Antennarius striatus (striated frogfish): 137611317
Help
Entry
137611317 CDS
T10427
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04140
Autophagy - animal
astr04142
Lysosome biogenesis
astr04148
Efferocytosis
astr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
137611317 (vps39)
04140 Autophagy - animal
137611317 (vps39)
04148 Efferocytosis
137611317 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137611317 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
astr04131
]
137611317 (vps39)
Membrane trafficking [BR:
astr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
137611317 (vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
137611317
NCBI-ProteinID:
XP_068195546
LinkDB
All DBs
Position
17:16988242..17003139
Genome browser
AA seq
876 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVLSKAKGATLFACDLLQTSTGE
ERLRMCVAVKKKLQLYYWKDREFHELQGDFGAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRVVEIRTFEPRLLVQSVELQRPRFITSAGPNVVYVASNHFVWRLVPVSI
SSQIRQLLQDKQFELALQLAKMKDDSDGDKKQQIHHIQNLFAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPPDYRKQLHYPNPLPSLSGAELEKAHLALIDYLTQKRNHLVKQL
NDSDPSSTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENMG
MIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRHKVLNFLREGFKELAIPYLEHIVNIWE
DSDPEFHNVLIQLYLERVQGLMKQYLNSLPEGVPAVAAGKEEGDLGEFRNKLLSFLDSST
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTHMAEEYCHRHYNSLVD
GNKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALHVLEVHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEENAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNVCPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcgtatgaaccagtgcctattttagaaaaacttcctcttcagattgactgc
ctggcggcatgggaggactggctgcttgtgggaaccaagccaggacatcttctcctctac
cgaataaagaaagatgcaggtaccaaccggtttgaggtgacactggaaaaatccaataag
aacttctcaaagaagattcagcagctttatgttgtctcgcagtacaaaatcctcgtcagt
cttcttgagaacaatatccacgtccacgacctccttaccttccagcagatcactgtgtta
tccaaagctaaaggagcaacactctttgcctgtgacttactgcaaaccagcacaggagag
gaaagattgagaatgtgtgttgcagtgaaaaagaaactgcagctttattattggaaggat
cgagagttccatgaactgcagggggactttggcgctcccgatattccaaaatccatggct
tggtgtgaaaactccatctgtgttggttttaaacgagactattaccttattcggatggat
ggccgtggctccatcaaggagcttttccccactgggaaacagttggagcctctggttgcc
ccactggctgatgggaaggtggctgtcggtcaggatgacctgactgtagtgttaaacgag
gagggtgtttgcacccagaagtgtgccctgaactggacggacatccctatagcaatggag
caccagcctccctacatcatagccgtcctcccccgggtcgtagagatccgcacctttgag
cccagactcctggtgcagagcgtggagctgcaaagacctcggttcatcacttcagctggg
ccaaacgttgtttatgttgccagcaaccactttgtgtggcgcctggtgcccgtgtcgata
tccagccagatccggcagcttcttcaggacaagcagtttgagctggctcttcagctggcg
aagatgaaggatgattcagatggtgataagaagcagcagatacaccacatccagaatctc
tttgccttcaacctcttttgccaaaaaagatttgatgactccatgcaggtgtttgccaaa
cttggcacagaccccacccacgtgatcggcctgtatcccgacttgctcccacccgactac
cgcaaacagttgcactatcccaaccctctgccctcgctgtccggggcggagctggagaag
gcccacctggctctcattgattacctcacccagaaacgcaaccatctggtcaagcagctg
aacgactcggacccgtcttcgacgtctccgctcatggagggaactcctaccatcaaaagc
cgcaagaaactgctgcagatcatcgacaccaccctgctgaaatgttacctgcataccaac
gtggctctggtgtcccccctcctccgcctggaaaacaaccactgccacattgaggagagc
gagtacgtcctgaagaaggcccacaagtacagcgagctcatcatcctctatgagaagaag
ggtctgcatcagaaggccctgcaggtgctgctggatcagtccaccaaagccaactctccg
ctgaagggccacgagcgaacagtgcagtacctccaacgactgggggtggagaatatggga
atgatctttgagttttctccgtgggtgttaaagatctgccctgaggatggcctgaagatc
tttacagaggatctgacagaagtggagacgttgccccgacacaaggtgctcaacttcctg
agggaaggctttaaggaactcgccatcccatatttggagcacatcgttaacatttgggaa
gacagtgacccggaatttcacaacgtgttgatccagctgtacctggagagagttcagggc
ctcatgaagcagtacctcaactcactgccggaaggagttccagctgtcgccgccgggaag
gaggagggagatctgggcgagttcaggaacaagctgctgtctttcctggattcctccacc
agctacgaaccagccaggctcatcagtgacttcccgtttgacggcctcctggaggagcga
gcgctgcttctgggacggatgggtaaacacgagcaggcgctcttcatctatgttcacatc
ctgaaggacacccacatggctgaagaatactgtcaccgacattacaacagtttagtcgat
gggaacaaagacgtgtatttgtctttgctgcggatgtacctgtcccctcctgacgtccac
tgtcttgggcccatcaagatggagctgtcggagcctcaggccaacctgcaggcggccctg
cacgtcctggaggttcaccacagcaaactcaacaccaccaaggccatcaatctcctccca
gccaacactcagatccgagagatccgcgtcttcctggaaagcgtcctggaggagaacgcc
cagaggaaacgctgcaaccaggtgctgaagagtctgctacaggccgagttcctgcgggtg
caggaggagcggatcttccaccagcaggttaaatgtgtcatcacggaggagaagacctgc
agagtgtgtaagaagaaaatagggaacagtgcgtttgccaggtatcccaacggcgtggtg
gtgcattacttctgctgcaaagaccgtaacgtgtgtcctacggagcagtaa
DBGET
integrated database retrieval system
