Antennarius striatus (striated frogfish): 137608217
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Entry
137608217 CDS
T10427
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137608217 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137608217 (prpf4)
Spliceosome [BR:
astr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137608217 (prpf4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Ge1_WD40
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_like
Beta-prop_WDR11_1st
Beta-prop_SPT8
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
137608217
NCBI-ProteinID:
XP_068190494
LinkDB
All DBs
Position
15:complement(14073845..14079037)
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AA seq
510 aa
AA seq
DB search
MSDEEDSAPPMKKSRVFYGSLEEKERERLSSAMTSGVVFRSDALKAGIKAGHINISSGET
LEIEERVSERQQEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRER
LRNILSVVGPDALKKSRRDEERSKRSQEECQQTWYHEGPATLRDARLWLAKYSLPRAMRR
LETARSQKDVAEATKVVRQQELHKSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWS
GLCKLWSVPDCNLIRTLRGHNTNVGAVVFRPQAGISLDQSDVNLASCAADGSVKLWNLES
DEPVADIEGHSERVSRVAWHPSGRFLGTTSYDHSWRLWDLDVQEEILHQEGHSKGVHDLH
FHPDGSLVATGGLDAFGRVWDLRTGRCVVFLEGHLKEIYSINFSPNGHHLATGSGDNTCK
VWELRNRRCLYTVPAHQNLLSAVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHE
GKVMGVDISPDGKLIATSSYDRTFKLWVSE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaagaggactccgctccacccatgaagaagagtcgtgtcttctatggaagc
ctggaggagaaggagcgagagcgcctgagttcagcgatgacgagtggtgtggtgttcaga
agcgacgccctgaaagcagggataaaggcaggacacatcaacatttcttcaggagaaact
ctcgagatagaggaacgtgtcagtgagcggcagcaggaagcacttgctgcatttgaacgg
cgtcggcgagcgcgacaaatcactgtgtccactgacgacgctgaggtgaaggctggcctc
cgagcgctgggagaaccaatcactttatttggagaaggaccagctgaccgtcgcgagaga
ttgaggaacattctgtctgttgttggtccagacgctctgaagaagtccaggagagatgag
gagagatccaagagatcacaggaggagtgccagcagacatggtaccacgaaggtcctgcc
accctgagggatgctcgactctggttggctaaatattctctgccacgggcaatgaggcgt
cttgagactgcccgcagtcagaaggatgttgctgaggcaactaaggttgtccgacaacaa
gagctgcacaagagcctgaggaacctcaacaacttctgcagtcaaattggcgatgatcga
ccaattagcttctgccacttcagccctgattccaaaatgctggccactgcttcctggagt
ggtctctgtaagctgtggtctgtccctgattgcaacctgattcgtacactcagaggacac
aacacaaatgtgggcgcagttgtcttccgcccacaggccggcatctctctcgaccaatca
gatgtcaacttggcctcatgtgctgctgacggctccgtcaagctgtggaacctggagagt
gacgagccggtggcggacattgagggacacagtgaacgagtatctcgtgtggcttggcat
ccctctggaagattccttgggacgaccagctacgaccattcatggcgtttgtgggatttg
gatgttcaggaggagatccttcatcaggaaggtcacagcaaaggtgtccacgacctccat
ttccaccctgacggatcgctagtagctactggagggctggatgcttttggtcgggtttgg
gaccttcgaacagggcgttgtgtcgtcttcctggagggacacctgaaggagatctacagc
atcaacttttcccccaacgggcatcacctggcgactggaagtggtgacaacacatgtaag
gtttgggagctgagaaacaggaggtgtctgtatacagtccccgctcaccagaacctgctg
tcagccgtccgcttccagcccacggatggtcacttccttttgacgggagcgtatgacaac
acagcaaaggtttggagtcatccaggctggacgccactgaagacactggctggacacgaa
gggaaggtgatgggagttgatatatcgccagacggtaaactgatagcgaccagttcctat
gaccgaacattcaaactgtgggtgtctgaatga
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integrated database retrieval system
