Antennarius striatus (striated frogfish): 137610198
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Entry
137610198 CDS
T10427
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137610198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
astr03041
]
137610198
03009 Ribosome biogenesis [BR:
astr03009
]
137610198
Enzymes [BR:
astr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137610198
Spliceosome [BR:
astr03041
]
Complex A
U1 snRNP components
U1 related factors
137610198
Complex B
137610198
Ribosome biogenesis [BR:
astr03009
]
Eukaryotic type
Pre-60S particles
Helicases
137610198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
137610198
NCBI-ProteinID:
XP_068193783
LinkDB
All DBs
Position
16:6654184..6659257
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AA seq
616 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGPPRFGGNRGGGGGGGKFGNPGERLRKKHWNLDELPKFEKN
FYQQHPDVARRSMQEVEQYRRSKTITFKGRECPNPIMKFEEASFPSYVMDVINKQNWTDP
TPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINYD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLISVLREANQAINPKLLQMAED
RGGRSRGGRGGDYRDGRRDRYSSGRRDFGGFRDRDNGRGFDGGQNKTFGTNSQNGSYGVS
NGTSNGYNGNGYNGNGQSNFNSQTGAFGNQNSFQTPQFAPSKAGAQTGASFAFPQTQAAQ
QHPPPLVPYTMPQFSQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagaccgcggcagagacagagatagaggctatggcggtggt
cccccacggttcggtggaaaccgcggcggaggtggtggaggaggaaagttcggcaatccc
ggtgagagattacggaagaaacactggaatttggacgagctcccaaagtttgaaaagaac
ttctatcaacagcatcccgacgttgcccgtagatctatgcaagaggttgaacaatacaga
agatccaaaaccataacgtttaaggggagagaatgcccaaatcctattatgaagtttgaa
gaggccagcttcccatcttatgtgatggatgtgatcaacaaacagaactggactgatcca
acacccatccaggctcagggctggcctctggccctcagtggcaaggacatggttggcatt
gcccagactggctctggcaaaacactttcttatttgctccctgctattgtgcatataaac
caccagcctttcctggagcgtggtgatggtcccatttgcctggtacttgccccgacccgt
gagctggcacagcaggtgcaacaggtggctgctgagtacggcagagcttctcgcctcaaa
tctacctgtatctatggaggagcacccaaagggcctcagatccgtgacttggaaagaggt
gtggagatctgcattgcgactccaggaaggcttatcgacttcctcgaggcaggaaagaca
aaccttcgcagatgcacttatctggtgctggatgaggctgacaggatgttggacatgggt
tttgagccacagattcgcaagattgtggaccaaatcagacctgaccgtcagactctgatg
tggagcgccacgtggcccaaagaggtccgtcagctggcggaggacttcctaaaggagtac
gtccagatcaatattggagcgttgcagctcagtgccaaccacaacattctgcagattgtg
gatgtctgtaatgatggagagaaagagaacaaactaattcgtttgcttgaggaaatcatg
agtgagaaagagaataagaccatcatctttgtagaaacaaagaggcgctgtgatgacctc
accaggaggatgaggagggatggatggccagctatgggaatccatggagataaaagccag
caggaaagagactgggttctcaatgagttcaaatatggaaaggctccaattctcattgcc
acagatgttgcctccaggggtctagatgttgaagacgtcaaatttgtcatcaactatgac
taccccaacaactcagaggactatattcaccgcattggcagaacggctcgtagccaaaag
acaggcacagcttataccttcttcacccccaacaacatgaggcaggccagtgacctcatc
tctgtccttcgcgaggccaaccaggcgatcaaccccaagctcctccaaatggcggaagac
agaggaggtcgttcaaggggaggtcgaggtggtgactaccgggacggccgtagagataga
tattcctctggcaggcgtgatttcggtggttttagagacagggataacggtagagggttt
gacggtggccagaacaagacttttggcacaaattcacagaatggaagctacggggtcagt
aacggcaccagtaacggctacaatggaaatggctacaacggtaacggacagtccaacttc
aacagccaaacgggagcattcggcaaccagaacagcttccagaccccccagtttgctccc
agtaaggctggagcgcagacgggagcgagcttcgctttcccccagacacaggctgcacag
cagcatcctccgccactggtgccctacaccatgcctcagttctctcagtaa
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