Antennarius striatus (striated frogfish): 137608057
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Entry
137608057 CDS
T10427
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137608057 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137608057 (nup54)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137608057 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
137608057
NCBI-ProteinID:
XP_068190174
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All DBs
Position
15:20033225..20040694
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AA seq
582 aa
AA seq
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MAFTFGGATANLATNTSGFSFGSFGAKTTAPTAFGFGTPAATTTASSGFGTLTAPGFGAA
TTTAAAPATGFGFGSTSTGFGGLGAGSTTAGAFGGFGTTTTTAAAPGSTFSFAAPANTTG
GLFGNTQNKGFGFSSGLTAGATTGTTGFGAGLGTTGLGGFGGFGIQPAQQQQQGLFGQQA
QQPGQNQATQLFQQATALSALNLLGDERNSILVKWNQLQAYWGTGKGYYSNNNPPVEFTQ
ENPFCRFKAVGYSCVPVSKDEDGFVVLILNKKEADVRAQQQQLVESLHKILGSNQTLSVN
VDGVKALPNDQTEVIIYLVERSPNGTSKRIPSTTLFNFLEQANIKVQLTQMGVAMSVTRT
ELSLTQLKQLLQNAPAGVDPIIWEQAKVDNPEPEKLIPVPMVGFKELLRRLQIQEQMTKQ
HKTRVDIISSDISELQKNQATRVAKIAQYKRKLMDLSHRALQVLIKQEMQRKSGYAIQVD
EEHLRVQLDTIQSELDAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQH
LKQQQEGLSHLITVIKDDLEDIKLIEHGLSDSGHLRGGGVLS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcacgtttggcggcgccaccgccaacctagcgacaaacacttccgggttttca
ttcggttcgtttggcgccaaaacgacagcaccgacagccttcgggtttggaactccagcc
gccaccaccaccgcctcatccggattcggcactcttaccgcccctggtttcggggcagcc
actaccactgctgctgcaccagccacaggatttggttttggctccaccagcactggattt
ggggggctgggagctggaagcaccacggctggtgcgttcggaggctttgggacgaccaca
acgactgccgccgcaccggggtcgacgtttagctttgcggctccagctaacaccacggga
ggcttgttcggtaacacacagaacaaaggcttcgggttctcctctgggctgaccgccggg
gccacgaccgggacaacggggtttggagctgggttaggaaccactggcctgggggggttt
ggaggcttcggtatccagccggcccagcagcagcagcaaggtttgttcggccagcaggca
cagcagccgggtcagaaccaggccacccagctgttccagcaggccaccgccctgtcggcg
ctcaacctgctgggagacgaacgcaactccatcctggtgaaatggaaccagctgcaggcc
tactggggcaccgggaagggttactacagcaacaacaacccccccgtggagttcacccag
gagaacccattctgcaggttcaaggcggtgggctacagctgcgtcccggtgagtaaagac
gaggacggattcgtggtgttgatcctgaacaaaaaggaagctgacgtgcgagcccagcag
cagcagctggtggagtccctccacaagatcctggggagtaaccagacgctctccgtcaac
gtggacggggtcaaagccctgcccaacgaccagacggaggtgatcatctacctggtggag
cgttctcctaacggcacctccaagcggatcccctccaccacgctcttcaacttcctggag
caggccaacatcaaggtgcagctcacgcagatgggcgtggccatgtccgtcacgcggacg
gagctgtccctgacgcagctgaagcagctgctgcagaatgcccccgcaggagtggacccc
atcatctgggagcaggccaaggtggacaacccggaaccagagaagttaatcccagtaccg
atggtgggttttaaagagctgctccgccggctgcagatccaggagcagatgaccaaacag
cacaagacccgagtggacatcatctccagcgacatcagcgagctgcagaagaaccaggcc
accagggtggccaagatcgcccagtacaagaggaagctgatggatctgtcccacagagcg
ctgcaggttctgatcaaacaggagatgcagaggaaaagcggctacgccatccaggtggac
gaggagcatctccgcgtgcagctggacaccatccagtctgaactggacgcccccacgcag
ttcaagggccggctgaacgaactaatgtcccagatccggatgcagaaccacttcggggcg
gtgcgttcagaggagcgctacagcgtcgacgctgacctgctcagagagatcaaacagcac
ctgaaacagcagcaggaaggcctgagtcacctgatcaccgtcatcaaagacgacctggag
gacatcaagctcatcgaacacgggctcagcgacagcggccacctgagggggggcggcgtc
ctgagctga
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