Antennarius striatus (striated frogfish): 137600511
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Entry
137600511 CDS
T10427
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137600511 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137600511 (fip1l1b)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137600511 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
137600511
NCBI-ProteinID:
XP_068178280
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Position
8:19888114..19900406
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AA seq
553 aa
AA seq
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MSAEEGDKTSGADASAGDEEEEWLYGDESESKDEEEEAKLNAAVGTPAEASTEEAATHPM
GNGVASETTGEGAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYIPYGAPPVNLNIKSTG
SRPYGQGTKLKGVDMDAPGSINGVPVQEVEMESFEEKPWRKPGADLSDYFNYGFNEDTWK
AYCEKQKRLRMGLEVSNVSSVTSKITVQQGRTGNEKDLSSLPVHTSKPDFTSPSSLYKSA
ITQVTRISPPQWTGPPLPDMSYYTKTSGTIDVIGGQTATISRVEGRRRHNLDGNNIQVIA
EQTDAEPTPAKIPAFFPPGPLPPNIPPPPFLPPPPNVSAAPPLIPPPRLPITVPPPGFPP
PPSGPPPAIIPTLESAHPAGYDGRSVPSYPFPQGAYPPPMAGGGPPPWAPMMDNSKPWDY
YSRRDDKRDKERDRPRERTHEREREREHSPSAISYTSDEERYRYREYQERGYGERHRDRA
SREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEDADSHRRHKHKKSKRSKEGKEASE
EISADQENQEAME
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaagaaggggacaaaaccagcggcgctgatgccagtgctggagacgaggag
gaggaatggttgtatggagatgaatctgagagcaaagatgaagaggaagaagccaaactg
aatgctgcagtcggtacaccagctgaagcttcaacagaggaagctgctacacatcctatg
gggaatggagtggcctctgagacaacaggcgaaggtgctggtgaggatgtagacagcgac
agtgacagtgatgatgatgatgatgatgtccgtgtcaccattggagacataaaaactgga
gcaccacaatatataccatatggagctccacctgtcaatctcaacataaagtcaacaggc
tccagaccgtatggacaaggaaccaaattgaagggagtagacatggatgcacctggaagc
attaatggggttcctgtgcaggaagtagaaatggagtcttttgaagagaagccttggaga
aagccaggagccgatctgtctgactattttaactatggtttcaatgaggacacatggaaa
gcttactgtgaaaaacagaagaggttgcgcatgggcttggaggtgtccaacgtcagctca
gtgaccagcaagatcactgtccagcagggcaggacaggcaatgagaaggacttgtccagt
ttgccggttcacacctcaaagccagacttcacatctccttcaagcttgtacaagtccgcc
atcactcaagttaccaggatctctccccctcagtggactggccctcctcttccggacatg
tcgtattatacgaaaacgagtggcaccatagatgtgattggcgggcagacggccaccatc
agcagggttgaagggcgacgcagacacaatctggatggcaacaacatccaggtgatcgct
gaacaaacagatgctgagccaactccagctaagatacctgccttcttccctcctggacca
cttcctcctaacatcccacctcctcctttccttcctcctccaccaaatgttagcgctgca
cccccactcatccctccacccaggttgcccattactgtccctcctcctggttttcctcct
ccacccagtgggcccccacctgccatcattcccactctggagagtgctcaccctgcaggt
tatgatggacgctccgtaccttcctacccattccctcaaggtgcgtatcctccacccatg
gctggaggtgggcctcctccttgggcccccatgatggataactctaaaccttgggactac
tattcccgtcgagatgacaagagagacaaggagagagacagacctcgagagaggacacat
gagcgggagagagagagggaacacagcccctcagctattagttacaccagtgacgaggaa
cgctatcgttaccgtgagtaccaggagcgtggttatggagaaagacatcgtgaccgggcg
agcagagagaaagaagaaagacacagagagaggcgacatcgagaaaaagaagaaggacga
cacaagtcatctcgcagcagcagtagcaggagaagacatgacagcgaggatgccgacagt
caccggagacacaaacacaagaagagtaagaggagcaaggagggcaaagaggcgagcgag
gagatcagtgccgaccaagagaaccaggaagccatggagtag
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