Antennarius striatus (striated frogfish): 137604988
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Entry
137604988 CDS
T10427
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
KO
K06823
collagen type XVIII alpha
Organism
astr Antennarius striatus (striated frogfish)
Brite
Exosome [BR:
astr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137604988 (col18a1a)
Proteoglycans [BR:
astr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
137604988 (col18a1a)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137604988 (col18a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137604988
NCBI-ProteinID:
XP_068185382
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All DBs
Position
12:826879..888565
Genome browser
AA seq
1548 aa
AA seq
DB search
MDVLFNQVLETRQALSSSQESSTAQTPTSNQDMLITHVEAASKKPDTASVPVIAQSQVPS
QVSAVSEKVFSTTQKSIRKKETSQSTSISQTVIGKSTPGSHTEEPKSSQCLFIDPPLPFC
TSMVGKLFLVPNFLNHSTVEEVQVLLNEWAWLLRSHCHHSVEWFFCLLLVPKCGSLVPLS
VLPCRSFCEVLRDSCWSLLDEGRLPVECHTLPDEEDDGYQCLSVSNQKEDSGVSLLQLIG
DPPPNEITQVFGPDNTPGYVFGLDANTGQLARAHLPSPFYRDFSLIFHLKPTSTRGGVIF
SITDATQQIMYVGVKLSAVTGGNQNIILVYTEPDSEESYEAASFLVPSLMDTWTRFAISV
RDDKVMLYLNCDIDPQVMPIERSPDEMELEAGAGVFVGQAGGADPDKFLGVISELRVVGD
PRAAQWHCEEDGDDSDMASGEGSGYEGNAPPKPEVEIHTWTTAPPSSRPIQQPPLTGTEE
VTVGREMRPVGAKGDKGERGDKGAKGDRGPIGPKGDSGSSSSSRVGVRGEKGEPGEKGAK
GSAGFGYQGTKGDTGLPGPPGPPGPPGTAAESGTCEDGSNASCPPGPRGPAGPQGAPGPQ
GPPGADGEPGDPGENGSKGPEGPPGFPGTPGDSGPKGEKGDSGEGPPGPRGPPGPPGPPG
PGIKSTFVDMEGSGLPDLESIRGPPGLPGPPGPPGPPGTSTVGTGPGAFGPPGRDGAPGQ
TGLPGPPGAEGQQGFSGPKGEKGNSGDLGLPGAVGQKGAPGVPGLPGPGGEPGLAGLPGP
IGPAGPAGPPGLPGPPGPSYRVGFDDMEGSGGGSPHSVPGIRGPEGRQGPSGLPGLPGKP
GFPGLPGQKGSEGTRGRDGQPGLDGFPGPQGSKGERGDIGERGEQGRDGTGLPGPPGPPG
QPGQIIYRTLGNLEGVVGSIGSEGETGLPGQAGFPGPAGPKGDKGDIGPSGYGAKGEKGE
PGLVIGPDGNLLSLEGLTGVRGDRGPPGPVGPPGQYGPPGFKGEIGMPGRPGRPGINGYK
GEKGEPGGGSGYGYPGVPGPPGPPGPPGPPFSLGRFDHYETSRNYPAIKGEKGETGDPGL
PGIPGSSSNFDIYTLKNEMKGQRGETGLKGEKGEPSGGYYDPHFVGTNGPPGLPGPPGLQ
GPKGDSISGPPGPQGPPGTPGIGYDGRQGPPGPPGPPGLPAISNPGGGTFSVSVPGPPGP
PGPPGNPGLSSGVTVLRSYETMIATARRQAEGSLIYIIDNGDLYLRVRTGLRQVMLGDYT
PFFRDLENEVPEVQSPPVVLYPQSPDRSYTNGAGHYSESGSVIRPIEPLPHPPVEPPRYP
PKYEPRFPDSRNTGHTDGRLSTHQTGGRYPVTPQWQLNPPVPEPASHAETSGPGLHLIAL
NAPQTGNMRGIRGADFLCFQQARAVGLKGTFRAFLSSKLQDLYTIVRRSDRDSFPIVNLK
HQELFSSWESIFGDNASTIKEDVPIYSFDGRDILRDSAWPDKMVWHGSSNLGHRQTDHYC
ETWRAGDRAVTGLASSLRSGSLLQQTSSSCSSSYIVFCIENAFTSHSK
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttattcaaccaagtgttagaaactagacaagctttatcttccagccaggaa
tcctctacagctcaaacaccaaccagtaaccaggatatgttaattactcatgtagaagca
gctagtaagaaaccagacacagcatcagttcctgtaatagctcagtctcaagtgccaagt
caagtttcagcagttagcgagaaggtgttcagtactactcaaaaatccataagaaagaaa
gaaaccagccaatccacatcaataagccagacagtcataggtaagtcaacacctggaagc
cacacagaagaacctaaatcctcacaatgcttgttcatagatcctcctcttcctttctgt
acctctatggttgggaaattgtttcttgtgcccaatttcctcaaccacagcactgtggag
gaagtccaggtactccttaatgaatgggcgtggctgttgaggtcacattgtcaccatagt
gtggaatggtttttctgcctcctcttggtaccaaagtgtggttctctggtcccactgtcg
gtgttgccttgtcggagtttctgcgaagtcctgcgggacagttgctggtctcttctggat
gagggacgcctccctgtggagtgccacactctaccagatgaggaggatgatgggtatcag
tgcttgtcagttagtaaccagaaagaagacagtggagtctccttgttacagctgattggg
gatccccctcctaatgagatcacccaggtcttcgggcctgacaacaccccaggatatgtc
ttcggcctggacgccaacactggacagctggcccgcgcccaccttccaagcccattttac
agagacttctccctcatctttcacctgaagcccacctctaccaggggtggtgtcatcttc
tccatcaccgacgccacgcagcagatcatgtatgttggtgttaaactgtcggccgtgacg
ggtggcaaccagaatatcatcctggtctacactgagcctgactcagaggagtcgtacgag
gcagctagcttcctcgtgccctctctgatggatacctggactcgttttgccatctctgtg
agggacgacaaggtgatgctttacctcaactgtgacatcgaccctcaggtgatgcccatc
gagagatccccggatgagatggagctggaggccggtgcgggggtctttgtcgggcaagct
ggaggagccgatcctgacaagtttctgggagtgattagtgagttgagggtggtgggggac
ccccgtgctgcccagtggcactgtgaagaggatggagatgactcagacatggcttcaggt
gaaggtagtggctacgaaggaaatgcacccccaaaaccggaagtggagatacatacatgg
acgaccgctcctccatcttctcggcccattcagcagccaccactgaccgggacggaggag
gtgacagtaggaagagaaatgaggcctgttggggctaaaggagacaagggtgaacgagga
gataaaggagcgaaaggggacagaggtccaattgggccaaagggagattcgggctcgagc
tccagctcacgagttggagtccgtggggagaagggagaaccaggagaaaagggagcaaaa
ggtagtgcaggatttggctatcaaggaacaaagggagatactggcctcccggggccacct
gggccccccggccctccagggactgcagcggagtcaggaacctgtgaagatggctcgaat
gcttcatgtcccccaggacctcgcggaccagcgggtccacaaggtgccccgggaccccag
ggaccaccaggagccgatggggagcctggtgatcctggtgagaatggaagtaaaggccct
gaaggacctccaggcttcccaggaactccaggtgatagtggccctaaaggagagaaggga
gacagtggagaaggtccacccggtcccagaggacctccaggacccccaggacctccagga
ccaggaatcaaatctacgttcgtggacatggagggctcagggttaccagatcttgaatcc
attcggggaccccctggcctacctggtccccctggtccccctggccctcctgggacctct
acagtgggtacaggtcctggggcattcggaccaccgggaagggacggggcgcctggtcag
actggactacctggtccaccaggtgctgagggccaacaagggttctctggacccaaagga
gaaaagggcaactcaggtgatctggggctaccaggagcagtggggcagaagggagctccg
ggagttcctggtttaccgggacctggaggagaacctggactggctggtttacctggaccc
attggacctgctggaccggccggacctcctgggcttcctggacctcctggaccaagttat
cgtgttggatttgatgacatggagggctcaggtggaggttcaccacacagtgttcctggt
atcagaggacctgaaggaagacagggtccttctggcttgcctggacttccaggcaaacct
gggttccccggtctgccaggtcagaaaggcagtgaaggcactcgaggaagagacgggcag
ccgggattggatggcttcccaggccctcaggggtcaaagggggaaagaggtgacatagga
gagaggggtgagcaaggtcgagatggaactggactcccaggcccaccaggtccacctgga
caaccaggacaaatcatctaccgcacattaggcaatttggagggtgttgttggcagtatt
ggctctgagggagaaactggattacctggacaggctggattccctggccccgctggacca
aagggtgacaaaggggacattggcccttcaggctatggagcgaaaggggagaaaggcgag
ccgggattagtgatcggacccgatgggaatctactgtctctggaggggctaacaggtgtg
aggggagacagaggaccacctggaccagttggaccccctggccagtacgggcctcctgga
tttaagggtgaaattggaatgcctggtagacctggtcgtcctggtattaatggatacaag
ggtgagaaaggcgagccgggaggtggttcaggctatggctacccaggagttcctggacca
ccaggaccacccggaccccctggtccacccttttccttgggtcgcttcgatcactatgaa
acttcaaggaattacccagcaattaaaggggaaaaaggagagactggtgacccaggtctc
ccaggaatcccaggatcatcgtctaattttgatatttacacattaaagaatgaaatgaag
ggccagcgtggagaaacaggcctgaaaggagagaagggagagcccagcggcggatattat
gacccacatttcgtaggaacaaatggtccaccaggacttcctggcccacctggcctacag
ggtccaaagggagattccataagcggtcctcctggaccacaggggccaccagggacacca
ggaattggttacgatggacgtcaaggacctccagggccacctggacctccaggactccct
gctatctcaaatcctggaggaggaacattctctgtcagtgtccctggacctcctggtcct
cctggaccccctggaaatcctggcctctcttctggggttacagttttgaggtcctatgaa
acaatgattgctactgccagacggcaggcagagggcagtctcatctacatcatagacaac
ggcgacctttatctgagagtacggactggattgcggcaagtcatgctcggagactatact
cccttcttcagagatctggagaatgaggtgccagaggttcagtccccccctgtggtcctg
tatccccagtctcctgaccgctcttacaccaacggagctggccattactcagagagcggc
tctgtcatccgtcccattgaacctcttccacacccaccggtagaaccacccaggtaccct
ccgaagtatgagcccagattcccagactcaagaaacacaggccacactgatgggagactg
tcaacacaccagactggcggcaggtaccctgtcactccccagtggcaactcaacccacct
gtaccagagcctgctagccatgcggaaacttcaggaccagggctgcatctcatagccttg
aacgcacctcaaactggtaacatgcgaggtatccgcggggcagacttcctgtgcttccag
caggctcgtgctgttggcttgaaggggaccttcagggctttcctgtcttccaagcttcaa
gacctctacaccatcgtccgcaggtcggatagggacagcttccccattgtgaaccttaag
caccaggagctgttcagcagttgggagtctatttttggggacaatgcaagcacaattaag
gaggatgtaccaatctactcctttgatggtagagatatcctcagggacagtgcatggcca
gataaaatggtctggcatggatcaagcaacctaggccaccggcaaacagaccactactgt
gaaacatggcgggcgggcgaccgtgctgtgactggtctggcatcatcactacggagcgga
agtctcctgcagcaaacctccagtagctgctccagttcctacatcgtcttctgcatcgag
aacgcattcacgtcacactccaaataa
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integrated database retrieval system
