Antennarius striatus (striated frogfish): 137602925
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Entry
137602925 CDS
T10427
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03020
RNA polymerase
astr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137602925 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
137602925 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
astr03021
]
137602925 (polr2b)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137602925 (polr2b)
Enzymes [BR:
astr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137602925 (polr2b)
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137602925 (polr2b)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137602925 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
137602925
NCBI-ProteinID:
XP_068182145
LinkDB
All DBs
Position
10:complement(1395854..1404239)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFDQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEIPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggatgaagataaccagtatgatgaggatgatgatgaaatcactccagac
ctgtggcaggaggcctgctggatcgtcatcagctcttattttgacgagaagggtctggtg
cgtcagcagctggattcttttgatgagttcatccagatgtccgtccagcggatcgtggag
gacgccccccccatagacctgcaggctgaggctcagcacacgtcaggggaggtggaggag
ccgccacgttacctgctaaagttcgatcagatctacttgtccaaaccgacgcactgggag
agagacggagctccgtcccccatgatgcccaacgaggctcgactgcggaacctcacgtac
tccgcccccctgtacgtcgacatcacaaagaccatcatcaaggagggggaggaccagctg
cagactcagcaccagaagaccttcattggtaaaattcccatcatgcttcgctccacctac
tgcctgctgagcggcctgacggacagagatctctgcgagctgaacgagtgtccgctggac
cccggaggttatttcatcatcaacggctcggagaaggtgctgatcgctcaggagaaaatg
gcaaccaacacggtttacgtgttcgccaagaaggactctaagtacgcctacaccggcgag
tgtcgctcctgcctggagaactcgtcccgtcccaccagcaccatctgggtcagcatgatg
gccagagggggacagggagtgaagaagagcgcgatcggccagaggatcgtgtccacgctg
ccgtacatccgacaggagatccccatcatcatcgtgttccgggcgctgggcttcgtgtcg
gaccgcgacatcctggagcacatcatctacgacttcgacgacccggagatgatggagatg
gtgaagccgtctctagacgaggccttcgtgatccaggagcagaacgtggcgctgaacttc
atcggctccagaggggccaaaccgggcgtgaccaaagaacgccgcatcaaatacgccaaa
gaggttctgcagaaggagatgctgcctcacgtcggggtcagcgacttctgtgagaccaag
aaggcctacttcttagggtacatggtccacaggctgctgctggcggctctcggcaggcgg
gagctggacgacagggatcactacggcaacaagaggctggacctcgccgggccgttgttg
gccttcctgttcagaggcctcttcaagaacctcctgaaggagatccggatctacgcccag
aagttcatcgacagagggaaggacttcaacctggagctcgccatcaagacccggatcatc
tctgacggcctcaagtactcgctggcgacggggaactggggcgacgtgaagaaggcccac
caggcccgcgccggggtgtctcaggtgctgaaccgtctcaccttcgcctccaccctgtct
cacctccgccgggtgaactcccccatcggcagagacggcaaactggccaaaccccggcag
ctgcacaacacgctgtgggggatggtgtgtccggcggagacgcccgagggtcacgccgtg
gggctggtgaagaacctcgccctcatggcctacatctccgtcggctcccagccgtcgccc
atcctggagttcttggaggagtggagcatggagaacctggaggagatctcgccggccgcc
atcgcagacgccacgaagatcttcgtgaacggctgctgggtgggaatccacaaggacccc
gagcagctgatgaacacgctgaggaagctgcgccggcagatggacatcatcgtatccgag
gtgtcgatgatcagagacatcagggaacgcgagatccggatctacaccgacgccgggcgg
atctgccgaccgctgctgatcgtggagaagcagaagctgctgctgaagcggcgccacatc
gaccagctgaaggagagggagtacaacaactacagctggcaggacctggtcgccagcggc
gtggtggagtacatcgacacgctggaggaggagacggtgatgctcgccatgacccccgac
gacctccaggagaagggcgtggcctactgctccacctacacccactgcgagatccacccg
tccatgatcctgggggtgtgcgcgtccatcatccccttccccgaccacaaccagtctccc
aggaacacgtaccagtccgctatggggaagcaggccatgggcgtctacatcaccaacttc
cacgtgcgaatggacacgctcgctcacgtgttgtactacccccagaaaccgctggtcacc
acccggtccatggagtacctgcgcttcagagaacttcctgcaggtatcaactccatcgtg
gcgatcgcttcgtataccggctacaaccaggaggactcagtgatcatgaaccggtcggca
gtggaccgcgggttcttcaggtccgttttctaccgatcctacaaggagcaggagtccaag
aaggggttcgaccaggaggaggtcttcgagaagccgacgcgcgaaacctgccagggtatg
agacacgccatctacgacaagctggacgacgacggtctgatcgcgccgggcgtccgcgtg
tcgggcgaggacgtgatcatcgggaagacggtgacgctgccggagaacgacgacgagctg
gacagcaccaaccggcgctacaccaagagggactgcagcaccttcctgaggaccagcgag
accggcatcgtggaccaagtgatggtcacgctcaaccaggagggctacaagttctgcaag
atcagggttcgctcggtccggatcccgcagatcggagacaagttcgccagccgacacgga
cagaagggaacctgtgggatccagtacagacaggaggacatgccgttcacctgtgagggc
atcacgcccgacatcatcatcaaccctcacgccatcccctccaggatgacggtcggccat
ctgatcgagtgtctgcaggggaaggtctccgccaacaaaggcgagatcggcgacgccacg
ccgttcaacgacgccgtcaacgtgcagaaagtgtccaacctgctgtcggagtacggatac
cacctgagaggcaacgaggtgctttacaacggtttcaccggcaggaagctgacgtcgcag
atcttcatcggcccgacgtactaccagcgcctgaagcacatggtggacgacaagatccac
tcgcgggcgcgcggccccgtccagatcctcaaccgccaaccgatggaggggcggtcccgc
gacggcgggctgcggttcggcgagatggagcgcgactgtcagatcgctcacggcgccgcc
cagttcctgcgcgagcgtctgttcgaggcgtccgacccgtaccaggtccacgtgtgcaac
ctgtgcggcctgatggccatcgccaacacgcgaacgcacacatacgagtgtcgcggctgc
cgcaacaagacacagatctctctggtccggatgccgtacgcatgcaagctgctcttccag
gaactcatgtccatgagcatcgccccccgcatgatgacgtcatag
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integrated database retrieval system
