Antennarius striatus (striated frogfish): 137605667
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Entry
137605667 CDS
T10427
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137605667 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
astr01009
]
137605667 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
astr04515
]
137605667 (pcdh1a)
Protein phosphatases and associated proteins [BR:
astr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137605667 (pcdh1a)
Cell adhesion molecules [BR:
astr04515
]
Cadherins
Protocadherins
137605667 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
137605667
NCBI-ProteinID:
XP_068186439
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All DBs
Position
13:7105778..7203081
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AA seq
1190 aa
AA seq
DB search
MELNLQLVLFWVLVLHCFSSDGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFLSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL
FGLQVAEDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
TPKFEKSTYDAEVSENSPAGHSVLQVKANDSDMGPNGEIEYTLHQAVEPVPKLLRIDRST
GIIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVT
HIEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDFERVKDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQSGEKVLDVIASDADSGTNAELIYSIVADSSIKGLFEIDPNTGEVKARGPLDREHKE
RYEFRVTAADKGSPVHKGTATVAIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAMDGGEPPRS
SYVGVTINVLDENDNDPVITKPSNSSFRRLSPLASPDSHVEIVEAEDLDSGPNAELVFSI
AGGNPYQLFHISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARYATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKESKDLYAPKQVPKNAKGKRGKKGKTHKTPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAT
NTFVGTGGDDNSTGSDQYSDCSYKTSQPKYNKQHPHRRVTFSTANPVQDLQDASQHSYYD
SGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGNC
TTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLGGEEHRP
RLPPSRSAYSNSGHDASQDCPLEEMPLSVASEFPPTYSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaatttacaactagtgctattttgggtcctggtgctgcactgtttttcttct
gatggcagcatcctgtacagggtccaggaggagcagcctccaaacactttgattggtagc
ttggcagcagaccagggcctgccagattcaggtcatctctacaagctggaggtgggtgcc
ccttaccttcgcgttgatggaaagactggggacatttttaccacagagattccaattgac
agagagactttgagggactgccgatccctggtgaagggcaagccctgctacctggaattt
gaagtatcagtgacagatctgatacagaaccagagccctcgactgattgaaggacgcatt
gaggtacaggacatcaatgacaacactccacagtttctatcatctgtgctcacgatttct
gttcctgagaacacaatcatgggagctttattctccatacctctagctacagacagagac
tctgacagaaatggggtggcggattatgctctgactgcagggccagacgcagcaacccta
tttggtttacaggtggctgaagacaggggtgggaaactcccacagcttattgtcctggga
aaccttgatcgtgagttaaaggattcctacgacctgaccattaaggcagtcgacggagga
aaccctcagcgctacagcagtgctttgctaagagtggtagtaactgatgccaatgataac
actccaaaatttgaaaagtctacttatgatgcggaagtgtcagaaaacagcccagctgga
cactcagtgttacaggtcaaagcaaatgattctgacatgggccctaatggagaaattgag
tacacccttcaccaagccgtggaaccagtgccgaagctcttgcgaattgatcggtccact
ggaataatctatgtcaaaggaccactagacagggaggaaatcagcagcttgtccttttat
gtggtcgcaagggataagggtcctcaacctaaaagctctaagacttttgtaaccattgaa
gtgactgatcaaaatgataatgctccagctgtcgagatccgtgggattggcctggtgaca
cacattgaaggagtggctaacatttcagaagacatgccagtaggaacagccgttgctttg
gtgcaagtttcagacaaagatgagggagagaatgcagtggtcacatgcgtggttgcagga
gacgttcctttccaactccgccctgccagcgactcctccagtgacaacaagaggaagtat
ttcttgcagaccaccactcctcttgactttgaacgggttaaggattacagggtagagatt
gtggctgttgattctggaaatccagcactgtctagtacaaattctttgaaggtacaagtt
actgatgtaaatgataactccccaatattctctccgactttgtttgaagtagattttgcc
gaagaaaatcaatcaggagagaaggttttggatgttatagcttcagatgctgacagtggc
acaaatgcagaactcatctacagtattgtggcggattcatccattaaaggtctatttgag
attgacccaaatactggtgaagtgaaagcacgaggcccgcttgaccgtgagcataaagaa
cgctatgagtttcgggtcactgcggcagataaaggttcacctgttcataaaggaacagca
acagttgcaataaaagtccttgaccgcaatgacaatgatcccaagttcatgctgagtggc
tacagcttttccgttttggaaaacatgcctccacttagtccagttggcatggtcacagtt
ttggacatggacaaaggcgagaatgctcatgttcatctctctgtcgagcctgatggaggg
aagtttgttgttcaaaatggaacaggcaccattctgtcaagcatctcattcgacagggag
aaagaaagtagttacactttccgtctcaaagcaatggatggaggagagccaccaaggtct
tcgtacgtgggtgttaccataaatgtacttgatgaaaatgacaatgaccctgttatcact
aagccctccaattcatccttcaggcgcttgtcacctctagcttccccagatagtcatgtt
gagatagtggaagctgaagacctggatagtggacctaatgcagagctagtcttcagtatt
gctggtggaaacccttatcagttatttcacatctctccctccagtggcgagatcactcta
gcaaaagagatgacccgaaaacatggtggactacatcgactagtggtgcgagtgagtgac
aggggaaagcctgcaagatatgccactgccctggtccacatatatgtcaatgaaaccatt
tcaaatgtcagcttagtggaagctctagttggacacagtctttacacaccgctagacagg
gacattgctggtgatcctgacaatggctttgctgctcagcgaagtaatattttgtttgga
agccttgctggtgtggcaggtgtcgtcatgctgatactggtggtggtatttattcgacac
agaatccagagagaaactaagagtgggtatcaggctggcaagaaagaatcaaaagacttg
tatgcaccaaagcaggtcccaaaaaatgccaaaggcaaacgaggaaaaaaaggtaaaacc
cataagaccccaaaaccacttggggaagaggaggaagttagccttcaaaagagtctcaaa
ttcaaccttgacggagtcaatgatagccccaggatacacctgcccttaacatattcgcct
ggaagccctgacataggcagacactaccgctccaattcccctttaccctccatccagctg
caggcccaatccccttcagcctcacagaaacatcaggctgtacaggaccttcctgccacc
aacacctttgtaggaacgggaggagatgacaactctactggctcagaccaatactcagat
tgcagctacaagaccagccaaccgaagtacaacaaacagcacccccaccggagagtgacc
ttctccaccgccaaccctgtgcaggacctgcaggatgcctcacagcacagctactatgac
agcggtttggaggaatcagagactcccagcagcaagtcatcgtctggtcctcgcatcggg
ccactgaccctgcctgaggaccactatgagagaaccactccagatggcagcattggagaa
accgagcaccctgaaaatgatatccgttccctccctgacgtggcgatgaccggaaactgc
acaactgagtgcagcgaactgggacattcagatgcctgctggatgcccgggcatccctcc
cccgtgcgcaagaccaggaaccctccaaaactctccaccttcgtgccttaccaggagaga
gggagcctgggacgcctggcaaatggcagcgccaggctgggcggcgaggagcaccgaccg
cgccttccgccctcccgcagtgcctattccaacagtggtcacgacgccagtcaggactgt
ccccttgaggagatgcccctgagcgtagcctctgagttccctcccacctactccccttct
gcccacactccaaaaagagaaatttacctgtga
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