Antennarius striatus (striated frogfish): 137604680
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Entry
137604680 CDS
T10427
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137604680 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137604680 (sf3b1)
03036 Chromosome and associated proteins [BR:
astr03036
]
137604680 (sf3b1)
Spliceosome [BR:
astr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137604680 (sf3b1)
Complex B
137604680 (sf3b1)
Complex C
U2 SnRNP specific factors
137604680 (sf3b1)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
137604680 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
137604680
NCBI-ProteinID:
XP_068184728
LinkDB
All DBs
Position
12:complement(2253289..2263324)
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AA seq
1314 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKATLLEEGDQGVGLDSTGFYDQEIYGGSDSRFAGYVTSI
AANEQEEDDEEDSSTSLLGQKKPGYHAPVAILNAIPQSDEQYDPFAEHRPQKIAEREDEY
KARRRQMIISPERLDPFADGGKTPDPKMQVRSYVDVMLEQNLSKEEREIRLQLAEKAKSG
DLKAVNGSAANQAAAKRKRRWDQTADQTPSNATPKKMSSWDQADSSAETPGHTPAHTPSN
SRWDETPGRPKGSETPGATPSTRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATGSVRK
NRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSST
PLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPE
GYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFRMQAEDQTTKQMNDQPSGNLPFLKPD
DIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGP
LFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYAR
VEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKA
VCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIA
ALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVM
LILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNY
RQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEE
QLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQ
AADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMT
PPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHK
KAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLP
ALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASA
VVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYC
LQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDDKNVYVRYELDYVV
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacgcacgaagatatcgaggcccagatcctggagatccagggg
atgaaggctaccctgctggaggaaggagaccagggagtaggccttgattccactggcttt
tatgaccaggagatctatggaggcagcgacagccgctttgctggttatgtcacctctatt
gctgccaatgaacaagaggaagatgatgaagaggattcatcgacgagcttgttgggacaa
aagaagccagggtatcatgcaccagtggcaatacttaatgctattccacagtcagatgaa
caatatgacccgtttgcagagcatcgtccacaaaagattgcggagcgagaagatgaatac
aaagcccggcgcagacagatgatcatctcacccgagcgtcttgatccttttgcagatggg
ggcaaaacgccggaccccaagatgcaagtcaggtcatatgtggacgtcatgttggagcag
aacctgtccaaagaggagagagagattcgtctgcagctggcagagaaggccaagtcaggg
gacctgaaagctgtcaacgggtctgctgccaaccaagccgccgcaaaacgtaagcgtcgc
tgggaccagacggccgatcaaactccgtctaacgccacgcccaaaaagatgtccagctgg
gaccaggctgactcctctgctgagactccaggacacacaccggcacacacaccttcaaac
agtcgatgggacgaaactcccggccgccctaaaggcagcgagaccccgggggccactccc
agcacccgcatgtgggacccaactcctagtcacacaccggctggcgcagccacccccggc
agggacacgcctggccacgccacccccggccacggcggagccacgggaagcgtccgcaag
aaccgctgggatgaaactccaaagacggaaagggaaaccccgggacacggcagcggctgg
gccgaaacgccacgcacggacagaggggacgagtcggtgggagagactcccaccccaggg
gccagcaagaggaagtcccggtgggacgaaacccccgccagtcagatgggatcctccaca
ccgctgctcaccccgggaaaaacccccataggaacgccagccatgaacatggcgactcca
acaccaggtcacctgatgagcatgaccccagagcagctgcaggcgtggaggtgggagagg
gagatcgatgagaggaaccggcctctgactgacgaggagctggacgccatgttcccagag
ggatacaaggtcttgcctccaccagcaggctacgtcccgattcgaactccagcccgcaag
ttgtcggccacacccactcccatcggaggaatgacgggtttccgcatgcaggcggaagac
cagaccaccaaacagatgaacgaccagccgtcaggaaacctccccttcctcaaacccgac
gacatccagtattttgacaaattgctggttgaggtggacgagtccacattgagtccagaa
gagcagaaagagagaaagatcatgaagctgctgctcaagatcaaaaacggaacaccaccc
atgaggaaggccgccctgcgtcagatcacagataaggcccgtgagttcggagccggcccc
ctgttcaaccagatcctgccgttactcatgtctcccaccttggaggaccaggagcgccac
ctgctggtgaaagtcatcgaccgtattctttacaagctggacgacctggtccgaccgtac
gtacacaagatcctggtggtgatcgagccgctgctgatcgatgaggattactacgccaga
gtggaaggcagagagatcatctccaacttggcgaaggcggccggtctggccaccatgatc
tccaccatgcgacccgatatcgacaacatggacgagtacgtcagaaacacgacggcccga
gccttcgccgtggtggcgtccgccctcggcatcccctcgctgttgcctttcctgaaggcc
gtgtgtaagagcaagaagtcctggcaggcccgacacaccggcatcaagatcgtgcagcag
atcgccatcctcatgggctgcgccattctgccccacctccgcagcttggtggagatcatc
gaacacggtctagtggatgagcagcagaaggtcaggaccatcagtgctttggctatcgct
gccctggctgaagctgctaccccctacggtatcgagtccttcgactcggtcctcaagccg
ctgtggaagggcatcaggcagcacagaggaaagggtctggctgctttcctgaaggctatc
ggttacttgatccctctgatggacgctgagtatgcaaactactacaccagagaagtgatg
ctgatcctgatcagagagttccagtcccccgacgaggagatgaaaaagatcgtgttaaag
gtggtgaagcagtgttgcggcaccgacggtgtggaagccaattacatcaaaaccgagatc
ctgccccccttcttcaagcatttctggcaacaccggatggctctggacaggcgcaactac
agacagctggtggacaccacggtggagttggccaacaaagtgggagccgcggagatcatc
tctcgcatcgtcgacgacttgaaagacgaggcagaacagtacagaaaaatggtgatggag
accatcgagaagatcatgggtaacctgggcgccgccgacatcgaccacaagctggaggag
cagctgatcgacggcatcctgtacgccttccaggagcagacgaccgaggattctgtgatg
ctgaacggttttggtacggtggtgaacgccctggggaaacgcgtgaagccgtacctgcct
cagatctgcggtacggtgctgtggcgtctcaacaacaaatcggccaaagtccgtcagcag
gcggccgacctgatctcccgcacggccgtcgtcatgaagacctgccaggaggagaagctg
atgggtcacttgggcgtcgtcctgtacgagtacttgggggaggagtatcccgaggtgctg
gggagcatcctgggggccctgaaggccatcgtcaacgttatcgggatgcacaaaatgact
ccgcccatcaaagacctgcttcctcgtctcacccccatcctgaagaacagacacgagaag
gtgcaggagaactgcatcgacctggtgggcaggatcgcagacaggggggctgaatacgtg
tcggccagggagtggatgaggatctgcttcgaactgctggagctgctcaaggctcacaag
aaagccatccgcagagccaccgtcaacacgttcggttacatcgccaaagccatcggccct
cacgacgttttggccactctgctcaacaacctgaaggtccaggagcgtcagaaccgcgtc
tgcaccacggtggccatcgccatcgtggccgagacctgctcgccgttcaccgtgctgccg
gcgctcatgaacgagtaccgagtccccgagctcaacgtgcagaacggcgtgctcaagtcg
ctctccttcctgttcgagtacatcggggagatgggcaaagactacatctacgccgtcacg
ccgctgctggaggacgcgctcatggacagagacctggtccacaggcagaccgccagcgcc
gtcgtccagcacatgtccctgggcgtctacggcttcggctgcgaggactccctcaaccac
ctgctgaactacgtgtggcccaacgtgttcgagacgtcgcctcacgtcatccaggccgtc
atgggggccctggagggcctgagggtcgccatcgggccgtgtcgcatgctgcagtactgc
ctgcaggggctgttccacccggccaggaaggtgcgagacgtctactggaagatctacaac
tccatctacatcggctcccaggacgccctgatcgcccactacccgcaggtctacaacgac
gacaagaacgtttacgtccgctacgagctggattacgtcgtgtaa
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