Antennarius striatus (striated frogfish): 137608075
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Entry
137608075 CDS
T10427
Symbol
exosc10
Name
(RefSeq) exosome complex component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137608075 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137608075 (exosc10)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137608075 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
137608075
NCBI-ProteinID:
XP_068190209
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All DBs
Position
2:17974229..17983424
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AA seq
892 aa
AA seq
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MASTSNNNATNSTLQNTNSDTNDEEKAELCPGFKDVDAFVKYGLGAVLSATKASAALPQA
GDEFDFYRSFSGFQEFCASQGDKLLHCMSQVMQHHGCRSHLRGQSKLTGLDESFDLVVDS
NDIILERVGILLDEADGVNRSQQPVMPAGFQPPKIVVSSWNRKGTGSDSRSAMFRLLHAK
NVARPQLKFKEKVDNSNTPFIPKIFIKPNAIQPLPSYFTDKQIRKEKSEDLDVPTALADF
IHQQRTQEHVDDMFAHPYQYELDHLTIPESLLSKPELQMYKPLPETKCSFITTLEDLVAL
NEKLCKSSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNEAFTDPA
IVKVFHGADSDIEWLQRDFGLYVIRLFDTHQASRALNQARHSLDHLLTHFCNVASDKRYQ
LADWRIRPLPDEMVQYARADTHYLLYIYDCVRAQLLDFNHGQSGLLKCVWNKSRDISLKK
YMKPIYTEESYLELQRKQKRSFNTQQLTAFRLLFAWRDKLARQEDESTGFILPSHMMIKI
SEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQARETPLLKTETAALKNKGLTPIRKP
EVTFFGPHDTSRVSESDLHPFSPDELPVKQGMLFSDDENRMDVDPQKTNGLMAVAKVTLF
EEQEPRNDEGCVTVAKTKARRIIESFENPFRMYLPSGEAHINKNAKFDPSSKIFEISKKW
KLMSIEQQQKEMEAKRNAKREAKEHAKKVTEERNKVKQDYKTSLQNVATVRQQAVKSTKE
TAKKRLSSEIGESTPKPSKKLTKSAEKSQKTEPSPGEGFKPFDYSQSDLKVFAGTKTKDN
AMFDPNRQARDAKKKKIPKGQKSNFGAGGRSMSYVAGTSNRGFRHNWKNKQQ
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacgagtaataataacgccacgaacagtacccttcaaaatacgaactcagac
actaacgacgaggaaaaagccgagctgtgtcctggttttaaagacgtggacgccttcgtt
aaatatggactgggtgctgtattatctgccaccaaagcatctgctgccttgcctcaagct
ggggatgaatttgatttctataggagcttctcaggcttccaggagttctgtgcaagtcaa
ggggataagctcctgcactgcatgagccaggtaatgcagcaccatggctgcagatcccac
ctgagaggccagagcaagctgacaggcctggatgagagtttcgacttagttgtggactca
aatgacatcattctcgaaagagtggggattcttcttgatgaagctgatggagtgaatagg
agccagcagcctgtaatgcctgctggatttcagcctcccaagattgttgtttccagctgg
aatcgcaagggtacaggctccgacagtcgttctgctatgttccgactgctccatgccaag
aacgttgcgaggcctcagctgaaattcaaggagaaagttgacaacagcaacacaccattt
atccccaagattttcatcaagcctaatgctatacaacctcttccatcttatttcactgac
aaacaaattcgtaaagagaagtcagaggacctcgatgtcccgactgctctggctgatttc
attcaccagcagagaactcaggaacacgttgacgacatgtttgcacacccgtaccaatat
gaactggaccatcttacaatcccggaaagccttctgtcgaagccagagctacagatgtac
aaacctttgcctgagaccaagtgttcattcattactacactggaggacctggtggctctg
aacgagaaactatgtaaatcttctgaatttgctgtggatcttgagcaccattcctacagg
agctttctcgggatcacctgtctaatgcagatctccaccagagaggaggatttcatcatt
gataccctggagcttcgcagtgaaatgtacatcctgaatgaggcattcactgatccagct
attgtcaaggtgtttcacggtgccgactctgacatcgagtggctccagagggactttggt
ttatatgtgatcaggctttttgacacgcatcaggccagccgagccctgaaccaggccaga
cattctcttgaccacctgctcactcacttctgcaacgtggcctcggacaaacgctaccaa
ctggctgactggagaattcgccctttaccagatgagatggtgcagtatgcccgtgcggat
acacactacctactgtacatctacgactgtgtgagggcgcagctgctggacttcaatcat
gggcagtctggccttctgaagtgtgtctggaacaagagcagagacatttccctgaagaaa
tatatgaagcctatatacacagaggagtcgtatctggagctgcagaggaagcagaaaagg
tcttttaacacccagcagctcactgccttccgattgctgtttgcctggagggacaaactg
gccagacaagaggacgagagcaccggattcatcctgccttctcatatgatgatcaaaata
tctgaggagctgccaaaggagcctcagggcatcattgcctgctgtaaccctgtacccccg
ctagtccggcagcaggtcaatgagctccatttgctcgtgcagcaggccagagaaaccccc
ctccttaagactgagaccgcagcgctaaaaaacaagggactcacacctattagaaagcca
gaggtcacattctttggtccccatgatacatccagagtatcagagagtgatctccacccg
ttttctccagatgagctgccagtgaaacaagggatgctcttctcagatgatgaaaacaga
atggatgttgatccacagaaaacaaatggtctcatggcagtagcgaaagtcacactgttc
gaggagcaggaaccgagaaatgatgaggggtgtgttactgtggctaaaacgaaagccaga
cgtattattgagtcttttgaaaaccctttcaggatgtatttaccctccggtgaagcacac
ataaacaagaacgccaagtttgatccatcttcaaaaatttttgagatcagtaaaaaatgg
aagctaatgagtatcgagcagcaacagaaggagatggaagccaagaggaacgccaaaaga
gaagcaaaagagcatgccaagaaagtgaccgaagaaagaaacaaagtcaaacaggactat
aagacgtctctccagaacgttgccactgttcgtcagcaagcagtgaagtctacaaaagaa
actgcaaagaaaaggctttccagtgagattggagagtcgactcccaaaccaagtaagaag
ttgaccaagtctgcagagaagtcccagaagacagagccgtctcctggagaaggcttcaaa
cccttcgattacagccagtcagaccttaaagtatttgctggtaccaaaacaaaggataat
gcaatgtttgacccaaaccgacaagcccgtgatgctaagaaaaagaaaattcccaaggga
caaaagtctaattttggagctggaggccgaagcatgtcctacgtggcaggaacatctaat
agaggattccggcataactggaaaaataaacaacaataa
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