Antennarius striatus (striated frogfish): 137606150
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Entry
137606150 CDS
T10427
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137606150 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137606150 (rabgef1)
Membrane trafficking [BR:
astr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
137606150 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
137606150 (rabgef1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
PIN_8
Motif
Other DBs
NCBI-GeneID:
137606150
NCBI-ProteinID:
XP_068187357
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All DBs
Position
13:complement(19495310..19501490)
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AA seq
515 aa
AA seq
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MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGAQPHSQTHSHPTPPHPHPGPASLGPFSKFEEKKTNEKTRKVTTVKK
FFSPSSRVAPKKENQEGKTPSPSNSRRTSFDMDQVSKDFVDFLKNLQKPGKEIHKQCRAF
IVNMSSKKDLSADELSECVQDFYQNMAERLMSHFKGSSESVEQVMDQVEKYIMTRLYKSV
FCPETTDDERKDLATQTRIRALRWVTIQMLCVSMEEDIPEVSENVVQAITDIIEMDSKRV
PRDKLGCVTRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCN
PSRLMTGEDGYFFTNLCCAVAFIEKLDAQSLNLSADEFERYMSGQASPRSNGSEADWSQT
DSAPGGAPINPVLAELNQNLETLSGLNCRQEAVMEAAQRLQDDLLTWTGGVQQEVNGALE
KYPLEILPRPVSALDDRNADSDNLPPPLTPQMSAG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacggagcgacgggggatacatgtggaccaatcagacctgttgtgcaaa
aagggatgcggttactatggcaatgcagcatggcagggcctgtgctccaagtgttggagg
gaggagtaccagcgggtccggcagaaacagatccaggacgactgggccttggcagaaaag
ctgcagcgagaggaggaggcggcgtatgccagtagtcatggagcacagccccactcccag
acccactcccaccccactcctccacacccacacccgggccccgcctctctgggacccttc
tccaagttcgaggagaagaagacaaatgagaagacacgcaaagtcaccaccgtcaagaag
ttcttcagcccttcatcacgtgtcgctcctaagaaagaaaaccaagagggcaagaccccg
agtccgtccaacagccgccgcaccagcttcgacatggatcaggtctccaaggacttcgtg
gacttcctgaaaaacctgcagaagcccggcaaagagatccacaagcagtgccgagccttc
atcgtcaacatgtcgagcaagaaggacctgagtgctgacgaactatcggagtgcgttcag
gatttctaccagaacatggccgaacgcttgatgagtcacttcaaagggtcgtcggagtcg
gtggagcaggtgatggaccaggtggagaagtacatcatgactcgtctgtataagagcgtg
ttctgtccagagaccaccgacgatgaaaggaaggacttagcgacgcagacgaggattagg
gccttgcgctgggtaacaatccagatgctgtgtgtgtccatggaggaagacatcccagaa
gtctctgagaacgtggtccaagcaataacagacatcatcgagatggactcgaagcgagtt
cctcgtgacaagctgggctgcgtcacccgctgcagtaaacacatcttcagcgccatccgg
atcaccaaaaacgagccggcgtccgccgacgacttcctcccggcgctcatctacatcgtg
ctgaaggccaaccccccccggctgcagtccaacatccagtacatcacccgcttctgcaac
cccagccggctgatgaccggggaggacggatacttcttcaccaacctgtgctgcgccgtg
gccttcatcgagaagctggacgctcaatccctcaacctctctgcggacgagtttgagcgc
tacatgtcgggccaggcgtcgccccgctccaacggctcggaggcggactggtctcagacc
gactcggcccccggcggagctcccatcaacccggtcctggccgagctcaaccagaacctg
gagacgctgtcgggcctcaactgccgccaggaggcggtgatggaggcggcgcagaggctg
caggacgacctgctgacctggaccgggggcgtccagcaggaggtcaacggcgctctggag
aaataccctctggagattctgccccgcccggtgtctgctttggacgaccgcaacgcggac
agcgacaacctgccgccccccctcacaccccagatgtctgctgggtag
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