Antennarius striatus (striated frogfish): 137604243
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Entry
137604243 CDS
T10427
Symbol
col2a1a
Name
(RefSeq) collagen, type II, alpha 1a isoform X1
KO
K19719
collagen type II alpha
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
Brite
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137604243 (col2a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
137604243
NCBI-ProteinID:
XP_068184370
LinkDB
All DBs
Position
2:complement(2449286..2466318)
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AA seq
1487 aa
AA seq
DB search
MFSFVDSRTVLLLAASQLVLLSLVTCQDEDDQDAGGCIQDGQQYNDKDVWKPEPCRICVC
DSGSVLCDEIICEEIRECSNPVIPPGECCPICPADATAPIETIGAKGQKGEPGDITDVVG
PRGPAGPMGPPGEQGLRGEAGAKGDRGNIGPRGRDGEPGTPGNPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGGPGETGEPGAAGPMG
PRGPPGPAGKPGSDGEAGKPGKAGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG
ESGAAGAKGETGSAGENGASGPMGPRGLPGERGRPGAAGAAGARGNDGLPGPAGPPGPVG
PAGAPGFPGSPGSKGEAGPTGARGAEGAQGPRGEAGTPGSPGPAGASGNPGTDGIPGAKG
SAGAAGIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGLPGFKGEAGPKGELGPAGPLG
APGPAGEEGKRGARGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGIPGATG
AKGATGDPGRTGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKSGEKGLVGRPGLRGLSGKDGETGPSGPPGPAGPAGERGEQGQPG
PSGFQGLPGPTGAPGEAGKPGDQGVSGEGGAPGAVGPRGERGFPGERGGAGPQGLQGPRG
LPGTPGSDGPKGAIGPAGAAGSQGPPGLQGMPGERGAGGIPGPKGDRGDSGLKGPEGAPG
KDGSRGLTGPIGPPGPSGPNGAKGETGPTGPSGAPGARGAPGDRGEGGPPGPAGFAGPPG
ADGQPGAKGEGGESGQKGDSGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPG
AAGRVGPPGPNGNPGPVGPAGASGKDGPKGVRGDAGPPGRQGDAGLRGPAGAHGEKGEPG
EDGPPGADGPSGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGGTGSAGDRGPPG
PVGPPGLTGPAGETGREGTPGSDGPPGRDGSTGVKGERGNTGPAGAPGAPGAPGAPGPVG
PLGKQGDRGEGGAQGPGGPPGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQG
LPGPPGPSGDSGAPGSAGPGGPKGPPGPVGPAGKDGSNGQPGPIGPPGPRGRSGESGPAG
PPGNAGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADEASSSLRQHDVEVDSSLK
SLNNQIENLRSPDGSQKNPARTCRDLKLCHPEWKSGNYWVDPNLGSTADAIKVFCNMETG
ETCAYPSIAKVPQKNWWTSKGKDRKHVWFGETMNGGFHFSYSQEGPAANTASVQLTFLRL
LSTEATQNLTYHCKNSVAYMDQTTGNLKKALLLQGSNDVEIRAEGNSRFTYTVLEDGCKK
HTGRWGKTVFEYKTKKTSRLPIVDIAPMDIGGADQEFGVDIGAVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggactcgcggaccgttctgctgctcgcagcatcccaactcgttcta
ctctccctggtcacatgtcaggacgaagacgaccaggatgcgggaggctgcatccaggac
ggccagcagtataatgataaggatgtgtggaagcccgagccgtgtcgcatctgtgtgtgt
gacagcgggtcggttctgtgtgatgagataatctgcgaggagatcagagagtgttccaat
cccgtcatcccgcccggagagtgctgccccatctgccccgccgacgccactgcccccatc
gagacgattggcgctaagggccagaaaggagaaccaggagacattacagatgttgttggc
ccccggggaccagcaggcccgatgggccccccaggggagcaggggctgcgaggagaagct
ggtgccaagggcgacaggggaaatattggacctcggggacgagatggtgaacctggaacc
cctggaaaccccggcccccccggccctcctggcccaccggggcttggaggaaactttgct
gctcagatggctggaggtttcgatgagaaggctggaggcgctcagatgggtgtgatgcaa
ggaccgatgggaccaatgggacctcgtggcccccctggaccttctggagctcctgggcca
cagggtttccagggcggccctggagagactggagagccgggtgcagctggaccaatggga
ccccgtggaccacctggacctgctggaaaacctggaagtgatggggaggctggaaaacct
ggaaaagccggtgaacggggacctgcagggccgcagggagcacgtggattccctggaact
ccaggacttcctggaatcaaaggacacagaggtcatcctggactggatggagcgaaggga
gaatctggcgctgcaggagccaagggtgagactggttctgctggagagaatggagcttct
ggacccatgggtccacgaggtcttcctggagagaggggacgtcctggagctgctggcgcc
gcaggggcccgtggaaacgatggcttgcctggtcctgctggtccacccggacccgttgga
cctgctggagctccaggttttccaggatctccaggatccaagggagaagctggtcctact
ggagcccgtggagctgaaggagcacaaggaccccgtggagaggccggtactccaggatcc
cccggtcctgcaggagcatcgggtaaccctggaactgatggcatccctggagccaaaggc
tctgctggtgctgctggaattgctggtgctcctggattccccggcccccgaggtccacct
ggacctcagggagccacaggacctcttgggccaaagggacagtctggagaccctggtctt
cctggattcaaaggggaggctggacccaagggagagctgggccccgctggtcctttaggt
gcacctggacctgctggtgaagaaggaaagagaggcgccagaggagaacctggatctgct
ggaccactgggacctccaggagagagaggagctcctggtaaccgtgggttccctggtcag
gatggtcttgctggagctaagggggccccaggtgaccgaggtattcctggtgctactggg
gctaaaggtgctactggagatcctggacggacaggagagtctggcctccctggagccaga
ggtctcactggtcgtcctggagatgctggtcctcaaggcaaagttgggccctcaggggcc
cctggtgaggacggccgccccggcccccctggtcctcagggagcccgtggacagccagga
gtgatgggattccctggacccaaaggcgctaacggtgaacctgggaagtcaggagagaag
ggtctagttggtcggcctggtctgaggggtctgtctggtaaagatggagagaccggtcct
tctggccctcctggacccgctggacccgctggagagagaggagagcaaggacagcctgga
ccttctggcttccagggtctgcctggacccactggggcccccggagaggctggaaagcct
ggagaccagggcgtttctggagagggtggagctcctggcgccgtcggaccccgaggtgaa
cgtggattccctggtgagcggggcggcgctggacctcagggtcttcaggggcctcgtgga
cttcctggaacaccaggaagtgatggacccaagggagccattggaccggctggtgctgct
ggatcccaggggccccctggcctgcagggtatgcccggagagagaggagccggtggcatc
ccggggcccaaaggagacagaggggacagcgggctgaaaggacccgagggcgctccagga
aaggacggctccagaggtttgaccggtcccattggtcctcctggtccatctggacccaac
ggcgccaagggtgagactggacccacgggcccgagcggggctcctggtgctcgcggcgct
cctggcgatcgtggggaggggggtcctcctggtcctgctggcttcgctggacctcctggt
gctgatggtcaacctggtgccaaaggtgagggcggtgagagtggacagaagggagacagc
ggcgctcctggacctcaggggccatccggggctcctggacctgtgggacccactggtgtt
tctggacctaaaggagcccgtggtgctcagggggctcctggggcaactggtttccctggt
gctgctgggagagtcggaccccccggccctaatggcaaccctggccccgttggtcctgct
ggtgcctctggtaaagacggaccaaagggagttcgcggtgatgccggccccccaggaaga
caaggagacgctggccttcgtggacctgctggagctcatggagagaagggagagcctgga
gaagacggacctcctggggctgacggaccttcaggtcctcagggtctggctggatctcgt
ggtattgttggtttgcctggtcagcgtggagagagaggattccccggcctccccggaccg
tctggagaacctggtaaacaaggaggtactggttctgctggtgaccgcggaccccctgga
cctgttggaccccctggacttactggacctgctggagagactggacgagagggtacccct
ggatcagatggacccccaggcagagacggatccactggtgtcaagggagagcgaggtaac
accggtcccgctggtgcccctggagctcctggtgcccctggtgccccaggacctgtggga
cccctcggaaagcagggagacagaggagagggaggtgctcaaggacccggaggaccccct
ggacctgctggcgccagaggaatggctggaccccaaggtccacgaggagacaagggcgag
gctggcgagactggagagagaggacagaagggccaccgtggattcactggtctgcagggt
cttccaggacctcccggtccctctggagattccggtgctcctggatctgctggaccaggc
ggacctaagggaccaccaggacctgtcggacctgctggcaaagacggatcaaatgggcag
cctggccccattggaccccctggacctcgtggacgttctggagaatctggtcctgctggt
cctcctggtaacgctgggccccctggccctcctggtccccctggtcccggtattgacatg
tctgccttcgccggtctgggtcagactgagaagtctccggacccactgaggtacatgagg
gccgatgaggcctccagctctctgaggcagcacgacgtggaggtcgactcctccctcaaa
tcgctcaacaaccagattgagaacctgcgaagccccgacggttcccaaaagaaccctgcc
cgcacctgcagggacctgaagctgtgccaccccgagtggaagagcggtaactactgggtt
gaccccaacctcggcagcacggctgatgccatcaaggtcttctgcaacatggagactgga
gagacctgcgcctacccaagcatcgccaaggtgccacagaagaactggtggaccagtaag
ggcaaggaccgcaaacacgtctggttcggagagaccatgaatggaggattccatttcagc
tactctcaggagggccccgctgccaacaccgccagcgtccagctgaccttcttgaggctc
ctgtccactgaggcgactcagaacctgacctaccattgcaagaacagcgttgcctacatg
gaccagaccacaggcaacctgaagaaggctttgctgctgcagggctccaacgacgtagag
atccgagcagagggcaacagtcgcttcacgtacaccgtgttggaggatggctgcaagaaa
cacacaggccggtggggcaagactgtctttgagtacaaaacgaagaaaacctcccgtctg
ccaatcgtggacattgctcctatggacatcggaggagcggatcaagagtttggagtggat
ataggcgccgtctgcttcttgtaa
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integrated database retrieval system
