Antennarius striatus (striated frogfish): 137608239
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Entry
137608239 CDS
T10427
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
astr03021
]
137608239 (chd1)
03036 Chromosome and associated proteins [BR:
astr03036
]
137608239 (chd1)
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137608239 (chd1)
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
137608239 (chd1)
SLIK complex
137608239 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CHD1-like_C
CDH1_2_SANT_HL1
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
137608239
NCBI-ProteinID:
XP_068190557
LinkDB
All DBs
Position
15:1910906..1927367
Genome browser
AA seq
1830 aa
AA seq
DB search
MAGRNEDESVSNSSGESSNSDDESGSASGSGSGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDTEKPKEKTEQPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQKQRQSSSN
SGSDEDSSSSDDSNSSSDSKRRRNSGSSDSGSGSDSGSGSGSDSSAEDNSDETVSDYEPS
HKIKSRKPPTKMNFRNGKKSSIQRKKAQKGSSSEDEDDCYKKVASAGPRRQATVNISYKE
DEELKTDSDDLVEVLGEDVPQLEEDEFETLERVMDSRIGRKKATGSATTVYTVEADGDPN
ANFNPNKEAGELQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQEKRKWLK
SASPEDIEYFNCQEELMDDLHSQYQLVERIIGELFTTYRMKNTQTWTGRTKQTFCTGHSN
QKSAAGYPDYLCKWQGLPYSECSWEDGALISKKFQKCIDDYMSRNQSKTIPSKDCKVLKQ
RPRFMPMKKQPSYIGSDGLELRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFL
NYMFNDHQLYGPFLLVVPLSTLTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVH
SKRMKFNILLTTYEILLKDKSFLGGVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLL
ITGTPLQNSLKELWSLLHFIMPEKFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKK
DVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCN
HCYLIKPPEDIDFLNKAEALQQLIRSSGKLVLLDKLLGRLKERGHRVLIFSQMVRMLDIL
AEYLRSRQFLFQRLDGSIKGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVV
IFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRM
DTTGKTVLHTGAAPSSSAPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAE
TRENDPGPSTVGEELLSQFKVANFSMMEEEEIDIDSERSQRSWDDIIPEEQRRRMEEEER
QKELEEIYLLPRMRNCAKQISFNSSEGRQSRIRRYSGSESDSPSDRKRPKKRGRPRTIPR
ENIKGFSDAEIRRFVKSYKKFGGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTL
RENPCGPEKISGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYM
IPCHSKAAHFDIEWGKEDDSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQA
KQLQTRADYLIKLLSKDLAKREAQKQAGAANSRKRKPRSKKNKSLKSTKTDDVMKSTSSE
PSSDKRSEEEDEDVEEEKVVTPVKTLTRRGRADRMVVVKNDDDDDDDDDDDDDDAEQEEV
SSSGEIEDKIKEIKKEDKKEKKEEGWDVKETKEAKEKKDTKPLEAVYKQEESMEKIDVKT
EVRERTKKASDVGVHITAGGENMSEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLS
EREQLEHTRQCLIKIGDHITECLQEYSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKH
AIKKRQESAQAMEQNTRNTNTHGYKHADIERLRDNSQQDESSRDSCSSERHQSSGRYHDS
KERHGSDSLRKPPADSRKRPYTSFSNGKDHRDRDHYRPDSRDRERDRERDRERDRDRYYN
DSKHRKLEEFRSSRDHRLEVKDHPLSDHRSSYRYNSDWQTEQRASASGPRSPRDQRSPYD
SRSPLGHRSPFDYSSDHKSTPEQIWSSRKS
NT seq
5493 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcaatgaagatgaaagtgtcagcaacagcagtggagaatcaagtaattct
gacgatgagtccggttctgcgtcgggatcagggtcggggtcggggtccggctccagctcc
agctcctcctccagcagcagccaatcaggcagcagcgactcaggtagtggttcagactcg
ggcagccaatcagattctgacactgagaaacccaaggagaagacggagcaaccaaataag
tcaaacatcgatggagccgagttctggaagtccaacccaagcatcctagcagtgcagaga
tctgctatgctcaggaaacaacagcttcagcagcagaaacagagacagagctcctcaaac
agtggatctgatgaggactcgtcgagtagtgatgactcgaactcgtcgagtgattccaaa
aggagaagaaattcaggctcctctgattctggatcaggttctgactcagggagcggctct
ggatcggactcgtcagcggaggacaacagtgatgaaacggtatcggactacgaacccagt
cacaaaatcaaaagcagaaagcctccaaccaagatgaattttcggaatggaaagaagagc
agcatccagaggaaaaaagcccagaagggttcatcctctgaggacgaggacgactgctac
aaaaaggtggcgtcggcggggccgcggcggcaggcgaccgtcaacatcagctacaaggag
gacgaggagctgaagacggactcagacgacctggtggaagttctcggtgaagacgtcccc
cagctcgaagaagacgagtttgaaacactggagagagtgatggacagcagaataggaagg
aagaaagcaacaggaagcgcgaccaccgtttacactgtcgaagcagacggggaccccaat
gccaacttcaatcccaacaaagaggcgggggagctccagtatttgatcaagtggaagaac
tgggctcatatccacaacacctgggagacagaggagacgctgaagttacagaacgttaaa
ggcatgaagaaactggacaacttcaagaagaaggaccaggagaaaaggaaatggttaaag
agcgcgtccccagaggatatagagtatttcaattgtcaggaagaattgatggacgacttg
cactcccagtatcagctggtggagcgaatcatcggtgagctatttacaacttatcgcatg
aaaaacacacaaacatggaccggtagaactaaacagaccttctgcacaggacattccaat
cagaagtcggccgctggttacccagactacctgtgcaagtggcaggggttaccctactcg
gagtgcagctgggaggacggagctctgatttccaagaagttccagaaatgcatcgatgac
tacatgagcagaaaccagtccaagacgattccatccaaagactgtaaggtgttgaagcag
agaccgaggttcatgcccatgaagaagcagccgtcatacatcgggagcgacgggctggag
ctccgggactaccagctggacagtttgaactggatggctcactcctggtgcaaaggcaac
agttgcatcctcgctgatgagatgggtttaggaaagaccatccagaccatctccttcctc
aactacatgtttaatgaccaccagctgtacgggcccttcctgctggtggtgccgctctcc
acgctcacctcctggcagagagagatccagctctgggccccgcagatgaacgtggtggtc
tacctgggagacatcagcagcaggaacatgattcggacacacgagtggatgcacgtccac
agcaagaggatgaagtttaacatcctcctaacaacatacgaaatcctcctcaaagacaag
tcgtttttgggcggggttaactgggcgttcatcggtgtggacgaggcgcaccgactgaag
aacgatgactctctcctctacaaaaccatgattgacttcaagtccaatcacaggctgctg
atcacaggaacgccgctgcagaactccctgaaagagctgtggtccctgctgcacttcatt
atgccagagaagttccactcttgggagctgtttgaggaggagcatggtaagggaagggac
tcgggctacactagtctgcacaaagagctggaaccttttcttctgcgcagagtcaagaag
gatgtggagaaatcacttcctgccaaagtggagcagatcctccgtgtggagatgagcgct
atacagaaacagtattacaaatggattctgaccaggaattacaaggctctgagtaaaggg
accaaaggcagcacgtctggtttcctgaacatcatgatggagctgaagaagtgctgtaac
cactgttacctgatcaaacccccagaggacatcgacttcctcaacaaagctgaagcccta
cagcaactgatccgcagcagtgggaagctggtcctgttggacaaactgttgggacgcctg
aaggagcgaggccacagagttctcatcttctcccagatggtacggatgctggatatcctg
gcggagtacctgaggagccggcagttcctcttccagagactagacggctccatcaaaggt
gagatgaggaagcaggcgctggaccattttaacgctgaaggctcagaggacttctgcttc
ctgttgtcgacacgcgcgggcggactggggatcaacctggcctccgccgatacggtcgtc
atctttgattcagattggaacccccaaaatgatctgcaggcccaggccagagcccacagg
atcggacagaagagacaggtgaacatctaccgtctggtgacgaagggctcggtggaggaa
gacatcatcgagagggcgaagaagaagatggtgctggaccacctggtgatccagaggatg
gacaccacagggaagacggtcctgcacacgggggccgcgccctccagttctgcaccgttc
aacaaggaggaactgtctgccatcctcaagtttggagctgaggagctttttaaagagcca
gagggtgaagagcaggagcctcaggaaatggatatcgatgagatcctcaagagagctgag
accagggagaacgaccccggaccctccacggtgggggaggagctgctctctcagttcaag
gtggccaacttctccatgatggaggaggaggaaatagacatcgattctgaacgcagtcag
cggagttgggacgatattattcccgaggagcagaggaggaggatggaagaggaggagagg
cagaaggagctagaagaaatctatctgctgccacgcatgaggaactgtgccaaacagatc
agttttaactccagcgagggccggcagagtcggatcaggaggtactctgggtcagagagc
gactccccctcggaccgaaagaggccaaagaaacgaggacggcctcggaccattccacga
gagaacatcaagggtttcagcgacgctgagatacggaggtttgtcaagagttacaaaaag
tttggaggacccctagaaaggttggatgctatcgctcgcgatgcggaacttgtggataag
tctgaacatgacctgaaacgtctggcggagacggttcacaacggctgcgtcagaacgcta
cgagaaaacccctgtggacccgagaagatatcgggaggcagaagagggaaagttaaaggc
ccgacattcaggatctctggagtccaagtcaacgccaagctggtcatctcacacgaggaa
gagttggctcctcttcacaaggccattcctgccgaccccgaggagaggaagaagtacatg
atcccgtgccactccaaagcagcccactttgacatcgagtgggggaaggaggacgactcc
agcctcctcattggaatctacgagtacggttacggaagctgggagatgatcaagatggac
ccagacctcaatctgacacacaagcttctaccagacgaccccgacaagaagccacaggcc
aaacagctacagaccagagcagactacctcatcaagttgttgagcaaggacctggccaaa
agagaagcacagaaacaagcaggggcagcaaattcacgcaaaaggaaaccaagaagtaag
aagaacaaaagtctgaagtccacgaagacggatgacgtgatgaagagcacgtcgtcagaa
ccctcgtcagacaagaggtcggaggaagaggatgaagacgtcgaggaggaaaaggtggtg
actccagtgaaaacgctgaccagacggggccgggcagaccggatggtggtcgtgaagaat
gacgacgacgacgacgatgatgacgacgatgacgatgatgatgcagagcaggaagaggtt
tcttcatctggagaaatagaagataaaatcaaagagatcaaaaaggaagacaaaaaggag
aagaaggaagaaggttgggacgtcaaggagacgaaggaggccaaagagaagaaagacacc
aagcccctggaggcagtgtataaacaggaagagagcatggagaagatcgatgtgaagacg
gaggtccgggagcgaacgaagaaagcttctgacgttggcgtccacatcacagccggtggg
gagaacatgtctgaggagtcagaggagctggaccagaggaccttcagcgtgtgtaaggag
aggatgcggccggtgaaggcggcgctgaagcagctggaccgaccggagaagggcctgtcg
gagcgcgagcagctggaacacacccggcagtgtctcatcaagatcggagaccacatcacc
gagtgtctgcaggagtactccaaccccgaccagatcaagcagtggaggaaaaacctgtgg
atattcgtctccaagttcaccgagtttgatgccaggaagctgcataagttatacaagcat
gcaatcaagaaaagacaggagagcgctcaggcgatggagcagaacactagaaacacgaac
acccacggctacaaacatgcagatatcgagaggctgagggacaactctcagcaggacgag
agcagcagggacagctgcagctcggagcgccaccagtcctcagggcgataccacgacagt
aaggagaggcacggctcagactccctcagaaaaccccccgcagactccaggaaaagaccc
tacacctccttcagcaacggcaaagaccaccgagacagagaccactacagaccggacagc
agggacagagagagagacagagagagagacagagagagagacagagacaggtactacaac
gacagtaagcacaggaagctggaggagttccgctccagcagagaccaccgtctggaggtg
aaggaccaccccctgtcggaccaccgttcttcctaccgctacaactcggactggcagacg
gagcagcgagcttcggccagcgggccccgctccccccgagaccagcgctcgccctacgac
tcccgctcgcccctgggacaccgctcgcccttcgactactcgtcggaccacaagagcaca
ccggagcaaatctggagcagccgaaagtcgtaa
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integrated database retrieval system
