KEGG   Antennarius striatus (striated frogfish): 137602521
Entry
137602521         CDS       T10427                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
astr  Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:astr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:astr03041]
    137602521 (smu1a)
Spliceosome [BR:astr03041]
 Complex B
  Other components
   Complex B specific factors
    137602521 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_NWD2_C Beta-prop_WDR75_1st LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_BBS7 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_IP5PC_F DUF7165 TFIIIC_delta VPS8_N LisH zf_topless Beta-prop_NOL10_N LisH_PAC1 PROPPIN LisH_WDR26 PA14
Other DBs
NCBI-GeneID: 137602521
NCBI-ProteinID: XP_068181442
LinkDB
Position
10:complement(219440..223403)
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLQRTLSTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMIMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFCKDSSQLLSTSFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHIISASSDGTVKVWNMKTTECTNTFKPLGTSAGTDITVNNVLLLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccctggaggtggagtccgctgacgtcatccgtctgatcatgcagtacctgaaggag
aacaacctgcagcggacgctcagcacgctgcaggaggagaccacggtgtccctgaacacg
gtggacagcatcgagagcttcgtggccgacatcaacagcggccactgggacaccgtcctg
caggccatccagtcgctcaagctgcccgacaagacgctgatcgacctgtacgagcaggtg
gtgctggagctgatcgagctgcgggagctgggggcggcccgctccctgctgcggcagacc
gacccgatgatcatgctgaagcagacgcagccggagcgctacatccacctggagaacctg
ctggcccgatcctactttgacccccgagaggcgtaccccgacggcagcagcaaggagaag
cggcgggcggccatcgcccaggcgctggcgggggaggtcagcgtggtgcccccatcccgt
ctgatggctctgctggggcagtccctgaagtggcagcagcaccagggcctcctgcccccc
gggatgaccatcgacctgttcaggggcaaagccgccgtcaaagacgtggaggaggagcgc
tttcccacccagctcagccgacacatcaagtttgggcagaagtcccacgtggagtgttcc
cgcttctcccccgacggccagtacctggtcaccggctccgtggacggcttcatcgaggtc
tggaacttcaccaccggcaagatccgaaaggacctgaagtaccaggctcaggacaacttc
atgatcatggacgatgccgtgttgtgtatgtgcttcagccgggacacggagatgttggcc
accggcgcccaggacggaaagatcaaggtgtggaagatccagagcggtcagtgtctgcgg
cgctttgaacgcgcccacagcaaaggagtgacctgcctgagcttctgtaaggacagcagt
cagctcctcagcacctccttcgaccagaccatcaggatccacggcctgaagtcggggaag
accctgaaggagttccgcggtcactcgtcctttgtgaacgaggccaccttcactccagac
ggtcaccacatcatcagcgcctcctcggacgggacggtcaaggtgtggaacatgaagacc
acagagtgcaccaacaccttcaagcctctgggcacgtcagcgggcactgacatcacggtg
aacaacgtgctgctgctccccaagaaccccgagcacttcgtggtgtgtaaccgctccaac
acggtggtcatcatgaacatgcagggccagatcgtcaggagcttcagctccgggaagagg
gagggcggagacttcgtgtgctgcacgctgtcgccccgcggcgagtggatctactgcgtg
ggcgaggacttcgtgctctactgcttcagcaccgtcaccggcaagctggagaggactctc
acggtccatgagaaggatgtgattggcatcgcccaccacccccaccagaacctgatcagc
acctacagtgaggacggtctgctgaagctgtggaagccctga

DBGET integrated database retrieval system