagagggcacaagtcctgat
gatacacagaagaagatcaacacatcagcttacaggaactacctcaacagagatgggccc
cgagctctgggctccaaggaaattcctaagggtgcagagaattgtttggagggctgtgtg
tttgtggtgactggtgtcctggaatcaatggaaagagatgaagccaagtccctgatcgag
cgctacggaggcaaagtgacaagcaacatcagcaaaaagaccacctacctggtgcagggc
agagacagtggcgtctcaaagcttgaaaaggcacagagttttggtacccagatcctggat
gaggatggtctgttagagctgatcaggacaacaccaggaaagaagtccaaatatgtcatt
gctgcggaggctgagaggaaggtgtcagtgacccgcacgccccccagtaaaacttcaaag
agcacccccaaatctcagaagacgtctccctccaaaggtaactctacatcgcctcacacc
ccaagtccgtcaaagaccagcttggtgcaaggccacggtgccaagttcaaggaaggtgga
actccagctgggagaggctcacgttacacagctaggagagacctggcgctttcatcttct
tctccatcttcttctggattgtcatccttatcgactggagagtgcgacagtctgctgtgg
gttgacaagtaccggccgctgtctttgaaggctgttattggccagcagggagatcagagc
tgtgccaataagctgctacgttggctgcagaactggtacaaacaccacggcgggaatgct
tctaagccaccagctgcaaggtttggtaagtttggaggaggaaaagatgatggatcagga
tacaaagctgctctgctctctggacctccgggtgttgggaagaccacaacagctgccctg
gtctgtgaggaattgggcttcagttatgtggagatgaatgctagctgcactcgcagtaag
aagaatttgaaagaagttgtcgcagaatctcttaacaacacaaccattgaaaatttctac
aaaggcacgtctcagactgtgagcagcaaacatgtcctgatcatggatgaggtagacggc
atggctggcaatgaggaccgtggaggaatccaggagatgatcggcctgatcaaaaattca
aagattcccattatctgcatgtgcaacgatcgtaaccacatgaaaatcaggtcactggcc
aactactgctatgacctccggttccagagaccacgagtcgagcagatcaagggagccatg
atgtccatggcttacaaggagggaatcaaaatcccacccccagctcttaatgaaatgatc
ctagctgccggtcaggatatccgacaggtgatccacaatctgagtatgtggtcagccaaa
gacagagtgatgtcttatgaccagtgtaagtctgacgcagccaaagcccgcaaggacacg
aagatggggccgtttgatgtttgtaggaaggtgttttcatcaggggaggagacatcccac
atgagcctcatcgacaaactggatctctttttccacgactactcactagcaccactcttt
gttcaagagaactaccttcatgttcggccacaagctgctggtggtaatatgaagtctcac
ctagttttgctcagcaagacagctgactccatttctgatggagacctggtggacagacgg
atccgctctgggcagaactggtcactactgccaacccaggccatttatgccagtgtgcta
ccaggcgagctcatgaaaggctacatgagtcagtttcccacttttcccagctggctcggc
aagaattcttctactggtaaacattcccgcatcatccaggagctggcctcacacatgagt
ttaaagactctgagcagcagacaggcggtaaacctggactacctccattacctgcggcag
ctgctgctgagcccgctgcaaaaactcggagcagatggagctggcgtagccgtgcagctg
ctggacgattaccagctcctcaaggaggacgtggatagcatcatggagatcagcatctgg
ggaggaaaacccgatccgtactccaaactggactctaaggtgaagtcggcatttacacgg
acctacaacaaagaagctcacctgatgccatactccctgcaaggagtaaaaaagggtcgt
cgtggtgggggcggtgtagagtcagagttgggaggcgaggatgtggacaacgacatgcag
gagtctgaggatgaggcagagggcctcaaaacagatgccatgatcaaaaagaaggctaaa
gctatgaaggaatcaaataaagagaagacagaagattctgggaaggggaaagggaaaggg
gcaagcaaggggaagggcaaggccaagaaataa
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integrated database retrieval system
