Antennarius striatus (striated frogfish): 137600162
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Entry
137600162 CDS
T10427
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137600162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137600162
03009 Ribosome biogenesis [BR:
astr03009
]
137600162
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137600162
Spliceosome [BR:
astr03041
]
Complex A
U1 snRNP components
U1 related factors
137600162
Complex B
137600162
Ribosome biogenesis [BR:
astr03009
]
Eukaryotic type
Pre-60S particles
Helicases
137600162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
137600162
NCBI-ProteinID:
XP_068177708
LinkDB
All DBs
Position
8:21913571..21923298
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AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPPGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDTSHRPLQEVEQYRRSKEVTVKGRDCPKPILKFHEAAFPSYVMDIINKQNWTE
PTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLERGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCSDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLISVLREANQAINPKLIQMAE
DRGGRARGGRGGYKDDRRDRYSGGGRSGFGGSSYRDRDSDRGFGNGPKSAFGGNKAQNGG
SYGGGCSNSSGNYGNNNYGSSNGQGSFGAPANQGGAFGNQSFQSPPQFGGMQRANQNGMN
HPPFPFNSQPPPQGQQAPPPPPMVPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagaccgagatcgtggcagagatagagggtatggtgggggaccacct
cgttttggtggtggtggaggaggcaatcggggtggccctcctccaggaaagtttggcaac
cctggtgagaggctgaggaagaagcactggaacctggatgagcttcccaagtttcaaaag
aacttttaccaggaacatccagataccagtcatagaccacttcaagaggttgaacagtac
cgaagaagcaaagaagtgacagtcaaaggcagggattgccccaaaccaattctaaaattc
catgaagccgcatttccaagctatgtcatggatattatcaacaaacagaactggactgaa
ccaaccccgattcagtctcaggggtggccagttgcactgagtggcaaagacatggttggc
attgctcaaactgggtccgggaaaacccttgcatatcttctgccagcaatcgtacacatt
caacaccagccattcttggagcgtggagatggacctatttgcttggtgctggcgccaacc
cgtgagcttgctcagcaggtgcaacaagtggcagctgaatatggcagggcttcccgtctc
aagagcacctgcatctatggtggtgcacctaaaggaccacaaatcagggacctcgagagg
ggtgttgagatttgcattgctaccccgggacgtctcattgactttctggagtgtggcaag
actaatttgcgtcgttgcacttatctggtgctggatgaagctgaccgcatgctagatatg
ggatttgaacctcagatccgcaagatagtggaacaaattcgaccagaccgtcagaccctg
atgtggagtgcaacctggcctaaggaagttcgccagctggctgaggacttcttgaaggac
tatgtccagattaacattggcgctctgcaacttagtgccaatcacaacatcctgcagata
gttgatgtttgcagcgatatggagaaggaggacaaattgatccgtttacttgaggagata
atgagtgaaaaggagaacaagaccattatctttgtggagaccaaaaggcgttgtgatgag
ctcactagaagaatgagaagagatggttggccagcaatgggaattcatggagacaagagt
cagcaggagagagactgggtccttaatgaattcagatacggcaaagctccgattcttatt
gctacagacgtggcgtcccgtggcttagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaagattatattcaccgcattggacgcacagcccgaagtcaa
aaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagcgacctg
atctctgtgctccgtgaggccaaccaggccattaaccctaagttgatccagatggcagag
gacagaggaggtcgggcacgggggggaagaggtggctacaaggacgaccgtcgggatagg
tattctggaggtgggaggagcggctttggtggtagtagctacagggacagggacagcgat
agggggtttggcaacgggccgaaaagtgcctttggtggcaataaggcccaaaatggtggc
agctatggcggcggttgtagtaactccagtggtaactatggcaacaacaattacggcagc
agcaacggacagggcagttttggtgcgccagcaaaccaggggggggcctttggtaaccaa
agcttccagagcccccctcagtttgggggcatgcagagggccaatcagaatggcatgaac
cacccacccttcccattcaactctcaaccaccaccccaaggccagcaggccccaccccca
ccaccaatggtgccctaccccatgccaccacccttcccacagtag
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