Antennarius striatus (striated frogfish): 137606515
Help
Entry
137606515 CDS
T10427
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03030
DNA replication
astr03420
Nucleotide excision repair
astr03430
Mismatch repair
astr03440
Homologous recombination
astr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137606515
03420 Nucleotide excision repair
137606515
03430 Mismatch repair
137606515
03440 Homologous recombination
137606515
03460 Fanconi anemia pathway
137606515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
astr03000
]
137606515
03032 DNA replication proteins [BR:
astr03032
]
137606515
03400 DNA repair and recombination proteins [BR:
astr03400
]
137606515
Transcription factors [BR:
astr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137606515
DNA replication proteins [BR:
astr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137606515
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137606515
MMR (mismatch excision repair)
137606515
DSBR (double strand breaks repair)
HR (homologous recombination)
137606515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-C2H2_fungi_2
Motif
Other DBs
NCBI-GeneID:
137606515
NCBI-ProteinID:
XP_068187891
LinkDB
All DBs
Position
13:15953353..15985080
Genome browser
AA seq
625 aa
AA seq
DB search
MSGELTQGAVETLCRNSGVDNPVLQLLRIREVCNNSGPKRYRLMMSDGQKSGSSFILATQ
LNRLAEENLLKPNCVCKLKMTKTTTLPDGRVVVIVLDMDILQRAEETGGVIGNPIPLKIE
GQMSSSQEFASTSTSVPASPPSAAVPGPSSENNSKRPSPLGGNGTDLMGNSPTKASPSKF
SPLKGNNTSPGSSTKSVPIVHLNPYQSKWTIKARVTGKSNIRTWSNSRGEGRVFSFEVVD
ESGEIRIAAFNNEVDKFFPLVEQGKVYYISKGNLKVANKQYCTLKNDYEMTLHAYSSIVP
CDDSVGVPTVQCDFVPIAELEKKNVDTIIDVIGVCKSAEDVSLVVTRTCKEMSKRALNLV
DSTGKGVEVTLWGEEAEKFDSSGQPVVAIKGARLSDFGGRSVSVLFSSTVMVNPDIPEAF
RLRDWFDQKGHALNSQSLSGTKSVRDGDRMNWKSLSDIKNEHLGHREKAEFFNCVATLLH
SRKDSCLYQACPSADCKKKVTDQQNGLYYCNKCNKDFPNFKYGLILHANLADFGDNQWVT
CFQETAEVLLGHSAETLGRLQETDEAAFDEVFQKANFTTHIFSNKVKLETYNDETRLRVT
VMDVQPVDHREYSRRLLDNIHKLAQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaactaacgcagggggcagttgaaaccctgtgcagaaactcaggggtggac
aatccggtgctgcagctgctgaggatccgtgaagtctgtaacaactccggtccaaagagg
taccgactaatgatgagtgatgggcagaaatctgggtcttccttcattctggccactcag
ctgaatcgtctggctgaagagaacctgctgaaacctaactgtgtgtgtaagctgaagatg
accaagaccaccacactcccagatggaagggttgtggtcattgtgttggacatggacata
ttgcagagggctgaggaaactggaggggtgattggaaatcccattccattaaagatagaa
ggtcagatgtcatcctcacaggagtttgcctcgaccagcacatctgtcccggcctctcct
ccatctgctgcagtacctggaccctcctctgagaacaacagcaaacgcccttcccccctt
ggaggcaatggaacagatttaatgggaaattcacccacaaaggcttcaccctcaaagttt
tcacccttgaaggggaacaacacttcaccgggttcgtcaacaaagtcggttcctattgtt
cacctaaacccctaccaaagcaagtggactatcaaagcaagagtaaccggcaagtccaat
atccgcacgtggagtaactctagaggagagggcagagtgttctcctttgaagtagtcgat
gagagtggagaaatcagaatcgcagctttcaacaatgaagtggacaagtttttccctcta
gtggagcaaggcaaagtgtactacatctccaagggtaatctgaaggttgctaacaaacaa
tactgcacactgaagaatgactacgagatgaccctccatgcatattcatccattgtgcca
tgtgatgacagtgtgggtgtcccaacagtgcagtgtgactttgtgcccattgcagaactg
gaaaagaaaaatgtggacaccatcattgatgtgatcggagtatgtaagagtgcagaggat
gtatcacttgttgtcacgaggacttgcaaagaaatgtccaagagggccctaaacctcgta
gactcaaccggaaaaggggtggaagtcaccttgtggggggaggaggcagagaagtttgac
agctctgggcagcctgtggtcgccatcaaaggtgctcgcttgtctgatttcggcggcaga
tctgtctcagttttgtttagctctacagtcatggtcaacccagacataccggaggccttc
agactgagagattggtttgaccagaaaggccatgcactcaacagccaatcactgtcaggg
acaaagtcggtgcgggatggagatcgcatgaactggaaatcactgagcgacatcaaaaac
gaacacttgggacatcgagagaaggcagagtttttcaactgtgtggcaacattgctgcac
agtcgcaaggacagttgtctgtaccaggcctgcccttctgcagactgcaaaaagaaggtt
actgaccaacagaacggactgtactactgcaataagtgtaacaaggactttcccaacttt
aaatacggactcattcttcatgccaacttggcagacttcggggataaccagtgggtgaca
tgtttccaggagacagcagaggtcctcttaggtcacagtgcagaaacattgggacggctc
caagaaacggatgaggcagcgtttgatgaagtcttccaaaaagccaacttcacaactcac
atctttagcaacaaagtcaagctggagacatacaacgatgagactcgactgagagttact
gtaatggacgttcaaccagtcgaccacagagaatacagcaggagactccttgacaacatc
cacaaactggcccagtga
DBGET
integrated database retrieval system
