Antennarius striatus (striated frogfish): 137600810
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Entry
137600810 CDS
T10427
Symbol
slx4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
137600810 (slx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
astr04121
]
137600810 (slx4)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137600810 (slx4)
Ubiquitin system [BR:
astr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
137600810 (slx4)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137600810 (slx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
137600810
NCBI-ProteinID:
XP_068178730
LinkDB
All DBs
Position
8:17835072..17848705
Genome browser
AA seq
1698 aa
AA seq
DB search
MDDSALDFVDLRSKLLKRNRKKPLEPRQSKKTEHQSCQAGDGVKRGRSKEARRSKCAGTQ
PLCRDAEQPVVCEGTGFDSAEAWSSAGLRAEQSLMAKDKVLLKMQQFRRSSPQRLLHTER
SLAQNPEDDSDPSSHLIQRQESFSADISPEPEDSDEALALQLQQELNREAAQVQTADLED
EGLFFCHICHRNLSHMTSDGRLQHLNRCLDHSEKSASAPALLPPPPPPPRVPDCPICGKN
FKSQKSRLTHLKRCSSDMGVTPAVLLQALQRQADETKNTNTLTEIGSAKRKRPANPSQKK
PKKKAEPLDEDTMVALALSSSMLEQEREPERPVQKEANAALKWRPAADKGCGKRKRQAIF
RPPPFLLVQNAETALTKLQERVSALLVISRSPSPPTPTRCTSSLPGWSGFAPLWQKSTLM
DEGSTCQSDFYTPELREFIAPWKSATSDSFTYANDKHEPVQSTSEGTLVVGTMASTLQNV
ASTPGTAQLPLKSQTLRHPMELADHSMTLSQCAYTDSRPDKEQNTSLVPDLELNSFVRDK
SQKQADLCVSKFLPKNSFIPSVNTNPETRQTDKRAVNDHLRHPSVALSRLASDLSSMVNN
PQLCDVQLQVDTGEVYFAHSFMVYARCPLLAEMVHECGFGVQEDGMHAAQRVLISEVPAQ
AVLAFLHYLYTASCSIPASLLPHVLELACRFDLQELQQLCSQNYASTFGDEETYLNQEDN
VTNQTDQEFMALLISMWNEDESTDVDERKAFEKDCHTNEFTTDETEICEENVNEEELEEI
YEFSATQKKKGEEKEDDDLVEDEGGKEVFTTLTESRSSSTSFLVKKIQNCEDGEASLLHS
TSGQPKMYIPKLQNHHSTQTPSSKLSNKSLNHSSASAIDDLSVSLPPASSLPAAGLSVGQ
GTATLDMSKGLPFMSECQGPHSPESQQIKKEPELIVLSDSSDETDVLLCCHSPSHHSPQT
VKNLQRQTQIKTQPVPKPNKSSHDNSSSNLEFSPETPFAQIQTCNQSTLECSPELSWLIP
NTPLQHGQSTTTSSTQTRSRMCRTKLFPQGDDLQPSLSVLSPPLPLNRLQTSHSSTTDPS
QIKPTEDCIPRIKLQETVSCSSSFDLSFCPTVTNSCDVAEVKQINTLTTSQSKFPHLSSS
TSSKEVTPCYIQAQPCSSTPLHTELHLSPAPLATSMLNSNLDKRRTRQGRDKVPTETSPE
RTELGSFHLSLLSDPSDQSVSYSNRGIKISQRHSDSSHRSGQSEFSSCDNTGSNPVRSDI
TDELGQSEAAEETRLTEHDVRHSFMTRDDPPIAFNDSWALDVCLDANLKDEQELSLSQQQ
TDMLCSSVGFQPSPPGDSIPLLNSLCPVADSSTPKVHSLQPSRLVSPDLTTQNTPEDSKS
LLDSKIWDAWEEEEVEEVETQTLPLSQRLNPSAQLKTPAPVHKSSGEHRHCLYDCVSSAS
SHTKRRTLVPITPMPHYSDMDTPELKNKLSRFGVRPLAKRQMILKLKEIHQYTHQLESSD
SDDGTSSAGCTAKMTLQPTNLVIAGKKPHFCAQTMKLKDPIAPAFTSPLKDKEEGNQSAS
QSFDTVSSGTIEESESRSNPELCHSSDDESESDVTPSQKRTCLRAVQSFILSDPELYTQI
LQYQPLVLSQLHKRLKASGIRLSSAKLMDFLDSQCITFTTAKPSHSAPGCRRGKKMGRGA
KAVNESKRCKESSVTAIH
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggatgactcggctctagatttcgtcgatctccgctcgaagctgctaaaacgaaatcgc
aagaaaccccttgagcccagacagtcaaagaagacggagcaccagtcctgtcaggcaggt
gatggagtcaagagggggagaagtaaagaagctcgtcggtccaagtgtgctggaacacag
cctctttgcagagatgcagagcagcctgtggtctgtgaggggactgggtttgattcagcg
gaggcctggtcgtcagcaggactgagagctgagcaaagtttgatggcaaaagacaaagtt
cttctcaaaatgcaacagttcaggagatcctccccacagaggttgttgcacacagaaagg
agcctggctcaaaaccctgaggatgacagcgatccttcatcacacctgatacagagacaa
gagtctttcagcgcagacatcagcccagaaccagaggacagtgacgaggctctggccttg
cagctgcagcaggagctaaacagggaagcagcacaagtccagacagcggacctggaggat
gaaggcctcttcttctgtcatatctgccacagaaacctgtcacacatgacctccgatggg
cgattacagcacctcaacagatgtttggatcacagtgaaaaaagtgcctcagctcccgct
cttcttcctcctcctccccctccacctcgtgtccctgactgtccaatatgtggcaagaac
ttcaaatcccaaaagagtcgcttgactcacctgaagagatgttcttcagacatgggtgtg
actccagctgtgctgctgcaggctttacaaagacaggctgatgagactaagaacacaaac
acacttacagagattggaagtgctaaaagaaagagaccagccaacccttcacagaagaag
cccaaaaagaaggctgagcccttggatgaagacactatggtagccctggctctgtcttcc
tccatgctagaacaagagagagagccggagagacctgtacagaaagaggctaatgcagcg
ttgaagtggaggccagctgcagataagggatgtgggaagaggaaaaggcaagccatcttc
cgacctcctcctttcctccttgttcagaatgctgagacagctctgacaaagctgcaggaa
cgtgtttctgctcttcttgtaatcagccggtccccctctcctcctaccccaacccgctgc
accagcagtctgcctggttggagtggatttgcccccctctggcagaaaagcacactaatg
gatgaaggttccacctgtcagtctgatttctacaccccagaactgagggagttcatcgct
ccttggaaatcagcaacaagtgattcgttcacatacgcaaacgacaaacatgaacctgtt
cagtcaacaagtgaaggaacccttgtcgtaggaaccatggcatccacattacaaaatgtg
gcatctactccagggacagcacagcttccactgaagagccagacactccggcacccgatg
gagctagctgaccatagcatgacactctctcagtgtgcctacactgattcaaggcctgac
aaagagcagaacaccagtttggtcccagacctcgagctgaacagctttgtacgggacaag
tcacagaagcaagctgacctctgtgtgagcaagttccttccaaagaactcgttcattccc
tcagtcaacaccaaccccgaaacaagacagactgataagcgagcagtgaatgaccattta
cgccacccatcggtggcgctgtccagacttgcatcagatctgagcagcatggtgaacaac
cctcagttgtgtgatgtgcagctccaggtggacactggagaggtctactttgctcattcc
ttcatggtttatgctcgctgccctctgctggcggaaatggtacatgaatgtggttttggg
gtgcaggaggatggaatgcatgcagcccagagggtgttgatcagtgaagtaccagcacag
gcagtgcttgcttttctgcactatctctacacagccagttgctcgatccctgcatccttg
ctgcctcatgtcctggagcttgcatgcaggtttgacttgcaggaacttcagcagctttgt
agccaaaattatgcatcaacttttggagatgaggaaacctacctgaaccaggaagacaat
gttaccaaccaaacagaccaggagtttatggcgctcctgatctccatgtggaacgaagat
gagagcacagatgtagatgaaagaaaagcttttgaaaaagattgtcacacaaatgaattc
acaacagatgaaacggagatatgtgaagaaaacgtgaacgaagaagaactggaagagatc
tatgagttttctgccacacagaaaaagaaaggagaagagaaagaggatgatgatttggtt
gaagatgaaggtggaaaagaagtgttcacaacactgacagagtcaagaagcagctccaca
agcttccttgtaaaaaaaattcagaactgtgaggatggagaggcctcgttgctccactct
acctctggccagccaaagatgtatatccctaaattgcaaaatcatcactcaactcaaaca
ccttcatctaaactgtctaacaaatccttaaatcattcttcagcaagtgcaattgatgac
ctttccgtcagtctcccacctgcatccagcctgcctgctgcaggtctgtccgtgggtcaa
ggtactgctaccttggacatgtctaaaggtcttccttttatgtcagaatgccaaggtcct
cattctcctgaatcacagcaaataaagaaagaacctgagctcatagttttgtctgattca
agtgatgagactgatgttctactttgttgccacagtccttcacatcattctccacaaact
gtcaagaaccttcaaaggcaaacccagatcaaaactcaacctgtcccgaaacctaataaa
tcctcccatgacaatagttccagcaacttagagtttagtcctgaaactccatttgcacaa
attcaaacatgtaatcagagtactttggaatgttctccagagctttcctggctgattcca
aacacaccactccaacatgggcaaagcaccacaaccagttcaactcagacgagaagcagg
atgtgtaggacgaagctcttccctcaaggtgatgatttacaaccgtcactctctgtttta
tctcctcctttaccactcaacagacttcagacctcacacagttcaaccacagatccgtcc
caaatcaaaccaacagaagactgcattcccagaattaaattgcaggaaacggtttcttgt
tcctccagctttgatctaagtttttgcccaacagtaaccaatagctgtgatgtggctgaa
gttaaacaaattaatacactaaccacaagccagtcaaagttcccacacctgtcaagttct
acttcctctaaggaggtcaccccttgttacatacaggcccagccttgcagcagcactccc
ctgcatactgagctccacttgtcccccgctcctcttgccacctccatgctcaacagtaac
cttgataagcgcaggacaagacaagggagggataaggtaccaactgagaccagcccagag
agaacagagttggggagttttcatctttccctgctgtctgacccttcagatcaatcagtt
tcttactcgaacagaggtattaaaatatcacaaaggcacagtgactcctctcatcgaagt
ggacaatcagagttcagcagttgcgacaacacagggtctaatccagtaaggagcgacatc
actgatgaattggggcagtcagaagcagcagaagaaaccagactgacagaacatgatgtc
aggcatagtttcatgaccagggatgacccccccatagctttcaatgactcatgggccctt
gatgtctgtttagatgccaacctgaaggatgagcaggagctaagtctgtctcagcaacag
acagacatgctttgttcctctgtaggcttccagccttcaccacctggtgacagtatccct
ttattgaatagcttgtgccctgtggctgactcctctacacccaaagtccacagtttacaa
ccatccaggctagtatcacctgatctgacaactcagaacactccagaggacagcaaaagc
ctcctggactcgaaaatatgggacgcctgggaagaagaggaggttgaggaggtggagact
caaactctccctctttcgcaaaggttgaatccttctgctcagctcaaaacacctgctccc
gtgcacaaatccagtggtgaacacagacactgtctttatgattgtgtctcatcagcatca
tctcacacaaaaaggcgtacattggtgcccatcactcctatgccccactactctgacatg
gacacgccagaactcaagaacaaactcagcagattcggtgttcggcctttggcaaagcgc
cagatgatccttaaattgaaggagattcatcagtacacccaccagctggagagttcggat
tctgatgatgggacctcatctgcaggctgcacagccaagatgacgctccaacccactaat
ttggtaatcgctggcaagaagccacacttctgtgctcagacaatgaagcttaaagatccc
attgcgccagctttcacatcccctctaaaagacaaggaggaaggcaatcaatctgcctca
cagtcctttgacaccgtttcaagtggaacaattgaagaatctgaaagcaggtccaaccct
gagctgtgccactcctctgatgacgaatcagaaagtgacgtcactccctcccagaaaagg
acatgcctccgtgctgtgcagtccttcattctgtctgatccagaactgtacactcaaatc
ctccagtaccagcctttggttctgtcccagctccacaagcgacttaaggcatccggaatc
cgcttgagttctgccaagttgatggattttctggactcccagtgcattacttttaccact
gccaaaccgagccactctgcacccggatgcaggcgaggaaagaagatgggcagaggagca
aaggcggtgaatgaaagtaaaagatgcaaggaaagcagtgtcacagcaatccattga
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integrated database retrieval system
