Antennarius striatus (striated frogfish): 137600039
Help
Entry
137600039 CDS
T10427
Symbol
patl1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137600039 (patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137600039 (patl1)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137600039 (patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
137600039 (patl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
137600039
NCBI-ProteinID:
XP_068177492
LinkDB
All DBs
Position
8:25041675..25061575
Genome browser
AA seq
826 aa
AA seq
DB search
MFRFQSLDDDCTLEGEDEGLIEEEDEIDQFNDDTFGAGAINDDWQEEHKRLAELDQRNGL
GGGMGTKSNFGGAQNPSTTHVPSPAVQLPLSSSLHSLKFSSCSGQPPQDAEDRAGGGDLA
ESLTRLILEADPAITVVGAAEIPRGPPNASGSDLPALQVQDQARVLPQPSIIPHPTQPHQ
HPHQLQLLPRPSTSGLSSGPPPPSMLSYQQQQHLLRRGTAPIGQVSSDNIWENTLGFGPV
SVTPRLVPHVEDSPLMSIIKEVGLPKRSPQCRNDDGQDLSERVPPPRSSSPVIGSPPVRA
VPIGTPPKQPMSHVLNHQIHHPMAVHVRAPVQHRYPPPFPERLSPNTLLNIANSPLCCSP
FPPGVGPVLSQIQRAQLLNSQVAGFPRGSPAPSLLPGGGGFRPFFGGPPPPHGHRMGLQA
PHGPSNHVPPIRHNTTHLHPQHRRMLTQRMQNRACDRGRTGGDRRSRDPYSNLMTQKEKE
WVTKIQMMQLQSTDPYLDDYYYQNYYEKMEKRQERERDSSKKEHTTKLITPQVAKVEHSY
RPVQFAGSLGKLTVSSVNNPRKMIDAVVTTRSDDEEKREKQVWNRRRQVLYTVEKMYSLL
LEVQDFEKRFLQAPEEDRETLLEKHKANTMQLCTCLREKEWEERVSDEQCVMIMSVRKGK
RLISRLLPLLPSPQATAVVMAIARNLPALAKKDKQDQVLCWLVEPVSAVIQSLSSSALTD
LLQELQDNDGQLAKVLLNKFGVTLLYLVLNEGERMHGAQPSCQLMDDNRWTELVFSVTRG
LLSVPSSSLASPLVLPPNLLPLLSRYVDRPTLELLQEKLKISASSR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggtttcagtccctggacgacgactgtacattggagggggaagacgagggactg
attgaagaggaagatgaaattgatcagttcaacgatgacacatttggagctggggccatc
aatgacgactggcaggaggaacacaaacgcctcgctgagctggaccagaggaatgggttg
ggaggaggaatgggaacaaaatctaattttggtggagcccagaacccatccacaacccat
gtcccttcccctgccgtccaactgcccctttcttcttctctccattcactgaagttctcg
tcttgctctggacaacccccacaagatgcagaggatcgagcaggtggtggcgatttggct
gagtccttgactagactcatcctggaggcagaccctgctataactgtggttggggcagct
gagattccccgtgggcctcccaacgcctcaggatctgacctacctgctctgcaggtgcag
gaccaagccagagtcttgccccagccatccatcatcccacatcccacccaaccacaccag
catccccatcagctccagctgctgccgcggccctccacctcaggcctttcctctggcccc
cctcctccatctatgctcagctaccagcagcagcagcacctgctgcggcgagggaccgca
cccattggccaggtgagctctgacaacatctgggagaacactctgggttttggtcctgtc
agcgtcacccctcgactggttccacacgtggaggacagtccgctgatgtctatcatcaag
gaggtggggctccccaaacgatctcctcagtgcaggaacgatgacggtcaggacttgtca
gagagggtcccgcctccacgttcttcctctcctgtgattggctcccctccggtgagagca
gtgcctatcgggaccccacccaagcagcccatgagccacgtcctgaatcatcagatccac
catcccatggcggtccatgtgagggcgccagtccagcacagataccctcctcctttcccc
gagcgcctgtcacccaacaccctcctcaatatcgccaactcccccctgtgctgcagcccg
ttcccccctggagttggtccagtcctgtctcagattcagcgggcccagctcctcaactcc
caggtggctggttttccccgcggtagtccagcaccttctttgttaccaggtggtggtggt
ttcaggcccttctttgggggccctcctcctccacatggtcaccgaatgggcctccaagca
cctcacggtccttccaaccacgtgccacccatccgacacaacaccacccacctccaccct
cagcaccgtcgcatgcttactcagcgcatgcagaacagggcgtgtgaccgcggtaggact
gggggcgaccgacgcagcagggacccctacagcaacctgatgacccagaaggagaaggaa
tgggtcaccaagatccagatgatgcagcttcagagcactgacccctacctggacgactac
tactaccagaactactatgaaaagatggagaagcgtcaggaaagggagagagacagcagc
aagaaggaacacaccaccaaactgatcactccacaggtggccaaggttgaacactcctac
agaccagttcagtttgcaggttctctggggaagctgaccgtctccagcgtcaacaacccc
cgcaagatgatcgatgctgtggtgacgactcgctccgatgacgaggagaaaagagagaag
caggtttggaatcggagacgtcaggtcctttacacggtggagaagatgtatagtttgctg
ctggaggttcaagactttgagaaacgtttcctccaggctccagaggaggacagggagact
ctgctggagaagcataaagccaacaccatgcagctgtgcacctgtctgagggagaaggag
tgggaggaaagagtgagtgacgagcagtgtgtgatgatcatgtcagtgaggaagggcaaa
cgactcatctctcggctcctcccccttttgccatcacctcaggccaccgccgttgtcatg
gcgattgcccgcaaccttccagctcttgccaagaaggacaaacaggatcaggtgttgtgc
tggctcgtggagccagtttctgcagtgatccaatcattgtcaagctccgccctcacagac
ctgctccaggagcttcaggacaacgatggccagctggccaaagtactgctgaacaagttt
ggggtgacgctgctctacctggtcctgaatgagggggagaggatgcacggcgcccagccc
agctgccagctgatggacgacaatagatggactgagttggtgttttccgtgacgaggggg
ctgctcagtgtcccctcttcatcgctggcgtccccccttgtcctaccccccaacctgctc
cccctcctgtcgcgctacgtcgaccggcccacactggagctgctgcaggagaagctcaag
atttctgcttcgtccaggtag
DBGET
integrated database retrieval system
