Antennarius striatus (striated frogfish): 137603280
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Entry
137603280 CDS
T10427
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137603280 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137603280 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137603280 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
astr00535
]
137603280 (col9a1b)
Proteoglycans [BR:
astr00535
]
Extracellular matrix (ECM) proteoglycans
Others
137603280 (col9a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137603280
NCBI-ProteinID:
XP_068182625
LinkDB
All DBs
Position
11:complement(14789665..14804426)
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AA seq
680 aa
AA seq
DB search
MIRAPEVRGPLLVLLLQLVLICSAQRSGGPAGPLGPAGVPGINGIDGERGEDGEDGLPGP
DGDAGKPGSSGLPGIPGNDGLTGSIGDPGPDGPPGQKGEPGKPGPRGAAGVGTDGPPGSP
GPGGLPGEVGKVGAPGPMGVRGPPGPRGPTGPRGAAGLLGSADLCPNSCPPGTAGHPGLP
GMKGHKGVKGEAGEPGKQGHKGEEGDQGGPGEVGSQGPTGHQGIRGAMGMIGRKGDIGAR
GLDGDPGPQGVAGATGDQGQRGAMGEVGPKGEKGIQGRRGNTGLPGPKGEAGLPGVDGRE
GIPGMPGAKGSIGKAGAPGEVGTPGLPGLPGSPGQKGSSGLKGDAGQLGLPGTIGSAGKT
GERGEQGEVGPVGPIGEPGDIGEHGPVGPAGKPGARGPKGDPGLPGLPGPPGLPGVKGDR
GERGEAGPKGDQGGQGDEGNPGEKGDVGDPGEAGPKGESGVPGETGKRGPEGSRGQPGIE
GPPGTPGQRGMQGDRGPPGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPES
GAAGLPGKPGPPGPPGIPGDNGFRGQPGTRGLPGLKGPPGALGVKGPKGEMGDRGSRGPT
VRGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGLPGVPGQPGVPGPPGAAGPNGYCDPSAC
NLQAGAAHQSLDVKGPAGNK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgattcgggccccagaggttagagggcctcttctggttctgcttctccagcttgtcctt
atctgctctgctcaaaggagcggaggacctgctggccctcttggacctgcaggtgtccca
ggaattaatggcatcgatggggaaaggggagaagatggcgaggatggtcttcccggacct
gatggagatgcaggtaaacccgggtcttcaggcttacctggaattccaggaaatgatggt
ttgaccggctcgattggagatcctgggcctgatggtcctcccggacagaaaggtgaacct
ggaaaacctggaccacgtggagcagctggtgtagggacagatggacctccaggatcacct
ggacctggaggacttccaggtgaagtgggaaaagttggagcacctgggcccatgggtgtg
agaggtccaccgggaccacgtggaccaacagggcctagaggtgcagctggattgctgggc
agtgccgacctgtgcccaaactcttgtccacctgggactgctggtcatcccggtcttcct
ggtatgaagggccacaaaggagtcaaaggtgaagcaggagaacctgggaaacaagggcac
aagggtgaggagggagaccagggaggcccgggggaggtcggatcccaaggaccaacgggt
catcagggaattcgaggagccatgggaatgataggccgcaagggagatataggagctaga
ggtcttgatggagatccaggtcctcagggtgttgcaggggcaactggggaccaaggccag
agaggtgcgatgggggaggttggacctaaaggtgaaaagggtattcaagggcggagaggg
aacacaggccttccaggaccgaagggagaggctggcctaccaggtgtggacggtcgagaa
ggtattcctgggatgccaggagcaaagggaagcatcgggaaggcaggcgctcctggagag
gttggaactccggggcttcctggcttgcctggatcacctggacaaaaaggttcaagcggc
cttaagggggatgctggtcaattaggccttccaggaacaattggatctgctggcaaaaca
ggtgagcgtggagaacagggagaggtgggacctgtcggacctattggtgaacctggagat
ataggagagcatggccctgtaggtccagctggcaagccaggtgctaggggacccaaaggt
gaccctggccttcctggtctccctggtcctcctggtctgcctggggtgaaaggagacagg
ggagagcgtggagaggcgggaccaaaaggagatcagggaggacaaggtgatgaaggaaac
cctggagaaaaaggagatgttggtgatcctggagaagctggacctaaaggagagagtggt
gttcctggagagactggaaaacgcggtccagagggaagccgtggtcagcctggtatcgag
ggcccccctggaacacctgggcagcggggcatgcagggggacaggggtccacctggagtc
agagggtctcaaggtccggcggggaaagagccaagcgatcagcacatcaagcaagtttgc
atgcgagtcatgcaagaacagcttgctcagttagctgccagtttaagaagaccagagtct
ggtgcagcaggtttacctggaaaacctggacctccaggacctcctggaattccaggagac
aatggtttccgtgggcaacctggaacaagaggtctcccaggactcaaaggaccaccaggg
gctttaggagtcaaaggaccaaaaggtgaaatgggagacagaggctctagagggccgact
gtacgaggacctaaaggccagcccggacctcctggacttcctggtgagccaggcaaaccc
ggctacggtcaggatggcagggatgggcagaggggactgcctggtgttcctggacaaccc
ggtgtgcctgggcctcccggtgcagctggtcctaatggttactgcgatccttcagcttgc
aaccttcaggcgggagccgcccaccagtctctggatgtgaaaggacctgcagggaacaaa
tag
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