Antennarius striatus (striated frogfish): 137601183
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Entry
137601183 CDS
T10427
Symbol
smarcc1a
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137601183 (smarcc1a)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137601183 (smarcc1a)
PBAF complex
137601183 (smarcc1a)
GBAF(ncBAF) complex
137601183 (smarcc1a)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137601183
NCBI-ProteinID:
XP_068179347
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Position
9:23587881..23602343
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AA seq
1124 aa
AA seq
DB search
MATAATTAGGAGSGGAATGPTGSGTAVGRKKDGGPSTKFWESSETISQLETVRLWIGKHY
KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFLDFKAGGALCHILG
SVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVFLSPDIEQKQASK
LKDIIKRHQGSITDDKSKSTHHIYPTPPQQEEEEWLRPVMRKDKQVLVHWGLSPDSYDTW
VSASEVDGDIEDPPSADRPWKVHAKWVSDTDAFNEWMNEEDYEVDDGKKPVNFRQRIFPK
EEESSRTPDRKERKATAAGKKRRRSPSPPSTPAESRKKGGKKGNPGLHWKRRGHRGEEED
TEEDITKDMDDSSAGASIEEGSMTKNASSKRDSENPPVGGPVSDPDDVENDSVLSGGKDD
EEQGKAEVNRLMDAGEDNVTEQTHHIIIPSYSAWFDYNCIHEIERRALPEFFNGKNKSKT
PEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDADS
RPLPMGPPPTPHFTVLADTPSGLMPLNHRPPPVPPQQQMPGFGDKSKDKNIDLQNFGLRT
DLYSRKNPKAKAASSTREWTEQETLLLLEALEMFKDDWNKVSEHIGSRTQDECILHFLRL
PIEDPYLESGEACLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSR
VREEVPAELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPSEAEKMDTD
SDSQQADKAELKDEAEKPSESAEKSGDKTEAGGEKVKKEGLEGAEREEDGEEGSGGEAKA
ASDKDKEDVAMETSSSEQEKEKEEKSPEEGGEEKRKKLEHDIEEGNIATAAAAALASAAT
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTER
QAFHMEQLKYAEMKARQQMEQQAAAAAAAQAHGHAPGSAPHAPPPGMHPGGHQPHHGAPV
PHHGGPPHGGAMHPGYPPMGHHPMAPHHPGQTGPMGPGQPMPGRMMPGPPSAGPPTGGMP
PMMPPRHPGAPNGMYPGPLPAQPEAVPPVPVGPPVPPSARVPDN
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgacaacggcaggcggagcgggctcgggcggagcggccaccggcccg
accggcagcggaaccgcggtgggacggaagaaggacggtggaccttctactaaattctgg
gaaagttccgagacgatatcccagctggagacggtgcggctgtggatcgggaagcactac
aagaagtacgtccagaacgattccccctccagcaagtccttggcgggtttggtggtccag
ctgctgcagttccaggaggacgcctttggacgcagggtcaacaatcctgctctgaccaaa
ctacccgcaaagtgtttcctggatttcaaggcagggggcgctctctgtcacatcttgggg
tcggtctataagtttaagagcgagcagggatggcgcagatttgacctgcagaacccgtcc
aggatggacagaaatgtggaaatgttcttgaacgtggagaagaacttggtgcagaataac
tgcttgactcgacccaccgtgttcctgtcgccggacatcgagcagaaacaagccagtaag
ctcaaagacatcatcaagaggcaccagggctccatcactgatgacaagtccaagtccacc
caccacatttaccccaccccgccccagcaggaggaggaggagtggcttcgtcccgtcatg
aggaaagacaagcaggtgctggtccactggggtctgtctccagacagctacgacacctgg
gtgtcggccagcgaggtggacggagacatcgaggacccccccagcgccgaccgaccctgg
aaggtccacgccaagtgggtctcggacaccgacgccttcaacgagtggatgaacgaggaa
gactacgaggtggacgacggcaagaagccggtcaacttccgccagaggatcttccccaag
gaggaggagtcttcccgtacgcccgatcgcaaggagcgcaaggccaccgccgccggcaag
aagaggaggcgctcgccctcgccgcccagcacacccgccgagtcccgcaagaagggagga
aagaaggggaacccgggactccactggaagcgacgcggccacaggggggaggaggaggac
acggaggaggacatcaccaaggacatggacgactcctcggcgggcgccagcatcgaggag
ggcagcatgaccaagaacgccagttcaaagagagacagtgagaatcctccagtggggggg
cctgtgtccgacccggatgacgtggagaacgactcggtgctctctggcgggaaggacgac
gaggagcagggcaaagcggaggtcaaccggctgatggacgcgggggaggacaacgtgacg
gagcagacgcaccacatcatcatccccagttacagcgcctggttcgactacaactgcatc
catgagatcgagagacgagcgctccccgagttcttcaacgggaagaacaaatccaaaacc
cccgagatatacctggcctaccggaacttcatgatcgacacgtaccggctgaacccccag
gagtacctcacctccacttcctgtcgcaggaacctgacgggggacgtctgtgccatcatg
agggtccacgccttcctggagcagtgggggctggtcaactaccaggtggacgccgacagc
cggcccctacccatggggcccccgcccaccccccacttcaccgttctggccgacaccccg
tctggactcatgccgctcaaccaccgccccccaccggtccccccccagcagcagatgccc
ggattcggagacaaaagcaaggacaagaacatcgacttgcagaactttgggcttcggaca
gacctctacagcaggaagaaccccaaggccaaagcggcgtcctccaccagggagtggacg
gagcaggagacgctgctgctgctggaggctctggagatgttcaaagacgactggaacaag
gtgtcggagcacatcggctcgcgcacgcaggacgagtgcatcctgcatttcctgcggctc
cccatcgaggacccctacctggagagcggcgaggcgtgcctggggcccctggcctaccag
ccaatccccttcagccaatcggggaaccccgtgatgagcaccgtggccttcctggcctct
gtggttgacccccgggtggcatccgccgccgccagggcggcgctagaggagttctcccgc
gtgcgtgaggaggtgcccgctgagctggtggaggcgcatgtgaagaaggtgcaggaggcg
gcgaggagcactgggaaggtggaccccgcattcgggctggagagcagcggcatcgccggc
accgcccccgaggagcccgagaagaccgaaccctctgaggcggagaagatggacacggac
tccgactcccagcaggccgataaggcggagctgaaggacgaggcggagaagcccagcgag
tcggcggagaagagcggcgacaagacggaggccggcggcgagaaggtgaagaaggagggg
ctggagggggcggagcgcgaggaggacggagaggaggggagcgggggcgaggccaaagcg
gcgtccgacaaagacaaggaggacgtagccatggagacgtcgtcctcggagcaggagaag
gagaaggaggagaagtccccggaggagggaggggaggagaagaggaagaagctggagcac
gacattgaggaggggaacatcgccacggcagcggccgccgcgctggcgtccgctgccacc
aaggccaagcacctggcggcggtggaggagaggaagatcaagtctctggtggcgctgctg
gtggagacgcagatgaagaagctggagatcaagctgaggcacttcgaggagctggagacc
atcatggaccgcgagaaggaggcgctggagctgcagcggcagcagctgctgacggagcgt
caggcgttccacatggagcagctcaaatacgctgagatgaaggcgcggcagcagatggag
caacaggccgccgccgcggcagccgcccaggcccacggccacgcccccggctccgccccc
cacgcccctcctccgggcatgcaccccgggggccaccagccgcaccacggagcgccagtg
ccccaccacggggggccgccgcacggcggcgccatgcaccctggataccccccgatgggg
caccaccccatggccccccaccacccggggcagacaggaccgatggggccgggtcagccg
atgcccgggcgaatgatgcccggccccccctccgcagggcccccaaccggcgggatgccc
cccatgatgcccccacgccaccctggagcccccaacggcatgtaccccggaccactacca
gcacagcctgaagcggtgcctccagtccctgtgggtcctcctgtgccccccagcgctcga
gtgcctgacaactaa
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