Antennarius striatus (striated frogfish): 137600210
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Entry
137600210 CDS
T10427
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137600210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
astr03009
]
137600210
Ribosome biogenesis [BR:
astr03009
]
Eukaryotic type
Pre-60S particles
RNases
137600210
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
DEDDh_C
DNA_pol_A_exo1
RRM_3
DUF3243
Motif
Other DBs
NCBI-GeneID:
137600210
NCBI-ProteinID:
XP_068177800
LinkDB
All DBs
Position
8:2229159..2234289
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AA seq
836 aa
AA seq
DB search
MDPSSAAATCNRKKRKDVSPAEDESKRFKASQESEAMPESGSSPCSPSITVKQHRLQEPI
TQDDLMELLRYAALGKAGGVKQPSWCRLRHQKKIKAMNVAIVEGVTQSHFYKHYLTLQHL
RTTYTSRVTFTSPSADLASGIFSSEVPESDSLSQRHKEGSPMYRALMSHPVITRFGTQRR
GLTAYVLTQEEMIKKRYPVKGMPGFEEFICTDSVDCVTDSSPLYGIDCEMCLTEKGYELA
RVSVVDAGGNCMLDQLVKPHNRILNYLTRFSGITAAMLRPITTTLRDVQAKLRTVLPSDA
VLVGHSLDNDLKALKVIHMHIIDTSLLYRKDFGQKFKLKVLAETVLKKQIQTEEKNGHNP
TEDALAALELAQYFIKTGPRQVVERHLQELWGYAVTEESADCPPTPVLSHRFADILQSLG
RSVVFYGKRSDVALDPSNQLWHSSDKEVLASFRKQTKRPFLSVLQFSSYSDQLKSPPPPQ
EQRYPRLCVGLRDMCVVFAGPFPAAFSERDVRRVFRCCGPIHKVQMLTSAVRVHAEITFK
LLEGAVLARRTLNGLSIQRQPIKVTLFILSVGAFLHRCIPNMHLFQVQRPVCGSTLDLDV
TLDALMIDGLTASNVYAVKLDASVAESVNVPPKINGHPHAAVDAARPQLAAGKAQMSEKE
VKEVFSRFGPVERVVLLAKPGRRATHAYIAFETSEDKQAALSSSEALWKHDYLICPALTP
PHLPSWVAMTTPNAAADNEERTQAYDASQAVGQQEMDLLRKMDRRLEKLFRSLPDDTLSV
VVLVGCTSAPHPIPGLCLMEVKQRFLRTATWERRAPPTRLSRPVIPDHDTKLEPLI
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcatcagcagcagcaacatgcaatagaaagaaaagaaaggatgtctcccct
gcagaagatgagtccaagagatttaaagcatcacaggaaagtgaggcgatgccagagtct
ggaagttccccctgctcgccgagcatcactgtaaagcagcatcgcctccaggagcccatc
acccaggatgatttgatggagctgctgcgttatgctgctctggggaaagcaggcggcgtt
aagcaacccagttggtgtcgactccgccatcagaagaagattaaagccatgaatgtggcg
atcgtggagggtgtaacccagagccacttttacaaacactacctcaccctgcaacacctc
aggaccacttacacctctagggtcacctttacttcgccatctgcagacttggcctctgga
atcttcagcagcgaagtgcctgaatcagattctctgtcccagagacacaaggaaggcagt
ccgatgtacagagccttgatgagtcacccagttatcaccaggtttgggacacagaggaga
ggacttacagcgtacgttctaacccaggaggagatgatcaagaaacgctatcctgtcaaa
ggaatgccgggttttgaggagttcatttgcacagacagtgtcgactgtgtgactgacagc
agccctctgtatggaatcgactgtgaaatgtgcctgacagagaagggatacgagttggct
cgcgtttcagtggtggatgctggtgggaactgcatgctggaccagctggtgaaacctcac
aatcgcatcctcaactacctcaccaggttctctggtatcaccgcggcgatgttgcgacca
atcacaaccaccctgcgagatgttcaggccaaactcaggactgtgttaccaagtgatgcg
gttctggtcggtcattctcttgacaacgacctcaaggctctgaaggtgatccacatgcat
ataatcgacacctcgctgctgtacaggaaagacttcggacaaaagtttaaacttaaagtt
ctggctgagacggtgctgaagaaacaaatccaaacagaggaaaagaatggtcacaatccc
actgaggacgctctggccgctctggagctggctcagtactttattaaaacgggtcctcgc
caggttgttgagcgccacctgcaggagctgtggggatacgcagtgacggaggagtccgcc
gactgcccacccacacccgtcctgagtcacaggtttgcagacatcctacagtcactcggc
cgatctgtagtcttttacgggaagcgttccgatgtggcgttggatccgtccaatcagctg
tggcacagctccgacaaggaggtgttggcgtctttcaggaaacagaccaaacgtccgttc
ctctcagtgctgcagttctcctcctactcagaccaactgaaaagtcctccccctccccag
gagcagcgttacccgaggctgtgtgtaggcctgcgggacatgtgtgtggtgttcgccggg
ccgtttcctgcagctttctctgagagggacgtgaggcgggtgttccgctgctgcggcccc
attcacaaagttcagatgctgacctcagctgtcagggttcatgcagaaataaccttcaag
ctgctggagggggccgtgctggctcgaagaaccttaaatgggctgagtatccaacggcaa
cccatcaaggtaaccctgttcatcctttctgtcggagcatttctgcaccgctgtattccc
aacatgcacctcttccaggtccagaggcccgtttgtgggtccacgctggacctggatgtg
actctcgacgccctgatgatcgacggtctcaccgccagcaacgtctacgccgttaaactt
gacgccagtgtggcggagagcgtcaacgttcctccaaagatcaacggacacccccacgct
gcagtcgatgctgcgcggccgcagctcgctgccggaaaggcccaaatgtccgagaaggag
gtcaaagaggttttcagtcgcttcggcccggtggagagagttgtgttgcttgctaaacct
ggaagacgtgcgacacatgcttacatagcgtttgagacttcagaggacaaacaagcggcc
ctgagctcctccgaggccctctggaagcacgactacctcatctgtccagctctgacgcca
cctcatttaccatcatgggttgccatgacaacgccaaacgctgcggcagacaacgaggag
aggacccaggcgtacgacgcgtcgcaggctgttggacaacaggagatggatctcctcagg
aagatggaccgccgcctagagaagctgttcaggtccctcccagacgacaccctgtcggtg
gtggttctggtcggatgcaccagcgctcctcatcccattcctggtttgtgtctcatggag
gtcaaacaaaggttcttgagaacagcgacctgggaacgacgggcgccgcccacacgtctg
tctcgtccagtgataccagatcatgacacgaaattagagcctctgatttaa
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