Antennarius striatus (striated frogfish): 137609348
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Entry
137609348 CDS
T10427
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04120
Ubiquitin mediated proteolysis
astr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137609348 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137609348 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
astr04121
]
137609348 (mgrn1b)
Enzymes [BR:
astr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137609348 (mgrn1b)
Ubiquitin system [BR:
astr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137609348 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
137609348
NCBI-ProteinID:
XP_068192428
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All DBs
Position
16:5579693..5587224
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AA seq
551 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDPLVEDGAKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKTPSLASETVHYKRGVSQQFSMPAFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGGDGRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSSSPAPTDATATEDVAESLSPDDDPE
DRMHSGGDILHDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLSPSS
SLHMEDEHLNP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggggtctatcctcagccgcagaatcgctggtgttgaagatatcgacatccaggctaac
tctgcgtatcgatttccacctaaatctgggaattattttgcgagccacttcttcatggga
ggagagaaatttgacacaccgcaccccgaggggtacctttttggggaaaacatggacctg
aattttcttggaaataggccagtgcagtttccgtatgtgacgcctgcaccccatgagcct
gtcaaaaccttgaggagtctagttaacatcagaaaggactctcttcgtttggtcaggtat
aaagatgactctgacccgctggtggaggatggtgcaaagccaaaggttcaatacggtgtg
gagttcacctttgatgctgatgcacgagtggccatcaccctctactgccaagcttttgaa
gagttctccaatgggatggcagtgtacagcccaaagactccgtcgctggcctctgaaact
gttcattacaagcgtggggtgagccagcagttctccatgccagctttcaaaatagatttc
agcgagtggaaagaggaagacctcaactttgaccttgaccgaggagtgtttcccatggtg
attcaggctgtggttgatgaaggggatgattgccttggacatgctcacgtacttctggca
gcctttgagagacatgtcgatggcagtttctccgtcaaacctctgaagcagaaacagatt
gtggaccgtgtgagctacctcctacaggagatctacgggattgagaacaaaaacaaccaa
gaaaccaagccatcggatgatgaaaacagcgacaacagcaatgagtgtgttgtgtgtctg
tctgacctgcgagatacactcatcctaccttgcaggcatctgtgtctctgcaactcctgt
gcagacactctgcgttaccaggctaacaactgtccaatctgcaggctgcccttcagagcg
ttgctgcagatcagagctgtcagaaaaaagcccggtgcactttccccagtgtccttcagc
ccagttttggctcagactatggaccatgacgaacactcgagcacagactcagttcctcct
ggctttgaacccatctcactgttggaggcactgaatggacttcgctcagtgtctcctgcc
atcccatcagctccactctatgatgaaatcaacttctctggtggtctgggaggcgacggc
cgacagctgagttcccctgagcatttaagtgatggaagtctgcagaaaggcaaagtcagc
aaatctcctgacagcaccctcagatctccttcctctcctatccaagaggaagatgaggag
aagctttctgagatgtctgatgcccaaccacacaccatgctgtccagcagcccagccccc
acagacgccacagcaacagaggatgtggccgaatccctgtccccggatgatgacccagag
gacaggatgcattctgggggagacattctgcacgactgcagcagtgaacacagcagcttg
accaaaacagaaagtgaccccccaggggatttgtctctaccaggttcttcagagtcgaca
gaaagcctgaaaagtcagagcacaaactgctccagccagcctctcctgtctccctcaagc
agccttcacatggaggatgaacacctcaacccctga
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