KEGG   Antennarius striatus (striated frogfish): 137602793
Entry
137602793         CDS       T10427                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
astr  Antennarius striatus (striated frogfish)
Pathway
astr03013  Nucleocytoplasmic transport
astr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:astr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137602793 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    137602793 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:astr03019]
    137602793 (thoc3)
   03041 Spliceosome [BR:astr03041]
    137602793 (thoc3)
Messenger RNA biogenesis [BR:astr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137602793 (thoc3)
Spliceosome [BR:astr03041]
 Complex C
  Other components
   EJC/TREX
    137602793 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137602793 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML eIF2A DSE1_N Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_TEP1_C RMC1_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_ACSF4 TRM82_WD PAC11 WDR90_beta-prop_4th Beta-prop_WDR75_1st B-prop_COPA_B_2nd Beta-prop_EIPR1 PD40 Beta-prop_NUP159_NUP214 ASA1 Beta-prop_SPT8 Beta-prop_WDR41 Peptidase_S9_N Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_WDR11_1st WD_LRWD1 YNCE MIOS_WD40 PROPPIN TP_0598_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 137602793
NCBI-ProteinID: XP_068181933
LinkDB
Position
10
AA seq 324 aa
MKMASRYYQEMQESFRNNNKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLERD
RLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINI
CWSPDDQTIAVGNKEDVVTFIDAKTHRSRAEEQFKFEVNEISWNNDNDMFFLTNGNGCIN
ILSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDW
PVRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACD
DKEGKYENNREAGTVKLFGLPNDS
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaagatggcttcgcgatactatcaggagatgcaggagagctttagaaacaacaataaa
agccgagaattcccagctcacacagcgaaagttcactcggtggcgtggagctgtgacggc
cggaggctggcctccggttctttcgataaaaccgccagcgtgttcgtcctggagagggac
cggctggtgaaggaaaacaactacagaggtcacggcgacagtgttgatcagctctgttgg
catccatccaaccccgatctgtttgttacggcatcaggagacaagaccatccgcatctgg
gacgtccgcaccaccaaatgcattgccactgtcaatacgaaaggagagaacatcaacatc
tgctggagccctgatgatcagaccattgccgttgggaataaagaggatgtggtgaccttc
attgacgccaagacgcatcgatccagagccgaagagcagttcaagttcgaggtgaacgaa
atctcctggaacaatgacaacgacatgttcttcctcaccaacggaaacggatgcatcaac
attctgagctatccggagctgaagcccatccagtccatcaacgctcacccgtccaattgc
atctgcatcaagttcgaccccacagggaagtactttgccacaggaagtgccgacgccttg
gtcagcctgtgggatgtggaggaactggtgtgtgtacgctgcttctccaggctggattgg
cctgtgaggacactgagcttcagccacgatggcaaaatgttggcgtcagcctccgaggat
cacttcatcgatatcgccgaggtggaaacaggagagaagctgtgggaggtgcagtgtgat
tctcccaccttcaccgttgcctggcaccccaagaggcctctgctggcctacgcctgtgac
gacaaggagggcaaatacgaaaacaaccgggaggcgggcacggtgaagctctttggcctg
cccaacgactcgtga

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