Antennarius striatus (striated frogfish): 137605886
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Entry
137605886 CDS
T10427
Symbol
smfn
Name
(RefSeq) small fragment nuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137605886 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137605886 (smfn)
03009 Ribosome biogenesis [BR:
astr03009
]
137605886 (smfn)
Messenger RNA biogenesis [BR:
astr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
137605886 (smfn)
Ribosome biogenesis [BR:
astr03009
]
Eukaryotic type
Pre-60S particles
RNases
137605886 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
137605886
NCBI-ProteinID:
XP_068186884
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All DBs
Position
13:complement(21626983..21630225)
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AA seq
266 aa
AA seq
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MSSCPRPAVQSLVPLLCRWTQLVFRSSPSVCHPHRGSVAHRGGTNTLTTRRTHRDSPGSQ
GARRRMSSAAMGQRMVWVDLEMTGLDIDKDQIIEMACIITDAELKVVAEGPNLIIRQPDE
LLDGMSDWCKQHHGQSGLTQAVRDSNITLEQAEYEFLSFIRQHTPPGQCPLAGNSVHADM
RFLQKYMPQFVHHLHYRIIDVSTIKELCRRWFPEAFKTAPQKKSTHRALDDITESIKELQ
YYKDHVFRRPSEVQKDRCVENGGSSQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgtgtccccgcccggcggtccagtctctggtcccgctcctctgcaggtggacg
cagcttgtgttccggtccagcccgtcggtatgtcacccacaccggggtagtgtcgcacac
agaggcggaacaaacacgttaacgacccggagaacacaccgcgacagtcccgggagtcag
ggggccagaagaaggatgtcatccgcggcgatgggccagaggatggtgtgggtggacctg
gagatgacaggtctggacatcgacaaggaccagatcattgaaatggcgtgcatcatcacc
gacgcggagctgaaggtggtggcagaggggcccaacctgatcatcaggcagccggacgag
ctgctggacgggatgtcagactggtgcaagcagcatcacggccagtcaggactgacccag
gctgtgcgggacagtaacatcacgctggaacaagctgagtatgagttcctgtccttcatc
agacagcacaccccccctggacagtgtcctctagctggtaactctgtgcacgcagacatg
aggttcctgcagaagtacatgcctcagtttgtgcaccacctgcactacagaatcattgac
gtcagcaccatcaaggagctttgcagacggtggtttcctgaagccttcaagacggcgcct
cagaagaaatcaacacacagggcattggatgacatcactgagagcattaaagaactacag
tactacaaagaccacgtgttcagacgcccgtcagaggttcagaaggacagatgtgtggag
aatggaggcagcagccagtga
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