Antennarius striatus (striated frogfish): 137603628
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Entry
137603628 CDS
T10427
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137603628 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137603628 (pnpt1)
03016 Transfer RNA biogenesis [BR:
astr03016
]
137603628 (pnpt1)
Enzymes [BR:
astr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
137603628 (pnpt1)
Messenger RNA biogenesis [BR:
astr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
137603628 (pnpt1)
Transfer RNA biogenesis [BR:
astr03016
]
Prokaryotic type
tRNA degradation factors
137603628 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
RST
S1_2
Motif
Other DBs
NCBI-GeneID:
137603628
NCBI-ProteinID:
XP_068183367
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All DBs
Position
11:6654438..6669210
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AA seq
770 aa
AA seq
DB search
MRNLLRLGRSCSWLQVRLCHRSVYSRHAKSVRASVDLGEKKLQISSGKFAKFADGCAVVQ
MGETSVMVTAVSKTKPSSTQFMPLVVDYRQKAAAAGRIPTNYLRRELGPSDNEILTSRLI
DRSVRPLFPPGYFYDTQILCNLLAVDGVNNPDVLAINAASAALALSDIPWHGPIGAVRVG
LIDREVVVNPTRVEMLSSSLNMVVAGAPSSQVVMIEASAENSLQQDFCHAVKVGIKHTQQ
IIHAIQQMESEQKVTKRTPVKIFSAPANMVEHIRHSASKMIHAVFSDHTHDKISRDEAIN
KIRLEMEEKIKGEFPEAEPFEVVESFNVVFKDVFRNLALNEYMRCDGRDLSALRNISCEV
DLFEPLHGSALFQRGQTQVLSSVTFDSLESSIKADVINTALSGIKDKNFMLHYDFPPYAT
NETGRVGGTNRRELGHGALAEKALRPVIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSPVAGVAVGLVSKANPENPAEIQDYRLLTDILGIEDHLGDMDFKLAGTSKG
ITALQADVKIPGLPLKLVMEAIQQGTVARREILAIMNKCIAKPRASRKKNGPVVEHIKVP
ISRRAHFVGPGGYNLRRLQVQTGVTISQMDEERFSVFAPTPGAMNEAQEIIGEICMDDQE
DQLEFGAIYTATITEIRDAGVMVKLYPNMTAVLLHNSQLDHKRIKHPSALGLEVGQQIEV
KYFGRDPTDGRMRISRKVLQSPVATLVKTLSEKQSISVGVSSSSTNSTNL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatttgcttcgtctgggacgttcgtgctcctggcttcaagtccgtctctgtcac
cgcagtgtttacagtcgacatgctaaatccgtcagagcgtcagtggaccttggggaaaag
aaacttcagatctcctcagggaaatttgccaaatttgctgatgggtgcgctgtagtgcag
atgggagaaacctctgtgatggtgaccgctgtgagcaaaaccaaaccttcttcaactcag
ttcatgccccttgtggttgactacagacagaaagcagcagctgctggtcgaatccccacc
aactatttgagacgagagctgggccctagcgacaatgagatcctcacaagcagactcata
gacagatcagttagaccgctgttccctccaggatacttttatgatactcagattctttgt
aacctgctggcagttgatggtgtcaataatccagatgttctggctattaatgcagcttct
gctgctctggccctgtctgacatcccctggcatggacctataggtgctgtgcgtgtgggc
ctcatagatcgagaggtcgtggtcaaccccactagggtagagatgctttccagcagtctt
aacatggttgtggctggggcccctagtagtcaagtggtgatgattgaagcttcagccgag
aactcactacaacaggatttctgccatgcggtgaaggtgggaatcaaacacacccagcag
attatacatgcgatccagcagatggaaagtgagcagaaggtcaccaaacgcacccccgta
aagatcttctcagctcccgctaacatggtggaacatattagacactcagcctctaagatg
atccatgcagtctttagtgatcacactcatgataagatttctagagatgaggctattaac
aaaattcgactagaaatggaagagaaaataaaaggagagtttcctgaggctgaaccattt
gaagtcgttgagtccttcaacgttgtgttcaaagatgtctttcgtaatttggcgcttaat
gaatatatgagatgtgacgggagggatttgtctgccttaagaaacatctcatgtgaggtc
gacctctttgaaccgcttcacggttcagctctgttccagagaggacaaacacaggtgttg
agcagtgtcacgtttgattccctggaatccagtatcaaagcagatgtcatcaatacagcc
ttgagtggcattaaagacaagaactttatgcttcactatgatttccctccatatgcgaca
aatgagactgggagggtgggcggaaccaacagaagagagcttggacatggggccttagct
gagaaagctctgagaccagtcattcccaaagacttccccttcaccattagagtcactgct
gaggtccttgagtcaaacggatcctcctcaatggcttcagcgtgtggaggcagccttgct
ctaatggatgcaggtgtgcccatctcttctcctgtggcaggtgtagcggttggccttgtc
tccaaagccaatccagagaatcctgctgaaatccaagactacagattactgactgatatc
ctgggaatagaggatcacctgggagacatggactttaaattagcaggaacgagcaaaggc
atcactgctttgcaggctgatgtgaagatcccaggtttgcctctgaagttggtcatggag
gctattcagcaaggaacagtggcaaggagagaaatcttggccatcatgaataaatgtata
gcaaagcccagagctagtaggaagaagaacgggcctgttgttgaacacatcaaggtgcct
atttccaggcgggctcactttgtgggcccggggggctacaaccttcgcagactgcaagta
caaacaggcgttactataagtcagatggacgaggagagattctctgtgttcgctccaaca
ccaggagccatgaacgaagcccaagagatcatcggcgaaatctgcatggatgatcaagaa
gaccagctagaattcggcgccatctacactgcaaccatcactgagattagggacgctggt
gtgatggtaaaactttaccccaacatgaccgctgtgcttctgcataattcacaactggac
cacaaacggatcaaacatccaagtgctttgggtttagaagtgggacagcagatagaggtg
aagtactttggacgggacccaacagacggcagaatgagaatttcaaggaaagttctccaa
tctcctgttgcaacccttgtaaagacgctaagtgagaaacagagcatctctgtgggtgtc
agcagcagcagcacgaatagtaccaatttgtga
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