| Entry |
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| Symbol |
tnrc6c2
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| Name |
(RefSeq) trinucleotide repeat-containing gene 6C protein
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
astr Antennarius striatus (striated frogfish)
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| Brite |
KEGG Orthology (KO) [BR:astr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:astr03019]
137599803 (tnrc6c2)
03036 Chromosome and associated proteins [BR:astr03036]
137599803 (tnrc6c2)
Messenger RNA biogenesis [BR:astr03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137599803 (tnrc6c2)
Chromosome and associated proteins [BR:astr03036]
Eukaryotic type
Gene silencing
piRNA pathway
137599803 (tnrc6c2)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(21024580..21068045)
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| AA seq |
1873 aa
MEEKKKKKQEEKTKTDIIQKKAADQKPKVPEPAPTKPSLNPPPYHLPPTSPTLPLSSSSS
SGNGKRTSTSCQLPTQTPPQQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPAGA
LSVLTLSSSSSVSASYSSPSTTTASSTPDCVTSTAGNHSPDISIQTGPVTQYETPHWGPS
IPVDSASSANCWDKVIIDESDTEAWPLINRSSDPCHPAAPECPLGSASPNQDTSAVTTIC
SSSFLSMATGAAGQQAHYPSLKATNNMMTGPGSANTLAGNRGWGSDGKQDGMNHGRITAP
NNWSSPNFNLNLNPNANPSAWPVLGHEGGGGGGPNRVSNSPSLPPGINGNGKIGNGSLGD
ADSGGGSWVGMISANENDQQHTSTNKSLSFNMEPANLDTNGPNHMNQQQQTQDPMSPIHG
LTGWGGQSPTESSQLNGDTTGSSVWGSGDTKAADSPKASSWDSTPSGGLSAWGVQGSGGG
EGGGWGEWGKSSTDASKGWESVDAGSSGSGQEQQISSWGQQSGTAPASEGSGDSNDGQSH
SRDRSSSMDFTPILPRQDLDPKVLSNTGWGQTPIRQNTVWEMEEANSDNGKSISICDTLE
DSNGGTPSTNGGTINPNIASSQRPRSVEKSEGPSSSGWGAPPPQPIQTGSGWRDPPQSLS
KAQNGTASGWGDPLPAIGSRNGGTPSWGSEEKTPNWDDGLMKDQSNSWGEGSKSSRAWDN
SNGGSNGSSTGDWGESELKNNGSSSMWEGESGTGEGNGWKESPRAGSRGGGWAKSATAGT
NGSWGEIPRTNGQVQGGWGSSKPQESSSSSTGSGGGGSIGSWGGPGSVKQNKSSWGSGNK
QDQGMEATGWEEPSPPSIRRKMEIDDGTSTWGDPTSYKKTVNMWDRNNVSNNQGNSGAPP
NKNGGVIIPNNHSVGHGNNNHLAHHMHHHPQHSQPPTHPQHHGNNNGSPNNGASHPGATS
QGRPPLANPGWGELPNVQPKSEPAWGEPAAPTSTVDNGTSAWGKPTGGIGGWGDGGHEPP
GPYGRANGLPSSAPCKPGPKSMQDSWGNGGEEIVMSTSQWDAEDGDMWNSPTTAQENSTN
SWSNGPKKGPSKGKICNKTDEVWIMNRLIKQLTDMGFPRDPAEEALKSNNMNLDQAMSAL
LEKKTDLDKRGMSMSDYSNGMNKPMVCRPSAISKDPSDRNSFLDKDGVMSDDAPSSPFLP
SPSLKLPLTNSSLPGQGLGQGNPGLAMQNLNRPQIPSGMFGSSGAAQTRAMQQQQQPPPQ
PPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQQMTLLYQLQ
QLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQRQLYQALLMKQH
QLPSHSSSSSSAGLHPLGCTAGGPGSGKSTLDPFTVPHQAPGLADTLHTKEPPSSPNAYS
TYPLTGLNPNMNVNCMEVGGLSLKEPPQPQSRLSQWTHSNSMDSVSCNSSNMENNLNKHG
AISASSTLPPPGKPPQLEDSYSPYNMMSTSESPSGPLVPPDSWSQGKSPNEKISNGTNIN
WPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRNGGKLSDMK
STWSAGPVSQSQASLSHELWKVPQGPRSTTTPSRPPPGLTNNKPSSTWGGNSLGLAQGWS
GSYSSEGTTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLTQGNAVV
RYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGANANSWQANPGNNQ
NRMGTTQSHSIGQWSSGGGGGGGKTSGGDLLWGGVPQYSSLWGPPNGEDARVIGSPTPIN
TLLPGDLLSGESM |
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| NT seq |
5622 nt +upstreamnt +downstreamnt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaaaactgacatcatccagaaa
aaggctgctgatcagaaacccaaagtgccagagcctgctccgactaagcccagtctcaac
ccaccaccctaccacctcccccccaccagccctacgcttcccctctcctcctcctcttca
tctggcaatggcaagcgcacctctaccagttgccaactcccgactcagactccccctcag
caacagtgccagttgtcctctgccagtgctcgctacccacccagagaggtgcccccacgc
ttccgccagcaggagcacaagcagctgctaaagagaggccagccactgcctgctggagcc
ctcagtgtgctcaccctctcctcctcttcttcagtctcagcatcttactcttcgccttct
acgacgaccgccagcagtactccagactgtgtcacatccactgctggcaatcactcacca
gatatatccatccagactggccctgttactcagtatgagacacctcattggggaccctct
ataccagttgacagtgcctccagtgccaactgctgggacaaagtgattattgacgaaagt
gacacagaagcttggcccttaatcaaccgcagtagtgacccctgccaccctgcagcacca
gaatgccccttgggctcagctagccctaaccaagacaccagtgctgtcactaccatctgt
agtagtagttttctgagtatggccacaggtgccgcaggccagcaggcccactacccctct
ctcaaagctaccaataacatgatgacgggacctgggtccgccaatacattagctggtaat
agaggctggggttcagatggaaaacaagatggaatgaatcatggacgaataacagcaccc
aacaactggagctctcccaactttaacttgaacctcaatcccaatgccaatccatctgcc
tggcctgttctcggtcatgagggcggaggtggtggtggcccaaatcgggtgtcaaactcc
ccatctctacctccaggtattaatggcaatggaaaaattgggaatgggagcctgggtgat
gctgacagtggtggaggaagctgggttggcatgataagtgctaatgaaaatgatcaacag
cacacttcaaccaacaaaagcttgtccttcaatatggaacctgctaaccttgacactaat
ggaccaaaccatatgaatcaacagcagcaaacccaggaccccatgagccccatccatggt
ttaactggctggggaggccagtcacccactgaatcatcccagctcaatggggacacaaca
ggcagctctgtgtggggaagtggagataccaaggcagctgattctcccaaggcttcaagc
tgggactcaactccttctggaggcctttctgcctggggtgtccaaggcagtggtgggggt
gaaggtggtggctggggtgagtgggggaaatcctctactgatgcatctaaagggtgggag
tcggtagatgctggtagttctgggtcaggccaagagcagcaaattagctcatggggtcag
cagtctggaacagccccagcaagtgagggtagtggggacagcaacgatggtcaatcccac
agtagagacagatcctccagcatggattttacgccaatattaccccggcaggacctggac
cctaaggtgctgagtaacacaggttggggacagacccccatccgacagaacactgtatgg
gagatggaagaagcaaactctgataatgggaagagcattagcatttgtgacaccttagaa
gactctaatggtggaaccccatccaccaatggaggtaccatcaacccaaatattgcttct
agtcagaggcctaggtctgtagaaaaaagtgaagggccatcatcctctggctggggagcc
ccgccacctcagccaattcagaccggatcagggtggcgggatcccccacaatccctcagc
aaagcccagaatggcactgccagtggatggggagaccctttgcctgccattggttccaga
aatggaggtacgccatcatggggttctgaggaaaagacccccaattgggatgatggcctg
atgaaggaccaatctaatagctggggtgagggctctaaaagctcccgagcttgggacaac
agcaatgggggctccaatggctccagtactggtgactggggagaatcagagctcaaaaac
aatggatcatccagtatgtgggaaggagaaagtgggaccggagaaggtaatggttggaaa
gaaagccccagagcaggaagtagaggaggaggttgggcaaaatcagctactgctgggaca
aatggtagctggggggagattccacgcaccaatggccaggtgcaaggaggctggggatct
tctaaaccccaggaaagcagtagcagtagcactggcagtggaggaggcggtagtattggt
tcctggggtggtccaggttctgtgaagcagaacaaatctagctggggcagtggtaacaaa
caggaccagggtatggaggctactggctgggaagagccctcccctccctccattcgcaga
aaaatggagattgatgacggcacatccacttggggtgatcccacatcctacaagaagact
gtcaacatgtgggatcgcaacaatgtcagtaataaccaaggcaacagtggtgcacctccc
aataaaaatggtggagtgattatccccaacaatcactctgttgggcacggcaacaacaat
catcttgctcaccacatgcaccaccatccacaacacagccaacccccaactcacccacaa
caccatggaaacaacaatgggtcacccaacaatggtgcctcacatccaggtgcgacttcc
cagggtaggcccccccttgccaacccaggttggggagagcttcccaatgttcaacccaag
tcagagcctgcttggggagagccagcagctccaacatcaacggtggacaatggcacttct
gcctggggtaagcccacaggaggaataggaggatggggagatggtggccatgagccccct
ggaccttatggcagggccaatggactcccaagttctgcaccctgcaagccaggccccaaa
tctatgcaagatagctggggaaatggaggagaggagatagtcatgtccactagccaatgg
gatgcagaggatggtgacatgtggaacagtcccaccaccgcccaggagaacagcactaac
tcctggagcaatggacccaagaagggtccaagcaagggtaaaatttgcaacaaaacagac
gaggtttggatcatgaaccgtcttatcaaacagcttactgacatgggttttccgagagac
cctgctgaggaggcgctgaagagcaacaacatgaatcttgaccaggccatgagtgctctg
ttggagaaaaagacagacctggacaagcggggaatgagcatgtctgattacagcaatggc
atgaacaagcccatggtgtgtcggccctctgcaatctccaaagacccttctgaccgcaac
tcctttcttgacaaggatggtgttatgtcagacgatgccccttcatcaccatttctgcct
tcccctagcctgaagctccccctgaccaacagtagccttcctgggcagggtctggggcag
ggcaacccggggttggccatgcaaaacttgaacagaccgcagatacccagtggaatgttt
ggcagcagtggagcagcacaaacccgggccatgcagcaacagcagcagcctcctcctcag
ccaccagtgccacctctcagctcctcccagcctagtctacgtgctcaagtgcctcagttt
ctttcccctcaggtccaagcacaactcttgcagtttgcagcaaaaaacattggtctgaat
cctgcacttttaacctcaccaataaaccctcaacaaatgactctcttgtaccaacttcag
caactgcaaatggcataccaacgtttacaaatccagcaacagatgatgcaggcacaacgc
aatgtttctggccccataagacaacaagagcagcaagttgcacgaacaatcaccaacatg
caacaacagatccagcagcaccagcgtcagctgtaccaagcgttgctgatgaagcaacac
caacttccctctcattcctcctcttcctcttctgctggtctgcatcctctcggttgcact
gctggaggccctggttctggaaaatcaacccttgaccccttcacagtcccacaccaggct
ccaggcctcgcggacacactgcacaccaaagagcctccatcttcgcccaatgcctacagt
acctaccctctcactggactgaatccaaacatgaatgtaaactgcatggaggttgggggt
ctgtccctgaaggagccccctcagccccaatctcgcttgtcccagtggacacactccaac
tccatggacagcgtctcttgcaactcctcaaacatggagaacaacctcaacaagcatggt
gccatatctgctagttctaccctacccccccctggaaaacctcctcagctggaggactca
tacagcccttacaatatgatgtccacttctgagtcccccagtggccccctggtgcccccg
gatagctggagtcaaggcaaaagcccaaatgaaaagatctccaatgggaccaacattaac
tggcccccagagttctgccctggtgttccatggaagggccttcagaacatcgaccctgag
aatgaccccaacatgactcccggcagtgtccctagtggtccaaccatcaataccaacatc
catgatgtcaatcgttacctgctgcgggacaggaatggaggtaaactgtctgacatgaag
tccacctggtctgcaggacccgtttcccagagccaagcttctttgtcccatgagctgtgg
aaagtcccccaggggccacgcagcaccacaacaccttcccggcccccgcctggcctcacc
aacaacaagccatcctccacttgggggggcaactctctgggcctggcccaaggttggagc
ggctcctactcctctgaggggacaacctggagcacggacagctccaacagaaccagcagt
tggctggtgctgaggaatctcaccccacagattgatggctccactctgcggaccctgtgc
atgcagcatggccccctgatcacattccacctcaacctgacccaggggaacgctgtggtg
cgctacagctccaaggacgaggctgcaaaggcccagaagtctctgcacatgtgtgtgctt
ggaaacaccaccatcctggcggagtttgccggcgaggaggaggtgaaccgcttctttgca
caaggccagtcgctaggggcgaacgccaatagctggcaggcaaatccgggaaacaatcaa
aaccggatggggacgacacagtcccactctatcgggcagtggagtagcggcggcggaggc
ggcggaggcaaaaccagcggaggtgacctcctgtggggcggggtgccccagtactccagt
ctgtggggacctcctaacggagaagatgcgcgcgttattggaagcccaacccccattaac
accctgctacctggagatctgctgagtggggagtccatgtag |
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