Antennarius striatus (striated frogfish): 137607189
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Entry
137607189 CDS
T10427
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03250
Viral life cycle - HIV-1
astr03272
Virion - Hepatitis viruses
astr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137607189 (pdcd6ip)
03272 Virion - Hepatitis viruses
137607189 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137607189 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137607189 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
astr04147
]
137607189 (pdcd6ip)
Membrane trafficking [BR:
astr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
137607189 (pdcd6ip)
Exosome [BR:
astr04147
]
Exosomal proteins
Proteins found in most exosomes
137607189 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
DUF2226
AAT
Snapin_Pallidin
COG3_N
Motif
Other DBs
NCBI-GeneID:
137607189
NCBI-ProteinID:
XP_068188861
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All DBs
Position
14:5136410..5149690
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AA seq
879 aa
AA seq
DB search
MATFISVPLKKTSEVDLVKPLSKFITTTYSTSEEQGEYLRAVEELNKLRKSAVGRPLDKH
ESSLDILLRYYDQLCAVEPKFPFSENQLCLTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNAAALASQIASEQNLDSEEGLKNAAKFYQLASGAFGHIKDTVLTSLNREPTMDISP
ETVGTLSIIMLAQAQEVIFLKATSDKMKDAVIAKLANQAADFYGDAYKQCQYKDNLPKYF
YFQEVLSVLAAKHCIMQANAELHQSAVAQKKKCYGEEIARLQHSAELVKKVASHYDEYVS
VKDLSDKINRLLAAAKKDNDFIYHDRVPEIKDLDHIGKAAVVKATTMKNPLSQKFTDLFE
KMVPMMVQQSMSMYNQRKAETVNRLVGTMREATNLCNGVLASLNLPAALEDLSGDSIPQS
IAEKARSIVQQGGLQSIEQLIRDLPELLTRNREILDEAFKMLNDEETTDNELRAKFNQRW
NRTASGDLYKPLRTEGANFRSILDKAVQADQVVKDRYNTHCEMIALLCKPENELNAAIPS
ANPIKTLQGSEVVNVLRSLLAQLDEVKKEREILEGEIKAVTFDMSVTFLTALAQDKAINE
EQLSVSQLDQLYGTYKEKVQTSTRRQEELLGQVQTSYQEFSSLKQSNSEANQREEVLKKL
ASAHDSYVEITNNLQEGTKFYNDLTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSFNVPAYQSAPAAPPSGPTPAPRTVFTQQDPGQPQAKPQPPARPPPPTVTPHAASS
APTNTPPTGPPTGTGNPPPMAPPNQAQGPPYPSYQGYPGYYQVPVGYHPYPYAQFNMPYV
PYQTTPGQAGYPGAAPAGPGQPYPGYPPQPPQQQYYPQQ
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttcagtcccgttaaagaagacttcggaagtggacctggtgaaacct
ttgtcgaaattcataacaaccacatactcgacaagcgaggaacaaggggagtatctgcgc
gccgtggaggagttaaacaagctccgcaagagcgcagtggggaggccgctggacaaacac
gagagctccctggatattctgctaagatactatgaccagctctgcgctgtcgagcccaag
tttcctttctctgaaaatcagctctgcttgactttcacatggaaggatgcctttgataaa
gggtcgttgtttggtggctcagtcaagcttgctttagccagtttgggctacgagaagacg
tgtgtgttgttcaacgccgcagcgctcgccagtcagatcgcctcagagcagaacctggac
agcgaagagggactgaagaacgcagccaagttctatcagctggccagtggagcctttggc
cacatcaaggacacagtgctgacatcactgaacagggagcccaccatggacatctctccc
gaaactgtcggtaccttgagcatcatcatgctggcccaggctcaggaggtcatcttcctc
aaagccacatcagacaagatgaaagatgctgtcattgcaaagttagccaatcaggcagcg
gatttctatggcgacgcctacaagcagtgccagtacaaagacaaccttcccaagtatttt
tattttcaggaagtgctgtcggtgctggccgccaagcactgcatcatgcaggccaacgcc
gagctgcaccagagcgccgtggcccagaagaagaagtgctacggggaggagattgctcgg
ctgcagcactcagcagagctggtaaagaaagtggcgtcccattacgatgaatacgtgagc
gttaaggacctgagtgacaagatcaaccgtttactcgctgcagccaaaaaagacaatgac
ttcatttaccacgaccgcgtgcctgagataaaagatctggatcacatcggcaaagcagcg
gttgtcaaagcaaccacgatgaaaaatccactcagccagaaattcacagatttgtttgag
aagatggtccccatgatggtgcagcagtccatgagcatgtacaaccagaggaaagctgag
acggtcaacagactggtgggaaccatgagggaggccaccaacctctgcaacggggtgctg
gcatccctcaatctgccagctgctctggaggatctgtcaggagactctatcccacaatcc
attgctgagaaggcgcggtccatcgtgcagcagggtggactgcagagcatcgagcagctc
atcagagacctgcctgagctcctgacgcgcaaccgagagatcctggatgaggctttcaag
atgctgaatgatgaagagacgacagacaacgagttgagagcaaagttcaaccagcgatgg
aacagaaccgcatctggtgacctttataagccccttcgtacagagggagctaatttccgc
agcatcctggacaaggccgttcaggcggaccaggttgtgaaagaccgctacaacacgcac
tgcgagatgatcgccctgctgtgtaaaccagagaacgagctcaacgctgccatcccctcc
gccaaccccatcaagactctgcagggcagcgaggtagtgaacgtgcttcgctccctgctg
gcccagctggacgaggtgaagaaggagagggagatcctggagggggaaatcaaagccgtg
acctttgacatgtcggtcaccttcttgacggcgttggctcaggacaaggccatcaacgag
gagcagctgtcggtcagccagctcgatcagctgtacggcacttacaaggagaaggtacag
acaagcaccaggaggcaggaggagctgctgggacaagttcagacgtcctaccaggagttc
agcagcttgaaacagtccaactcggaggctaaccagagggaggaggtgctgaagaagctg
gcttcagctcacgacagctacgtggagatcaccaacaacctgcaggagggcaccaaattc
tacaacgacttgacagaaatcctgctcaagttccagaacaaatgcagtgacatcgttttt
gctcgcaaaacagagcgggatgaactacttaaggatctgcagcagagcatcgcccgagaa
cccagcgctccatcctttaacgtcccagcgtatcagagcgccccggcggccccccccagc
ggccccacgcctgcccccagaactgtctttacccaacaggaccccgggcagccccaggcg
aagccccagcccccggccaggccccctccaccgaccgtcaccccacatgcagcttccagc
gctcccaccaacacgccaccgaccggtccccccaccggcaccggcaacccaccgcccatg
gcccctcccaaccaggcccagggccccccttaccccagctaccagggctacccagggtac
tatcaggtgcccgtgggataccacccctacccttacgcccagttcaacatgccctacgtg
ccctaccagacgactcccgggcaggcggggtacccgggagccgctcccgctggacccgga
cagccttaccccggttaccccccgcagccgcctcagcagcagtactaccctcagcaataa
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