Antennarius striatus (striated frogfish): 137608765
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Entry
137608765 CDS
T10427
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
astr Antennarius striatus (striated frogfish)
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137608765 (ddx20)
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137608765 (ddx20)
Spliceosome [BR:
astr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
137608765 (ddx20)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Iwr1
AAA_30
CMS1
Motif
Other DBs
NCBI-GeneID:
137608765
NCBI-ProteinID:
XP_068191437
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Position
2:complement(27543084..27548932)
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AA seq
780 aa
AA seq
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MAASVKKAAHDITTRSRTDDVLLSDGIEFSSLLLSQAVLDGLSAAGFHKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTVALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKAHLKKCHLAVGSPGRIKQLIELGMLSTASIRLFVLDEADK
LLEEGSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMREPTFVRLNPGDMGLKG
LKQYYKLVQSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQEQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYLH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCNLSLSLLPSVIEPGLMDEPCDWDVCT
DAAHVGHLPQLSVKTERKKSRAKTIRDQTPEHGRPNNPVKIREQHAEKTPRNVSPVKTSR
SQSPPQPAPTRKELQEALPKIPPLSSFKTCSSRFVSFEEAERDFQSFITTGLGRTVEVIR
EFGGPEDNALHEESSGHKESVMLYDDAAQSLIRRGKRWQSDLTRARFTSGASSSQSDKDD
GESKGVRNPQKEVKQESIESNPEEEITKSKCWVSSTPEIYPQTTNASNSRASSQPVSDQS
APVVKSSRQHNQIAPAQSSRHKSRKIKEETGKGHKKISEKKQRDKRARERDEEEHDEEEP
NDEEDWDAESYWRASYRAWSDYYAFLSPQERGVRSYYSVAQNWMAAYRMNAVYMEELLKS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttccgtgaagaaagctgcccatgatataacgacgcggagtcgaactgatgac
gttcttttgtcggatgggatcgaattcagctctctcctcctgtcgcaggccgtcctggac
ggactgtccgccgcgggcttccacaaaccctccccgatccagctcaaggcgatcccgctg
ggccgctgcgggctggatttgattgtgcaggcaaaatctggcacagggaagacatgcgtg
ttctgcaccgtcgccctggactcgctggttctggagaatcctgcaactcaggtcctcgtc
ctggctcctacgcgtgagatagcggtgcaaatccactcagtagtcatggctataggctgt
gccatggaaggtcttgagtgccatgttttcatcgggggcaggcctgtcagtcaggataaa
gctcatctgaagaagtgtcacctagctgtcggttcacctggtcgtatcaagcagctcatt
gagctgggcatgctgtccacagccagcatcagactgtttgttctggatgaggcagacaag
ctgctggaggagggcagcttccaggaacagatcaactggatcttttcctctctgcctgtg
aacaaacaaatgctcgcactctccgccacatacccagaatcccttgctcagcaccttacc
cgctacatgagagagcctacgtttgtgaggctcaatcctggtgacatgggcctgaaaggt
ctgaagcagtattacaagctggtgcagtcccatcctttacctcacaaagtattcgaggag
aaagtgcagcacttgctggagcttttcagtaaaatcccattcaaccaggccctggtgttc
tccaacctacacacaagagctcagcatctggcagacatcctgtcctctaaaggcttacct
gctgtttgcatctcaggtggtctgagtcaggaacaaagactggaggcgatgtcaaaactg
aagcagtaccagtgcagggtcctcatctccactgacctgacgtccagaggtattgacgca
gacaaagtaaacctggtgataaacttggatgtgccgcaggactgggagacatatttgcat
cggattggacgggccggtcgctttggcactcagggactggcggtgacttactgctgccat
ggtgaggaggagaacaagatgatggccatcgctcaaaagtgcaaccttagtttgtcctta
ttgccctccgtcatagaaccggggttgatggatgaaccatgtgactgggatgtctgcaca
gatgcagcccatgtgggccacttaccccagctctccgtcaagacggagaggaagaagagc
cgtgccaagacaatcagggatcaaactccagagcacggccgtccaaataacccagtgaag
atcagggaacaacacgctgagaaaactcctaggaatgtatctcccgttaagacatctcgc
tcgcagagtcctccccagccggcgccgactcgtaaagagctgcaggaggctctaccaaag
atccctcctctcagctcgttcaagacgtgtagttccaggtttgtgagctttgaggaggcg
gagcgtgacttccagagctttattaccacagggttggggagaacagtggaggtcatcagg
gagtttggaggaccggaggacaacgccctccatgaggagagcagtggacataaagagtca
gtgatgctttatgatgatgcagctcaaagcttaatccggcggggaaaacggtggcaatct
gatttaacacgtgcaaggttcacatctggggcttcaagctcgcagtctgacaaggacgat
ggtgaaagcaaaggagtcaggaatcctcagaaagaggttaaacaagaatccattgagtcc
aatccagaggaagagatcaccaaatccaaatgttgggtttcatccacacctgaaatatat
ccccagacaacaaatgcatcaaacagtagagcttcatctcagcctgtgagcgatcaatct
gcgccggttgttaaatcgagcaggcaacacaatcagattgctccggcgcagagcagcaga
cacaaatcaagaaagattaaggaagagactggaaaagggcataaaaagatttctgaaaag
aagcaaagagacaaaagagccagggagagggatgaagaagagcatgatgaagaagaacct
aatgatgaagaggactgggatgctgaatcctactggagagccagctacagagcctggagt
gattactacgccttcttgtctcctcaagagcgaggtgtccggagctactatagcgtagcc
caaaactggatggcagcttatcgaatgaatgccgtctacatggaggaactcctgaagtcc
tga
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