Antennarius striatus (striated frogfish): 137604597
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Entry
137604597 CDS
T10427
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04382
Cornified envelope formation
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04518
Integrin signaling
astr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137604597 (col4a2)
04518 Integrin signaling
137604597 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137604597 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137604597 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137604597 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
astr04147
]
137604597 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
astr00536
]
137604597 (col4a2)
Exosome [BR:
astr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137604597 (col4a2)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137604597 (col4a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137604597
NCBI-ProteinID:
XP_068184543
LinkDB
All DBs
Position
12
Genome browser
AA seq
1678 aa
AA seq
DB search
MSGTMRGQHNRGLRSVRLLLLCVSAAILVSAVDAGGKKHSGPCGGRDCSEGCKCSPEKGA
RGQPGPLGPQGPQGPPGRPGDPGIQGPRGQRGDHGRGGIIGPKGSVGMTGVPGFSGNDGI
PGHPGQAGPRGKPGADGCNGTQGESGLPGQPGYGGTPGFPGQPGRKGAKGDSLELSVFME
RFRGDPGTHGINGIFGPQGDPGWQGNRGLPGPKGPPGPPGPRGPKGTMTKVLKGVRGDRG
DIGPPGPQGNSTHQQILPPYGPPGPRGEKGVKGERGDLIHIDNKGETGVVGFPGPRGTFG
ADGGPGLRGDLGEAGPKGRDGPKGVRGEAGELITSGLWPWSSVAGPMGPTGEQGPQGERG
PVGDQGFPGPPGWPASDSQQLVFDFMGPFGKKGERGDNGQQGEKGYPAVTAGPPGANGRP
GARGPPGPKGTWGDFFKGSPGGRGRPGNAGFKGVKGDHGECECSIVHSRPGPPGPAGDRG
DAGMTGEFGREGDVGDPGPQGEDGVPGFPGPSGLSGPKGQKGREGVATQKGHAGDTGTPG
RDGEPGAQGAPGFTGLNGFPGAQGLPGEAKPGPHGDKGFPGLPGQPGAAGFRGEPGEDLR
GLKGQPGIPGDDGLAGYQGVPGTPGSPGGCSPTGDGGQVDLTGPCGSFPGPPGPPGLPGP
TGLPGFPGIPGLNGVQGLHGPNGEKGEIGEQGIGGQPGPPGFPGPRGQFGVPGIKGSVGV
PGLPGVSGWTGAQGEKGAHGEILGATSGSPGDPGLPGLQGDKGQTGDEGEPGYPGMDGMP
GMIGIKGQSGPSGFQGEEGRPGPEGKYGYPGDPGSVGHPGPHGDIGQPGFTGERGAEGDP
GPPGPMGLKGTPGAFGQDGAIGEYGSTGDPGQTGADGQPGPSGMKGYKGSPGMSGFEGIR
GDKGVQGFSGQSGEPGGPGQSGPTGITGHKGEKGDRGLRGPPGRKPDIPANIAKDMKGPK
GDLGFPGHHGFPGPRGSKGLPGVPGFEGYHGLPGDPSTEKGFPGDPGAQGLPGIKGMPGQ
TGNRGISGFDGMSGNKGIKGSPGAYGATGDKGKSGAKGEKGSRIDIPGPTGFRGEHGTPG
EPGLKGLIGQTGDRGTSGFNGIEGRRGDSGAPGISGNPGAEGQPGTPGIQGQKGFPGTPG
KDGHAGFPGFPGNRGFPGLKGLYGLHGLKGQKGIPGIPGGDTTGPAGDPGTKGERGEDGV
PNNQPGFPGSPGLKGFQGPQGDQGQPGPPGFRGPSGPNVTSDRPGPGGDSGFQGPRGYQG
FPGPRGFSGANGSPGEKGIPGVNGFPGVPGWKGLKGDQGPVGYRGPNGISGKKGVKGEQG
LMGVPGLIGLKGERGPFGPKGNTGPPGARGIPGNQGSPPLPIRIPGERGLPGPQGIQGPG
GGKGELGPHGPPGDAGFIGPIGLKGMPGISGTPGVPGFRGEFGQVGHPGLQGMEGHRGKS
GVPGLPGMPGRSVSVGYLLVKHSQSEQKPMCPVGMSKLWDGYSMLYLEGQEKAHNQDLGL
AGSCLPKFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVEEEDIKPYISRCSVC
EAPSVAIAIHSQDITIPQCPAGWRSLWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTS
PFIECNGAKGTCHYFANKHSFWLTTIQQAFNSEPASETVKAGQILTRISRCQVCMKNL
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaccatgcgaggacaacacaacagaggattgaggagtgtgaggctgctgctc
ctgtgcgtctccgccgccatcctggtgtccgctgtagacgcgggtggtaagaagcacagc
ggcccctgtggaggcagagactgcagcgaaggatgtaaatgttcaccagagaaaggtgcc
aggggtcaacctgggcctcttggtcctcagggcccccaggggcctccagggagaccagga
gatccaggcatacaaggaccaagggggcaaagaggtgaccatggccgtggtggcattatt
ggtccaaaaggaagtgtgggaatgaccggcgttcctggattttctggaaatgatggaatt
cctggacacccaggacaagccggtccccgggggaagccaggtgctgacggctgtaatgga
actcaaggagaatcaggcttaccgggacaacctggctatgggggcacccctggttttcct
ggacaaccaggcaggaaaggagccaagggagactctctggagctgagtgtgttcatggag
cgcttcaggggagatccaggcacgcatgggatcaacggaatattcgggcctcaaggggac
ccaggatggcagggtaatagaggcctcccagggccaaagggccccccagggccaccaggc
ccccgtgggccaaagggcaccatgaccaaagtgctgaagggggtcagaggagaccggggt
gacatcggaccaccagggcctcaaggaaactccactcatcagcaaattctgcccccctac
gggccgccgggaccccgtggggagaaaggtgtaaaaggagaaagaggagatttgattcat
attgacaacaagggagaaacgggtgtagtgggatttcctggaccgcggggaacgtttgga
gcagatggaggtcctggactaaggggggatctcggtgaagcaggacccaaaggcagagat
ggtcctaagggagtcagaggtgaagcaggagagctgattacatcaggattatggccctgg
tcttcagtggccggtccgatgggtcctactggtgaacagggccctcaaggcgagaggggc
ccagttggagaccaaggattccctggaccaccaggatggccggcctctgactcccagcag
ctagtgtttgatttcatgggaccgtttggtaagaagggggagagaggagacaatggccag
caaggggagaaaggataccctgccgtcactgcaggaccccctggtgcaaatgggcgccca
ggagccaggggccccccaggacctaaaggcacatggggtgacttcttcaagggctctcct
ggagggagaggaaggcctggcaatgctggctttaagggagtgaaaggtgatcatggggaa
tgtgaatgcagtattgtacattctcgacctgggccgcctggcccggctggtgatcgcggt
gatgctgggatgactggagagtttgggagagagggagatgttggagatcctgggccccaa
ggagaggatggagtccctggatttcctggaccctctggtctgtcaggaccaaaaggtcaa
aaaggacgtgagggtgtggccacacagaaaggacatgctggagacacggggactcctggg
cgagatggtgagccaggagcacagggtgctccgggctttactggtttgaatggtttcccc
ggggcacaaggtcttccaggagaagctaaacccggaccacatggagacaaaggtttccca
ggtcttcctggccaacctggtgcagctgggtttaggggagaacctggtgaagaccttagg
ggcctcaaaggtcagcctggaatccctggtgacgatggccttgcaggctatcaaggagtt
ccaggcacacctgggagcccaggcggctgtagtccaacaggagatggaggacaggtggat
ttaacaggtccttgtggttcttttccgggacctcctggacctccaggacttccaggtcct
actggattgccaggttttccaggtattcccggccttaatggagttcaggggttacatgga
cccaatggggagaaaggagaaataggagaacaaggcataggtggtcaacctggaccgcct
gggtttcctggtccccgtggacagtttggggttcctggcatcaaaggttcagttggagtt
cccggattacccggtgtgtccggctggactggggcacaaggtgagaagggtgctcacgga
gagatcttgggagcaacttcaggatctcctggtgacccagggttgcctgggcttcagggg
gataaaggtcagactggcgatgaaggagaaccaggctatccaggaatggatggtatgcct
ggtatgatcggcatcaaaggtcaaagtggcccttcaggttttcagggggaagaaggacgg
cctggaccagagggcaaatatggctaccctggtgaccctgggtctgtaggtcaccctggt
ccccacggtgacattggacagccaggtttcactggagaaagaggagctgaaggagaccca
ggccccccaggtccaatgggattaaaaggcaccccaggggcatttggtcaggatggtgcc
attggagagtatggctcaacgggtgacccaggacagactggtgctgatgggcaaccagga
ccttcaggaatgaagggttacaaaggctctcctgggatgtcaggttttgaggggatcagg
ggtgacaaaggggtgcagggcttcagcggtcagagtggagaacctggagggccaggccaa
tctgggcctacaggaataacaggtcacaaaggagagaaaggtgatcgtggcttgagaggt
cctcctgggagaaagcctgacattcctgctaacatagctaaggacatgaagggaccaaaa
ggagaccttggatttccaggacatcatggattccctggaccgagaggttcgaagggatta
cctggtgtaccaggctttgagggatatcatggtcttcctggagaccccagcactgagaag
ggtttcccaggagatccaggtgcacagggcttgccagggataaaaggaatgccaggccaa
acaggaaatcgtggaatttctggttttgatggaatgtctgggaataagggaatcaaagga
agccctggtgcttatggcgcaacaggagataaaggaaagagcggtgccaaaggtgaaaaa
ggttctcgcatagacattccaggacctaccggttttagaggagagcatggtactccagga
gaaccaggtctgaaaggattaattggacaaactggagacagaggtacatctggttttaat
ggtatcgaagggagaaggggtgactcgggtgctccaggaatatcaggaaatccaggcgca
gaagggcagccggggactcctggcatccaaggtcagaaaggctttccaggaactcctgga
aaagatggacatgctggatttcctggtttccctggaaatagagggttccctggattaaag
ggcctgtatgggttgcatggactgaagggacagaagggtatccccggaataccaggtggg
gacaccactggaccagctggagaccctggaaccaaaggagagcggggagaagatggtgtc
ccaaacaaccagccaggttttcctggttcaccgggtttgaaaggcttccagggacctcaa
ggtgatcaaggtcaacctggaccaccgggattccgtggcccttcagggccaaatgtgacc
tcagacagaccaggacccgggggggacagtggttttcaaggacctagaggataccaaggt
ttccctggacccagaggattttctggtgcaaatggttcccctggagaaaaaggtataccg
ggtgtaaatggatttcctggagtccctggttggaagggactcaaaggagatcaagggcca
gttggatacagagggccgaatggcatttctgggaagaaaggagtgaaaggagaacaagga
ttaatgggagttcctggtctgattggtctgaaaggagaaagagggccatttggccccaaa
ggaaacactggacctccaggtgcccgggggattccaggcaaccagggttctcctcctctt
cctatcagaattccaggtgaaagaggccttccaggaccacagggtatccaaggaccaggg
gggggcaagggggaactagggccacacggccccccaggagacgcaggttttattggaccc
attggtctgaagggtatgcctgggattagtgggacaccaggggtgcctggattccgtgga
gaatttggacaagtgggtcacccaggtctgcagggcatggaaggtcatcgtgggaaatct
ggcgtccccgggttgcctggcatgcctggacgcagtgtcagcgtgggttacttgctggtg
aaacacagccaatcggaacaaaaacccatgtgtcctgtgggtatgtctaagctgtgggac
ggctacagtatgctgtacctggagggccaagaaaaggcccacaaccaggatctgggtcta
gccggctcctgcctgcccaaattcagcaccatgcccttcctgtactgcaatccaggggac
atttgttactacgccagcagaaatgataagtcttattggctgtctacgactgctcctctt
cccatgatgcccgttgaagaggaagacatcaaaccgtacatcagccgctgctcagtttgc
gaagctccatccgttgctattgcaattcacagccaggacatcaccatcccacagtgtccg
gcgggctggcgcagcctgtggatcggctactccttcctcatgcatacagccgcaggaaat
gaaggtggaggtcagtccttgtcatcgcctggttcctgcctggaagacttccgtacgtcg
ccattcattgagtgtaacggtgctaaaggcacatgccactactttgctaacaaacacagc
ttctggttgaccaccatacagcaggcgttcaactcagaaccggcatcagagacggtcaaa
gcaggacagatcctgacgcgtatcagtcgctgtcaggtctgcatgaagaacttgtga
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integrated database retrieval system
