Antennarius striatus (striated frogfish): 137603427
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Entry
137603427 CDS
T10427
Symbol
msh6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137603427 (msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
astr03400
]
137603427 (msh6)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137603427 (msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
137603427
NCBI-ProteinID:
XP_068182984
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Position
11:complement(15784391..15790848)
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AA seq
1376 aa
AA seq
DB search
MAKQSSLFSFFTKSPPLVAKPKPSSSPAEADLPSSVKKSNSSPKEQAQHTPEKQPSKAKQ
KNNSKPAKGGFDKLFSPKTPSAKQSSSTCPFEAGALVWAKLEGHPWWPCMVVPHPLSRQQ
MRGKGRDQRIHVHFFDEPPTRGWVSTKYIREYQGSDTSDTATGGVFFSGKPVIRRAMQLA
DKVMFDSHEKRLKMPLCTDPSDEEDEEEEMEFDQSTVSDEEISGDEDDEQKKEKLKSPRV
KRRSTRVSKEMGSKAKRRRIIVASDSDGSDEEFKPEQAASSSEDEEEEGTVSSEESVQES
EPESPVKPIKRKRPAEKSTSEKAKIPTTPSTAQRGAPAAVSADTKSRLSAFSAPDSFESQ
ENNSGTGGGATIWDHEKLEWLQDGRRKDSRRKRQTEDEYDSSTLYVPEDFLNRTTPGMRR
WWQLKSKMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFGRFSDG
LVQKGYKVARVEQTETPDMMEARCKTMAKPTKYDRVVKREVCRIITRGTQTYSVLDGAPS
ESQSKFLLSVKEKAEEESSGRCRTYGVCFVDTSVGYFHVGQFPDDRHCSRLRTLIAHFSP
AEVLFEKGNPSIETRKILRASLSSALQEGLGAGTQFWDAQKTLKTLSEENYFTESSGKNQ
GTGSDFLPALLKKMTSESDSLCLTPKEGYELALSALGGCIFYLKKCLVDQELLSMANFEE
YIPVDVEMEKATGPTSFFAQTRQRMVLDGVTLANLEILQSGSGGTEGTLLERLDTCSTPF
GKRLMKQWLCAPLCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDLERLLSKIHSIG
TPLKGQDHPDSRAVLYEEVTYSKRKIADFLSALEGFKIMQEIISVLSPVSSEFQSSLLLQ
VINIKGEKDGLFPNLSAELTRWDTAFDHQKARTTGVITPKTGFDPEYDQALTGIKTCERE
LNDYLDRQKKRLGCKSMSYWGTGRNRFQMEVPDSVSERNIPEEYEVKSTKKGFKRYVTKE
SERLFSELQGFEEKRDAALKDCMRRLFYNFDKNYRDWKTGVECMAVLDVLLALSRYSQGG
DGPMTRPEVVLPEGDDRIKSFIDLTGSRHPCVTKTFFGDDFIPNDIYIGCPGSSEDNVGK
SDALCVLVTGPNMGGKSTLMRQCGLVIILAQLGCYVPAESLRFTPVDRVFTRLGASDRIM
AGESTFFVELSETASILHHATKHSLVLLDELGRGTATYDGTAIASAVVKELAEKICCRTL
FSTHYHSLVEDYANNHAVRLGHMACMVENECEDPSQETITFLYKFITGACPKSYGFNAAR
LACLPEEVIQTGHRKAREFEKSTVNRRLFKKLCSFAEDAALDKTHFIPLVEMLNKL
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaaagctctcttttcagttttttcaccaagtctccaccgctggtcgccaag
ccgaagccgagcagctctccggccgaggcagacctgccttcctccgtcaagaagtcgaac
tcctctccgaaggaacaagcacagcacacaccggaaaaacagccaagcaaagcgaagcag
aagaacaactccaaaccagcgaaagggggattcgacaaactatttagccccaaaaccccg
tctgcaaagcaaagcagctccacatgccctttcgaagctggtgctctggtgtgggcaaag
ttggagggacacccctggtggccgtgtatggtggtgccccaccccctgagtaggcaacag
atgaggggcaaagggagggatcagcgcatacatgttcatttctttgatgagccacctacc
agaggctgggtcagcaccaaatatatccgagagtaccaaggctctgacaccagtgacact
gcaacagggggggtattcttcagtggcaaacctgtaattcgtcgtgcgatgcagcttgct
gataaggttatgtttgatagccatgagaagagattgaagatgcctctgtgcacagatccc
tctgatgaggaagatgaggaggaagaaatggagtttgaccaatcaacagtgagtgatgaa
gagataagtggtgatgaagatgatgaacagaaaaaagagaaactgaagtcgcccagggtc
aaacgacgttcaactcgtgtgtcaaaagaaatgggaagtaaggccaaacgtcgtcgcata
attgtagcttcagacagcgatggatcggacgaagaattcaaaccagaacaagctgcatcc
agcagtgaggatgaggaggaagaagggacagtgagcagtgaagagagcgttcaagagtcc
gaaccagagagccctgttaagcccataaagcgcaaaagacctgctgagaagtctacttct
gaaaaagccaagatacccaccaccccgtccactgcacagaggggagctccagcagctgtt
tcagccgacactaagtctcgtttgtcggccttctcagctcctgacagttttgagagtcag
gaaaacaactcaggcacaggtggaggcgccacaatctgggaccatgaaaaactggaatgg
ttacaggatggcaggaggaaagacagcaggaggaagcgtcaaacggaggatgagtatgat
tcctccaccttgtatgtgccagaagactttcttaacaggactactcctggtatgcgtcgg
tggtggcagctcaaatcgaagatgtttgatacggtaattttctacaaggtgggaaagttt
tatgagctctaccacatggacgctgtgatcggagtcaacgagcttggattaacatttatg
aaggggacctgggcgcattcaggctttccggagattggctttggccgtttttcagatggt
ctggttcagaaaggctacaaggtggcgcgagtggagcagacagagaccccggacatgatg
gaagcacgttgtaagactatggcgaagcccacaaaatatgaccgtgtggtgaaaagagag
gtgtgcaggattatcacacgcggcacgcaaacctacagcgtgctggatggggctccctcc
gagagtcagagcaagttcctgctgagtgtaaaggaaaaggctgaggaggaaagttctggt
cgctgccgcacttatggagtctgttttgtggatacctccgtgggttatttccatgtaggt
cagttcccagatgatcgtcactgctcacgtctgcgcacgttgatagcacacttttcacct
gctgaagtgctttttgaaaaggggaacccatctattgaaacacgcaaaatactcagggct
tccctgtcctctgctctacaggaaggacttggcgctggcacccaattctgggatgcccaa
aagactctgaaaaccctgtcagaagaaaattactttacagagtcttctggcaaaaatcag
gggacagggagcgattttcttccagctctccttaaaaagatgacttctgagagtgattcc
ttgtgcctcactcctaaggaaggctatgagctggcgctgtcagcactgggtggatgcatt
ttctacttaaagaaatgtctggtagaccaagaactgctatctatggctaactttgaagaa
tatatcccagttgacgttgagatggagaaagctactggacccaccagtttctttgcccag
actcgtcagcggatggtcctcgatggcgtaactcttgcaaacttggaaatcttgcagagt
gggtcaggaggaacagaggggacgctgctcgagcgcttggacacctgctctaccccattt
ggaaagaggctgatgaagcaatggctctgtgctcctctttgcaaccccacatccatcaag
gaccgtctggatgcagtagaagacctaatgggagctcaggcccaagcaactgaagtttca
gatctgctgaagaagctaccagatttggagcgtcttttgagcaagatccatagtattggc
actccactaaagggccaggatcaccccgacagcagagcagttctctatgaagaggtcacc
tacagcaaacgcaagatagcagatttcctttcagcactggaaggtttcaaaatcatgcag
gagatcatttcagtcctctctccagtttccagtgaattccaatcatcattgctccttcaa
gtcatcaatataaagggtgaaaaagacggtctctttcccaacctctctgcagaactgact
cgctgggatacagccttcgaccaccagaaagcccgtaccactggtgtcatcactcctaaa
actggctttgatcctgagtacgaccaagctttgactggcatcaagacttgcgaacgagag
ctgaacgattacctagacagacagaagaaaagacttggctgtaaaagcatgtcctactgg
ggaacagggcgaaaccgtttccagatggaggttcctgacagtgtctcggagaggaatatt
cctgaggagtacgaagtgaagtccacaaagaaaggctttaagcgttacgtgacgaaggag
agcgaacggctgttttcagagctgcaagggtttgaggagaagagagacgctgctctaaaa
gactgcatgaggaggctcttctacaactttgataagaactacagagactggaagacgggt
gtggagtgcatggcagtgttggatgtgctgctggctttgtcgcgctacagtcagggcgga
gatggaccaatgaccaggccagaggtggtgctccccgagggtgatgaccggataaagtct
ttcattgacctcactgggtcccgccacccttgtgtcacgaaaaccttttttggtgacgac
ttcatccctaatgacatctacatcggctgcccgggcagtagcgaagacaacgtgggaaaa
agtgatgccttgtgtgtcctggtcacaggaccaaacatgggggggaagtcaactctcatg
agacagtgtggacttgtcatcatcctggcccagctgggttgctatgtccctgcagagagt
ctacgtttcacaccagttgacagggtcttcactcgactaggagcctcggatcgtattatg
gctggggagagtaccttcttcgtggagttgagtgagactgccagcatcctgcaccatgct
actaaacactccctcgtgctcctggatgaattaggaaggggcacagccacatatgatgga
acagctattgccagtgctgttgtgaaggagcttgctgaaaagatttgctgtcgcacgctc
ttctctacacactatcactcgctggtggaggactatgccaataaccatgctgtgcggttg
ggccacatggcttgtatggtggagaatgaatgcgaggacccaagccaagagaccatcaca
ttcctttacaagttcatcactggtgcttgtccgaaaagttacggcttcaacgctgctcga
ctcgcctgcttgccagaagaggtcatccaaacaggccacaggaaggccagagagtttgag
aagagcactgtcaatcgcagacttttcaagaagctctgctcgtttgctgaagatgctgca
ctggacaaaacacacttcattccccttgtcgagatgctcaataagttgtag
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