Antennarius striatus (striated frogfish): 137606552
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Entry
137606552 CDS
T10427
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03440
Homologous recombination
astr03450
Non-homologous end-joining
astr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137606552 (rad50)
03450 Non-homologous end-joining
137606552 (rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
137606552 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astr03032
]
137606552 (rad50)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137606552 (rad50)
DNA replication proteins [BR:
astr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
137606552 (rad50)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
137606552 (rad50)
BRCA1-C complex
137606552 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
137606552 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
zf-met
AAA_16
AAA_29
AAA_22
AAA_13
Motif
Other DBs
NCBI-GeneID:
137606552
NCBI-ProteinID:
XP_068187944
LinkDB
All DBs
Position
13:complement(14366716..14393606)
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AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQVISFFDPLTVLVGPNGAGKTTIIECLKYATSGELPPG
SKGGVFVHDPKDAHETDVRAQIRLLFTDVNGERVTIQRSMSCTQKAKNYSFKSLEQVITR
IKDGEKVSLSSKCSDLDREMISSLGVSKPVLNHVIFCHQEDSNWPLSEGKALKEKFDSIF
AATKYIKALETMRQLRLKQSQTVKECQLELRYLKQNKEKAQQIAEMVSTKEAQLMASKDS
IQKIENQIDPMESRLSDIDMKLGKVMKLDNDIKALDSRKKQMEADNKELEETMEQVFQGS
DEQLQEIYQNHQRTVREKECRLTDCQKELEKAGRECQKLNRVKADLLVEQGRLQLEADRH
AQNIRNRDTQVRSLSSYLEMEGYDRPPFTNLQLQSFHQHVTERLGLEKETVSHAVADLQA
KEQQKQQSIDEMRDKKTRLERTVELKRDMQGKKQQELRNIRTELQRLEGSSSRLQELESE
LAKVERDLQSAVQSSNVEELKVEVVELQKEKGELERAQKQLDKEMETLNTHTTARTQMDM
LQREKMEKEDQVRKIKSRHSEDLVSLLGHFPNKRELEDWIYARSKEVNGTRDRLAKLNKD
LASSEQNKNHIATELRKKEQQLSIDEEKFFNVCGSQDLEQDLGKLQEDLEKVSKQRAMLA
GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK
RKERKRDDMVALRPVRLSIVQTQEKELPELRNRLQTVNREIERLKGDVEEQETLLAALMS
EEDTAKACLQDISLMDRYLLDLKEVERRIAQHAAKLQGVDLTRTIQQVSQEKQETQHKLD
TTSSKMELKRKLIQDQQDQIQMLKSAVNETREEKLQLSSDMQKRQQLEQQCVEFTTELQA
LTRDIRESKEQLSPLSTALEKLQQEKQELVERKRQKQEEGQEKISAIKERVKMITALDKE
ITKYGDEGKDEYKEQKESELQETNTQLHEAEKNKEKINKEMGNIRQDIDTQKVQERWLQD
NLTLRKRVEELKEVVAKREALLTDMGNMQVLQLRQERREGEHKLEDLKKTRSIALGRQKG
FEEEILQYKKELRDDQYDKADERYKNKMIKMRTTELVIKDLDLYYKALDQTIMKFHSMKM
DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVRRRIYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRDNIESLAHALVEIIKSRSRQR
NFQLLVITHDEDFVELLGRSSYIEHFYRIRKNHNQNSEIIKCSITSLSSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatagaaaagatgagcatccttggagtgaggagctttgggattgaggataaa
gacaaacaagtcatttctttcttcgatccacttactgttctggtcggacctaatggagca
gggaaaacgaccatcattgaatgccttaaatatgcaacatcaggagaacttcctcccgga
tctaaaggaggtgtttttgttcatgatccaaaggatgcccatgagacggatgtgcgagca
cagattcgacttctattcaccgatgtcaatggagagagagtgactatccaacgctccatg
tcctgcactcagaaggctaagaattactccttcaaaagcttggagcaggtcatcacgaga
ataaaagacggtgagaaggtgagcctttcatcaaagtgcagtgacctggatcgggagatg
atttcttctctgggtgtgtcaaagcctgtgctcaaccatgtcatcttttgtcatcaagaa
gactcgaactggcctcttagtgagggcaaagcactcaaagaaaagtttgactccattttt
gctgcaacaaaatatattaaagctctggaaacaatgcgtcagctgcgccttaaacagagt
cagactgtcaaagagtgtcagttggagctccgttacttgaagcagaacaaggagaaagcc
caacagattgcagagatggtttccaccaaggaggctcagctgatggcctctaaagacagc
attcagaagatcgagaaccagattgaccccatggagagtcgactgtcggatattgatatg
aaactcggaaaagtgatgaagctggataacgacatcaaggctttagacagcaggaagaaa
cagatggaagcagacaacaaggagctggaagaaacaatggaacaggtcttccaaggctca
gatgagcaactgcaggagatttaccagaaccaccagaggacagtgagggagaaggaatgc
aggctgacagactgccagaaggagctggagaaagctggacgagagtgtcagaaactcaac
agagtcaaggcagatttattggtggaacaagggcgtctacagctagaggctgaccgccat
gctcaaaatatcaggaaccgtgacactcaggttcgctctttgtcgtcctatctggagatg
gaaggttacgaccgaccgcctttcacgaacctgcaacttcagagcttccatcaacacgtg
acagagagactaggtctggaaaaagagaccgtcagtcatgctgtggcagacctgcaggcc
aaagagcagcagaagcagcagtccatcgacgagatgagggacaagaagactcgccttgag
agaaccgtggagttaaagagagatatgcagggaaaaaagcagcaagaactaaggaacatc
aggacagagctgcagaggctagaaggctcatcaagccgactgcaggagctggagagcgaa
ctggctaaagtggagcgtgacctgcagagcgcagttcagagctctaatgtagaggagctc
aaggttgaagtcgtggagctccagaaagaaaagggagagcttgaacgcgctcagaaacag
ctggacaaagagatggagactctcaacacacacaccactgcacgcacgcaaatggacatg
cttcaaagggagaagatggagaaggaggatcaggtacgtaagataaagtctcggcacagt
gaagatttggtgtcactgctgggccactttcctaataagcgagagctggaggactggatc
tatgcccggtcgaaggaagtcaatggtaccagagacagacttgccaaactcaataaggat
ctggcatcgagtgaacagaataaaaaccacattgctactgagttacgtaagaaggagcag
cagttatccatcgatgaagagaagttctttaatgtgtgtggcagtcaggatcttgaacag
gatctgggcaaattgcaagaagatctagagaaagtctccaaacaaagagccatgctagct
ggagccacagcagtgtacacccagttcatcagccagcttacagaagagcgggagccctgc
tgcccggtgtgccagcgaacgttcccctcagaatctgatctgcaggaagtcatcagcgac
atgcagtccaaactacgcctggtgccagacaagctgaaaaacacagagcaggatctgaaa
aggaaggagaggaagagagatgacatggtggctctcagacctgtcagattgtctattgtg
cagacccaggaaaaggagttacccgaattaaggaaccgcctacagaccgtaaacagggaa
attgagaggttgaagggagatgtggaggagcaggagactctgcttgctgccctgatgtca
gaggaggacacagccaaggcctgcctacaggacatctctctcatggacagatacctgttg
gatcttaaggaggttgagaggagaatagctcagcatgcagccaaactccagggagtagac
ctgaccagaaccatccagcaagtcagtcaggagaaacaggaaacccagcacaagttagac
accacctccagcaagatggagctgaaacgtaaactgatccaggaccagcaggaccagatt
cagatgctgaaaagtgctgtaaatgagacaagagaagagaaactccagcttagcagtgat
atgcagaaacggcagcagctggagcagcagtgtgttgagttcaccactgaattacaggcc
ttaaccagagacatcagggaatcaaaggagcaattgtctcctttatctactgctctggag
aagctgcagcaggagaagcaggagctggtggagcgcaaaaggcagaagcaggaggagggg
caggagaagatcagtgctattaaagaaagagtgaagatgatcacagccttggacaaagaa
atcaccaaatacggtgatgaaggcaaagatgaatacaaagagcaaaaagaatctgagctt
caagaaaccaacacccaactccacgaggcagagaaaaataaggagaagatcaacaaagag
atgggaaacatccgtcaggacatagatactcagaaggtgcaggagcgctggttgcaggac
aacttgaccttgagaaagcgtgttgaggagttgaaagaggtcgtggctaagcgggaagct
cttttgacagacatgggcaacatgcaagtcttacagctgcgccaagaacgacgagaaggg
gaacacaagttggaagacttgaagaagacacgcagtattgccttgggtcgtcaaaaaggc
tttgaggaggagatattgcaatacaaaaaagagctgcgagatgatcagtatgataaagct
gatgagcgttacaaaaataaaatgatcaaaatgaggaccacagagttggtcattaaagac
ctggatctctactacaaggcccttgatcaaaccattatgaaattccacagcatgaagatg
gatgaaatcaacaagattatcagagacctgtggcgcagcacctacaggggtcaagacatt
gagtatgtggaaatcaggtctgatgtggatgaaaactcctctgctggcgtaagacggagg
atctacaactacagggtagtcatggtgaaaggagatacagctttggacatgagaggacgc
tgcagtgctggtcagaaggtgttggcgtccctgatcatccgtttggctctggcagagacc
ttctgtctgaactgtggcatcctggcgttggacgaacccaccaccaacctggaccgagac
aacattgagtcactggcacacgccctcgtggaaatcatcaaaagccgttctcgccagcgg
aacttccagctactggtcatcacccacgacgaggactttgttgagctgctgggtcggtcc
agctacatcgagcacttctaccgcatccggaagaaccacaaccagaactctgagatcata
aagtgcagcatcacctcattgtcatcctacctccactga
DBGET
integrated database retrieval system
