Antennarius striatus (striated frogfish): 137609313
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Entry
137609313 CDS
T10427
Symbol
ddx42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137609313 (ddx42)
Spliceosome [BR:
astr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137609313 (ddx42)
Complex B
137609313 (ddx42)
Complex C
U2 SnRNP specific factors
137609313 (ddx42)
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Other DBs
NCBI-GeneID:
137609313
NCBI-ProteinID:
XP_068192377
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Position
16:3107478..3114162
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AA seq
908 aa
AA seq
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MNWNKGGPGVKRGFGFGGFSLAGKKEEPQLPSRAHTTFGATGSSGGYGKNQQLPSFYKIG
TKRANFDEENAYFEDDEEESSSNVDLPYIPAENSPTRQQVQSGGGSDSEDDPLDAFMAEV
EDQAAKDMKKLEEKEKEKKAAKGIRDDIEEEDEQEAYFRYMAENPTAGLTQDDEEEDIDY
DSDGNPIASTTKKIILPLPPIDHSEIDYPPFEKNFYNEHEELSSLNGTQVLELRHKLNLR
VSGAAPPKPCTSFAHFSFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSG
KTAAFIWPMLVHIMDQKELEAGEGPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYG
GGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVSYLVFDEADRMFDMGFEYQVR
SIASHVRPDRQTLLFSATFRKKIERLARDILVDPIRVVQGDIGEANEDVTQVVELLHTGA
DKWNWLTRRLVEFSSSGSVLIFVTKKANCEELATNLTQEGYSLGVLHGDMDQSERNKVIT
DFKKKNTPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLL
TSKDTTFAGDLVRNLEGANQGVSKELMDLAMQNPWFRKSRFKGGKGKRLNIGGGGLGYKE
RPGLGAESSDRSSSSLFSSSSFEGYSKPTTGALGDRMSAMKQAFQAQYKSHFVAASSGPP
KLSAKASSTSGWTSAGSLSSVPTESPNSVERSQSIHMSIPGFTSAGSLSSVVPSQTNPQL
SYPPPAPPPQRDGSRDRHGEDRGRHGDGHHRHSDRSERSDRHGGEDRYGDRDRHGDRDRE
RDRDRDRHSSSSSRHSDSRNGDGSRRDREDRRSERDGGDRGSGEGRDRGDDSFAVPEPPK
RRKSRWDN
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaacaaaggtggcccgggtgtgaagcgagggtttgggtttggaggattttct
cttgcagggaaaaaagaagagcctcaactcccctcgagggctcacacaacatttggagcg
acaggatcaagtgggggatatggaaagaaccagcagcttccatcgttctacaaaatcgga
acaaaaagagctaattttgatgaggaaaatgcgtactttgaagatgatgaagaggagtcc
agcagcaacgtggatctgccatacatcccagctgaaaactctcccacacggcagcaggtg
cagtctggtggcggttcggacagcgaagatgacccactggatgccttcatggcagaagtt
gaagaccaagcagccaaagacatgaagaaactagaagaaaaggaaaaggagaaaaaggct
gcaaagggtattcgtgatgacattgaagaagaggatgaacaagaagcctacttccgctac
atggcagagaatcccacagccgggctgacccaggacgatgaagaggaggacattgactat
gacagtgatgggaacccgatcgcctctaccactaagaaaataatcttgccgcttcctccc
atcgatcattctgagatcgattatccaccctttgagaagaacttctacaacgagcacgaa
gagctcagcagcctgaatggaacccaagtgttggagttgagacataaattgaacttacgg
gtatctggcgccgcccctccaaaaccctgcactagtttcgctcacttcagcttcgatgaa
cagctcatgcaccaaatccgcaagtcggagtacactcagcccacaccgattcagtgccag
ggtgtgcccatagctctgtctggacgtgacatgattggcatcgcaaaaaccggtagtggt
aaaactgcagcttttatctggcccatgctggttcacatcatggatcagaaggagctagag
gctggagaagggcccattgccgtcatcgtgtgtcccaccagggagctttgtcagcagatt
catgccgagtgtaagcgctttgggaaagcctactcgttgcgttctgtggccgtgtatgga
ggaggcagcatgtgggagcaggctaaagctttgcaggagggagctgagatcgtggtgtgc
acgccgggtcgactgatcgaccacgttaaaaagaaggcgacctccctgcagagagtgtcc
tacctggtgttcgatgaggctgaccgcatgtttgacatgggcttcgaatatcaggttcga
tctatcgccagccacgttcgcccggacagacagacccttctgttcagcgctactttccga
aagaagattgagaggctggcgagggacatcttggtggatcctattcgtgtggtgcagggc
gacatcggagaggccaacgaggatgtgacccaggtggtggagctgcttcacaccggggcg
gataagtggaactggctgacccgccggctggtggagttcagctcctccggctcggtcctc
atcttcgtcaccaagaaggcaaactgtgaggagctggcgaccaacctgacccaagagggc
tacagcctgggcgtcctgcacggagacatggaccagagcgagaggaacaaagtcatcacc
gacttcaagaagaagaacacgccggtcctggtggccactgatgttgccgctcgcggtctg
gacatcccatccattcggacggtggtgaactacgacgtcgcgcgggacatcgacacccac
acgcacaggattggtcgaacaggtcgcgccggcgagaagggcgtggcttacacgctcctc
accagcaaagacaccacattcgccggcgacctcgtcagaaatctggagggagcgaatcag
ggcgtttccaaggagctgatggatttagcaatgcagaatccctggttcagaaagtccaga
ttcaagggcggtaaggggaagaggctgaatattggcggaggtggtcttggttataaagag
agaccgggcctgggggctgaaagctctgatcgcagcagcagcagtttgttttcttccagt
agctttgaaggatacagcaaaccaaccaccggcgctctgggagatcgcatgtctgcgatg
aaacaagcattccaggctcagtataagagtcactttgtggctgcgtccagcggtcctcca
aagctcagcgctaaggccagcagcacgtcgggctggacgagcgccggcagcctgagctcc
gtgccgacggagtcgcccaacagcgtggagcggtcgcagagcatccacatgtccataccc
ggcttcaccagcgctggctccttgagctcagtggtcccaagtcagaccaacccccagctc
agctaccccccaccggcccctcccccgcagagagacggatcgagggacagacacggggaa
gaccgcgggcgccacggagacggccaccatcgccacagcgacaggagtgaaagaagcgac
agacacggcggagaggaccgctacggagaccgggatcgccatggagaccgggatcgtgaa
cgtgaccgcgaccgggatcgccacagcagcagcagcagccgccacagcgacagtcgcaac
ggagacgggagcaggcgggacagagaagatcgcaggagcgagagggacgggggtgacagg
gggagtggggaggggagggacagaggagacgatagcttcgctgttcccgaacctcccaaa
cgtagaaagagcaggtgggacaactaa
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