Entry
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
KO
K20780 mediator of DNA damage checkpoint protein 1
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:astr00001 ]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:astr03400 ]
137601159 (mdc1)
DNA repair and recombination proteins [BR:astr03400 ]
Eukaryotic type
Check point factors
Other check point factors
137601159 (mdc1)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
9:17520310..17529824
Genome browser
AA seq
1950 aa AA seq DB search
MDATQMINDSILESDEEDKEEENENKRGQPMAKLCILKNKHITESELPLFLGDNILGRDP
GICTVHLPSPSISKQHATISISVLRRRGCLSEADMEALIWDLGSMNGTRKGHFKLTPNVR
YALSESDSLMVADIPCQFFICATQTQTPEHLKTPLSRTSGMKSKLLNAPCEKGSDISTGS
ENYTYGSTETRDATLDVEDTSKTPVRTSCLTFEQTPIQPEGTLVPESDSESCANREKRGG
RRCRNEVCECDSYKSSPTCSTFLSPSNIIVPESEDESPISTNVGRHRHVSFSKDEPEKDV
RRLQLREKKTLANMDDSEGEEGKEEDSAAPGGRMSTESGQDQSVTPAVPVTLSTHQQADL
PSDIPKFHMDSDTDIDEDDDASDKVPKSVPSLDETSSNIKPPHVITVIQSEAIAMDSDTD
VDEDAEKENGTIHRGSREDETPSRLDIKSALPEAASVMPHSLHLDSITDDEIISVPCQIT
HSADSALSKQQKDFHLDSDTDVDEEEEKFGTITMCAKKDETPLSFSIEPTERDSAPAASH
SLHSDNYIDDKAIPAPGIREAPVLSAVTESCTAAETGTELDILSDSDTDAEDEVIPGAVT
TPAFSPVTAPAALLAGSDADTDVDESTRLSLEDRVDLADRHVDSHTDAAVEEVDFCRPRQ
DQIPNLCRENTPGMLVPLLQNCSTPVQLSDNQEDEDWIVAETQSFVLQTSDCRGDAPVDH
TMDSTQAFCIESSIDEEVDQANGGGSFQLGLSDSSHMQSQAHVVATESTQTYVSAQNTQQ
YAAISTDDRTASENHFSLEATQVYEENEGQFCCLVTSEKENQVDLAQEATQAYISEPYCG
SDDETNKDETTEIATAETQLLDIATSSTLAFAETQPMSAFEEGDGLEVENPVSSIQVQFS
LQNQIKNTEDHVEATRRPLQIDIAETQLMSGNEEGDQEDTTPGTWKNKEEETQTLTNSAL
PAVEAQSTDMGKPAESDEEDLIQSRSKRKAKPLQPEENETQTQGNVDVTAVETQPMDTSE
HGESDKEDSFPGPRKRKAKQLHFEDEQTQSLMRSEVSVVVGKDRKCDDEESIPSLRKRKA
KALQTREEEKPLTHSEAAAETIEIKKCQQPQKGSEGESEDGTSGITTRGKRATRSQLKEK
EERAKCSEPSKRQTKNKVLSVSKSRSDESARDGVEEIVQTKQVRGKRTLTKQKDDEEEED
KEPNRHNQGENVSLMKEEGRLQSGEDFTEQMEKEKREGNEREREQEENHCQIEEQEKLER
ERKEEEEKVRKQLENEDLEQERANERKDQEHQRKHETEANEMQDSGNLETEKQRETKENQ
REAQEEKMEEESTSKGPVRSRRTTRRTIAEQASTLSTNDDVPARRTRSRSNSSNSVNSER
SASSVQDSRGRGRGRGAKTTSEPPQTAIARRSNRRKTVATEAEEQNSNDSLQGLPLRSDS
NNSLSADISSSGAQSRGRGGKHNARGRKSEACSIPPIASEKDQNPAPKPTARSRVSRKTE
ESSRKDPPEQPEDKAESQQARTTRGRWQGKRNDGEPEAEEKSSNLEGGCSREESCLPKGN
VSARGQKAVKHEAVAAPVMLAVHDEDDSKEKRKGRKRELEANVDEASTSHSKISKPQEKA
QAAHAAEDDGKGEAEDVIPVQGQRRGRTSSAQGKKLAKNSQTAVQVKEEKVTIEEVIVEK
RGRCRQPSVVEEKQTEHPQTPSSSGSRKRQAPVESSPVAKTRRSSSASPAASGRLQTARQ
TYKVLFTGVVDEEGEKVLAHLGGSMAKGVEDMNCLVTDKVRRTVKFLCAVAKGVPIVTTN
WLEKSGKAGSFLSPDAFIVKDPEQERKFNFCLQESLRTASSQPLLQGYQIHVTKSVKPEP
PHMKDILTCSGATFLSKMPTSNKPQTVVISCEEDLQLCCPAFCASLPVVTAEFILTGILQ
QKLDLQTYRFSALTINLQPAVGRGKSRKKI
NT seq
5853 nt NT seq +upstream nt +downstream nt
atggatgcgactcaaatgattaatgactccatcctggagtcagacgaggaagacaaagaa
gaggagaatgaaaacaagagaggacaaccaatggctaaactttgcatcctaaaaaataaa
cacataactgaatcagagttaccactctttttgggagacaacatattgggccgtgatcct
ggcatctgcacagtgcacttaccatctccttcaatatccaagcagcatgctaccatcagc
atctctgttcttcggcgaagaggctgtctgagtgaggcagacatggaggctttgatttgg
gacctcggaagcatgaatgggacacgcaaaggccacttcaagctgactcctaatgtacgc
tatgccctcagtgaaagcgacagtttgatggtggcggatatcccatgtcaatttttcatc
tgcgctacacagacacaaactccagagcatttgaagactcctctgagcagaacatcaggg
atgaagagcaaattactaaatgctccttgtgaaaagggaagtgacatcagtacaggcagc
gagaattatacctatggaagtacagagacaagagatgcaacacttgatgtagaggacaca
agcaaaactcctgttagaaccagttgcctaacctttgagcaaacacctatccagccagaa
gggacccttgttccggaatctgattcagaatcatgtgcaaatagagaaaaacgaggtggg
aggaggtgcagaaatgaagtgtgtgaatgtgactcctataaatccagtcccacttgttca
acattcttgagtccctcaaacataattgtccctgaaagtgaggatgaaagtcccatctcc
actaacgtcgggcgtcacagacatgtcagcttcagcaaagacgagccagaaaaagatgtg
aggcgactgcagctgagggagaaaaagacacttgcaaatatggatgacagtgaaggagaa
gaaggcaaggaggaagacagtgcagcaccaggggggagaatgtctacagaaagtggacaa
gatcaatcagtgacacctgcagttcctgtgaccttgagtacacatcagcaagcggatcta
ccatcagacatacccaagtttcacatggacagtgatacagatattgatgaggatgatgat
gcctcagacaaagtccccaaatctgtgccttctctggatgaaacatcatccaacatcaaa
cctcctcatgttattacagtcatccagtcagaggccattgctatggacagtgacacagat
gttgatgaagatgcagaaaaagaaaacggaacaattcatagaggctctagagaagatgaa
actccctctagattagatatcaagtcagcgttgcctgaagcagcctctgtcatgcctcat
agtctgcatttagacagcatcacagatgatgagattatttctgtcccctgtcagatcaca
cactcagctgactctgctctttcaaagcagcaaaaagattttcacctagacagtgacact
gatgttgacgaggaagaagaaaaattcggaacaatcactatgtgtgctaaaaaagatgaa
actccacttagtttcagtattgagccaactgagcgtgactctgctcctgctgcttctcac
agcctgcattcagacaattacatcgatgataaagcaattcccgctcccggcattagagaa
gccccagtgttgtctgctgtcacagaatcatgcaccgctgctgagacaggaactgagtta
gacattctttctgatagtgacacagatgctgaggatgaggttatacctggtgctgttaca
actccggcttttagtcctgttactgcaccagcagctcttctggcagggtctgatgcagac
accgatgtggatgaatccaccaggctttctttagaggacagagtcgatctagctgaccgt
catgtggacagtcacacagatgctgcagttgaggaggtggacttttgcaggccccggcag
gaccagattcctaacctgtgcagagaaaatacccctgggatgctggttcctcttcttcag
aactgctccactcctgtacagctgtcagataatcaggaggatgaggactggatcgtggct
gaaacacagtcctttgtccttcagacaagtgactgccggggcgacgctccagtggaccac
accatggactctacccaggctttctgcattgagagttctattgatgaagaagttgaccag
gccaacggagggggatcttttcagctgggattgtctgacagcagtcacatgcagagtcaa
gcccatgttgtagccacggagagcacccaaacttatgtctctgcacaaaacacccaacaa
tatgcagcaatctcaacagatgacagaaccgcctcagagaatcatttcagtctggaggct
acccaggtttatgaagaaaatgagggacaattctgttgtttagtaacatctgaaaaagaa
aaccaagtggatttggctcaggaagcaacacaagcatatatctcagagccctactgtggt
tcagatgatgaaacaaacaaggatgagacaacagaaattgcgactgctgagactcagctt
ttagacattgctacctcatctactcttgcctttgctgaaacccagccaatgtctgccttt
gaggaaggagatggtttggaagttgaaaatcctgtttcctcgattcaagttcaattcagc
ctgcagaatcaaataaaaaacactgaagatcatgtggaggcaacgaggaggcccttacag
attgatatagctgaaactcagctcatgagtggaaatgaagagggtgatcaagaggataca
acaccaggcacatggaaaaacaaagaagaggagacacaaactcttacaaattctgcactc
cctgcggttgaagctcagtcaacggacatgggaaaacctgcagaaagcgacgaagaggac
ttgattcaaagtcgttcaaaaagaaaggcaaaaccgctgcaacctgaagaaaatgagaca
caaacacagggaaatgttgatgtcacagctgtggaaactcagccaatggatacaagtgaa
catggagaaagcgataaagaggattcatttccaggtccacgaaaaaggaaagcaaaacaa
ctgcattttgaagatgagcagacacagtccctcatgagatccgaggtgtccgtggtcgtg
ggtaaagacaggaaatgtgatgatgaggagtcaattccaagtctgcgaaaaagaaaagca
aaagcacttcaaacccgagaagaggagaaaccgctcacacattctgaggctgctgctgaa
actatagaaataaaaaaatgccagcagcctcaaaagggaagtgaaggagagtctgaagat
ggaaccagtgggatcactactagaggtaaaagagcgacaaggtcacaattaaaagaaaag
gaagagcgggcaaaatgttctgaaccttccaagagacagacaaaaaacaaagttttgtca
gtgagcaaatcaaggtctgatgagagtgcaagagatggcgtggaggaaatagtgcagact
aaacaagttagagggaaaagaaccttgacaaagcagaaagatgatgaagaggaggaagac
aaagagcccaacaggcacaatcaaggtgaaaatgttagcctgatgaaggaagaagggaga
ttgcaaagtggagaggattttacagaacaaatggagaaggaaaagagagagggcaatgaa
agagaaagggaacaggaagagaatcattgtcagatagaagaacaagaaaaattggagagg
gaaagaaaagaggaggaagaaaaagtaagaaaacagcttgaaaatgaagatcttgagcag
gaaagagcaaatgaaaggaaagatcaagaacaccaaagaaaacatgagactgaagcaaat
gaaatgcaagacagcggaaatctggagacagaaaaacaacgtgagaccaaagaaaatcaa
agagaggcacaagaagaaaaaatggaagaagaaagtacgtctaaaggtcctgtgagaagc
cgaagaacaaccagaagaacaattgctgaacaagcctcaaccctgtcaaccaacgatgat
gtcccagcaagaagaaccagatcacgttccaactcatccaactctgtcaactcagagaga
tctgcttcaagtgtccaggacagcaggggtcgaggcagaggcaggggagcaaagacgacc
agtgagccgccacagacggccatcgccagaaggagcaacagaaggaagacggtggctaca
gaggcagaagaacagaacagtaatgattctcttcagggactccctttgagatccgactcc
aacaactctctcagtgcagacatttcaagctcgggtgctcagagcagaggaagaggagga
aagcataatgcgagaggaaggaaatcagaggcctgctcaatccctcctatcgctagtgag
aaagatcagaatccagctcccaaacctacagccagaagcagggtgagcagaaaaacagag
gaatcttcacgcaaggatcctccagaacagcctgaagataaggctgagtctcaacaggct
agaaccacaagggggcgatggcaaggcaaaagaaatgatggtgaacctgaagctgaggaa
aagtcttcgaatctagagggaggatgttccagagaagaatcatgtctgccgaaagggaat
gtcagcgccagaggccaaaaagcagtaaaacatgaggctgtggctgcaccagttatgcta
gctgttcatgatgaagatgattctaaagagaaaagaaaggggagaaaaagagagttggag
gcaaatgtagacgaggcttccaccagtcactccaaaatttctaaaccacaagagaaagca
caagcagcacatgcagctgaagatgatgggaaaggtgaagcagaagatgtgattcctgtc
caaggtcaaagaagaggaagaacatccagcgctcaaggaaagaagctggcaaaaaattcc
caaactgcagtgcaagtgaaagaagagaaagtgacaatagaggaggttattgttgagaag
agaggcagatgtcgtcagccatcagtggtggaggaaaagcagacagaacatcctcagact
ccatccagtagtggatcccggaagcgacaggcccctgtggagtcttcgcctgtggcaaag
acccgtcgctcctcctctgcttccccggcagctagtggtcgattacaaactgccagacag
acctacaaggtgctgttcactggcgtggtggatgaagaaggtgagaaagtgttggctcat
ttaggaggcagtatggccaaaggtgtggaagacatgaactgtcttgtgactgataaagtg
cgcaggaccgtcaagttcctgtgtgcggtggcgaaaggggtccccattgtcaccacaaac
tggctggaaaagagcggcaaggctgggagtttcctgtctcctgatgcttttattgtgaag
gatccggagcaggagaggaagttcaatttctgcctgcaggagtctttgaggacggccagc
agccaacctctgttacagggctatcagatccatgttacaaagtcagtgaagccagagccg
cctcacatgaaggacatactcacctgcagtggagccaccttcctttctaagatgcctacc
tccaacaagcctcagaccgtagtgatttcgtgcgaggaggacctgcagctgtgctgccca
gctttctgtgcatcgctgcccgtcgtcacagctgagtttattctcacagggatcctgcag
cagaaacttgaccttcagacgtaccggttctctgccctcacaatcaacctgcaacctgca
gtaggcagaggaaagagcaggaagaagatttag