Antennarius striatus (striated frogfish): 137612440
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Entry
137612440 CDS
T10427
Symbol
tnn
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr04510
Focal adhesion
astr04512
ECM-receptor interaction
astr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137612440 (tnn)
04518 Integrin signaling
137612440 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137612440 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
astr00536
]
137612440 (tnn)
Glycosaminoglycan binding proteins [BR:
astr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137612440 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Teneurin
EGF_TEN
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_4th
EGF_Tenascin
Fn3_Dep-1_2nd
EGF_2
DUF4249
DUF7949
GH101_dom-5
EGF
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
137612440
NCBI-ProteinID:
XP_068197073
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All DBs
Position
18:complement(6718159..6763029)
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AA seq
1111 aa
AA seq
DB search
MSIKEADISFDWGKDEDEELQKVKINNFSNSAENHPNPSVPEQGVTFGHVYQIDLPGSSI
CNLEPVQTQDDTGLQTGTVPNGEDNIIFRHNIRLRTPKCECEESESFKSLLYRVNGLEEE
VNYLKTQCTQGCCGGDGAAGMDTSCSGHGTYQHNTCSCLCNPGWEGADCSDSTCPDECSD
NGRCVNGKCVCYQGYKGDSCSQVMCPDNCNDKGHCIDGKCECFSHFTGDDCSIQKCLNDC
IGNGQCVDGQCICDEGFYGEDCSLVFGPQGLRLVHFTDVSLLVEWDPVHGAEYYILAYHP
KDKENILQQIQVPNTENSYLISRLSPGVTYIVQVCAVIKELQSEADKIAATTDLSTIDNV
RVLGQTEVSVQLDWSNPAAEVDHFRLTYTDPEGHQEVLDIEKSQEARIQHTIMGLFPGTE
YKISVQAVKETSEGKSVFVTGATDIDMPNNLITTEVTEDTAKVSWDPVQARIDGYMLRYI
SADGTSADIAIGRDSTSYRLVGLRPGILHTIYIWAYKGDKVSRKTSTQAETEMDAPTNIS
VQDESESSLSVSWDHAQAEIDGYVLTYSSSEGSSEEIPVGSDRSSYILVGLKPGVLYTIH
IWATKETKVSRKISTQAETELDAPANLSAQDVTESSFSLSWDPVHAEINGYVLAYSSSDG
FSEKIPLGPDRTSYMLTSLRPGRPYTVYIWAIKGDKASKKILTNAETELNNPANLLVQDE
TESSFSLSWDQVQADIDGKILAHCSSMSSDVEIPVGSDSTSNKLTSLSPGVLYTFSYKPT
EIDAPADLKATDVMQNSAVLTWIPPLADIEGYIITYRDEDGNMETVENQLDTSERSFSLS
GLNTGKRYIVTIMAYRGQKRSKVTQTIFKTVGLLYPFPMDCLQIMKNGNKKSGVYTIYIN
NDLSRPIEVYCDMDTDGGGWLVLQRRTVGKLDFLKRWRQYIAGFGNMTEEFWIGLEKIYE
LTNTPTQYELRFDLGLGLERVYAVYDDFKIAPIKQKFKLTIGKYSGTAGDAMTYHQGRPW
TTIDSDNDIALSNCALTHRGAWWYKNCHLANLNGNWGDSRHSMGVNWKPWKGHLTSLDFT
EMKIRPVGTLSSKKRRSLMTRKSRTINVQEK
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaggaagctgacatctcatttgactgggggaaagatgaggacgaggagctg
cagaaggttaagatcaacaacttttccaactccgccgagaaccatccaaacccctcggtg
cctgaacagggggtcacatttggtcatgtctatcaaattgaccttcctgggagttccatt
tgtaatcttgagccggtacaaacccaggatgacacaggattacaaacaggaaccgttcca
aatggagaggacaacatcatcttcagacacaatatcaggttgcggacaccaaagtgtgag
tgtgaggagtcagaaagcttcaagtcactcttgtacagagtcaatgggctggaagaggaa
gttaactacctgaagacacagtgcactcaaggatgttgtggaggagatggtgctgcagga
atggacacaagttgtagcggccatggtacctaccaacacaacacgtgcagctgtctctgt
aacccgggatgggaaggcgcagattgctccgactccacctgccctgatgagtgcagtgac
aatggccgatgtgtgaatgggaagtgtgtatgttatcagggctacaaaggagacagctgc
agccaggtgatgtgtccggacaactgcaatgataaaggccactgcattgatggaaaatgt
gagtgcttctctcacttcactggtgatgactgcagcatccagaagtgtctcaatgactgc
attggtaacggccagtgtgtggatggccagtgcatctgcgatgaaggcttttatggggaa
gactgttcattagtttttggccctcagggcctgcgtttggtccacttcactgacgtctcc
ctcctggttgagtgggatccagttcatggggcagagtattatattttggcatatcatcca
aaagataaggagaatatcctgcaacaaattcaagtccccaatacagagaactcctacctc
atatctagactgtcccctggggtcacctacattgtccaagtgtgtgctgtcatcaaagag
ctccaaagtgaggcagacaagattgcagccaccacagatctaagcactattgataatgtc
agagttcttggccagacagaagtctctgtccagttggactggagcaacccagcagccgaa
gtggatcacttcaggctcacatacactgacccagaaggacaccaagaagtgctggacata
gagaagagccaggaggcacgcatccaacacacaataatgggtctgtttccaggaacagag
tacaagatctcagttcaagctgtcaaagaaacctcagagggaaaatctgtctttgttact
ggtgcaacagacattgacatgcctaataacctaatcaccactgaggtaacagaagacaca
gcaaaagtttcatgggatccagtccaggcaagaatagacggctacatgttgaggtacatc
tctgcagatggcaccagcgcagacatagccattggacgggatagtacctcatataggctt
gtaggtttgaggcctggcattcttcacaccatctacatctgggcctacaagggagacaaa
gtcagcagaaagacttctacacaagccgaaacagaaatggatgctcctactaacatctcg
gtccaagatgaatcagagtccagcctcagtgtatcctgggatcatgcacaggcagaaatt
gatggctatgtcttgacctatagctcctctgagggctcaagtgaggaaatcccagttggg
tcagacagatcttcatatatactagttggcctaaagcctggagtcctctacactatccac
atctgggccaccaaggagaccaaagtcagcagaaaaatctcaacacaagcagagacagaa
ttggatgcacctgctaacctctcagctcaggatgtgaccgaatccagcttcagcctatca
tgggatccagtccacgctgaaataaatggttacgtcctagcctacagctcatctgacggc
tttagtgagaagattccattagggcctgacaggacctcctacatgttgactagtttgagg
cccgggcgtccctacactgtctacatctgggccatcaaaggggacaaagccagcaagaag
atcttgacaaatgctgagacagaactgaataaccctgctaacctcttagtccaagatgaa
acagagtccagcttcagcctgtcatgggatcaagtccaggcagatattgatggcaaaatc
cttgcccactgctcctctatgagctcagatgtggaaatcccagttggttctgacagcacc
tccaacaagttgactagcctgagccctggggtcctctatacattctcatataaacccaca
gagattgatgcccctgcagacttgaaggcgacagacgtaatgcagaactctgctgttttg
acatggattcctcctctggctgacattgagggatacattatcacctacagagatgaagat
ggcaatatggagacagttgaaaatcagcttgacactagtgagagaagcttttcattgtca
ggcctgaacactgggaagagatacattgtcaccatcatggcctacagaggacaaaagagg
agcaaggtgacccagaccatcttcaaaacagttggtctcctgtacccctttccaatggac
tgtcttcagatcatgaaaaatggcaataagaagagtggtgtctacaccatctatattaac
aatgacctttccagacctattgaggtttactgcgacatggacactgatggagggggctgg
ctggtactccaacgacgtaccgttggcaagctggattttctaaaacgctggagacagtac
atagcgggttttggcaacatgacagaggagttctggatcggtctggaaaagatatatgag
ctcaccaacacacctactcagtatgagctgcggtttgacttgggcctgggcttggagcga
gtttatgctgtatatgatgactttaagattgcacctatcaagcagaagttcaaactcacc
ataggcaaatacagcggaacagcaggtgatgctatgacctaccaccaaggccgcccctgg
actaccattgattcagataatgacatcgccctcagtaactgtgccctgacccaccgtggt
gcatggtggtacaaaaactgccatctggccaacctcaatggcaactggggtgacagtagg
cacagtatgggagtgaactggaaaccatggaagggccacctgacatccctcgatttcact
gagatgaagatccgacccgtgggaaccttgtccagcaagaagagacggtcattgatgacc
cggaaaagcagaaccataaacgtacaggagaaatga
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