Antennarius striatus (striated frogfish): 137612607
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Entry
137612607 CDS
T10427
Symbol
wdr33
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137612607 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
astr03019
]
137612607 (wdr33)
Messenger RNA biogenesis [BR:
astr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137612607 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ASA1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_WDR41
PEP5_VPS11_N
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
137612607
NCBI-ProteinID:
XP_068197323
LinkDB
All DBs
Position
18:2030296..2042516
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AA seq
1131 aa
AA seq
DB search
MATDVGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRHLENRLWQRDHRDFRAVQPDAGCYNDLVPPLGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKSLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVDLNNMASIPGMGIPEQLKAAMEQEQSSKEAAPDVEMSIPGLDWGMDE
VMGKDTKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPGADLSKDRKVEQKVDMKKKTQA
EIEQEMAALQYTNPMLLEQMKMDRMNQMNADGNLGPQQGPGPMSSFSGAGGPGLPGQQGF
PQNMPPQQMSNNMGPPMGPGGMQPPFMAPGQMGPPSGPQSHQGPPQDMMGPPDMQGQQGM
QRHPGPPRNMGPQGPHRGMQGPPSGMMGPPSRGMGPREPQGPPAQGGMMSSQGNMMGPQG
GMMGPPSRTHGNMPNNYGMGNMHGPPGSMQGPPGNVQGPHGNMQGPPGNMQGPHGNMQGP
HGNVQGSQGNMQGPPYGQHHGQNSGPMMHGMGQQGPNSKGDPRGPLPNHHLGPPERQTPG
GPESGSGPYWGDNQQGRRGPQDFDSARDYHVREEGWRPGYPGGGGGGGGGGGGGGGGGNW
GPDERFGGDFRGRREERXELDAMWGGRGGQNRIWLIXTGPDGCCRFRGGPGRPGARSYPD
DYGGQEEGFDSPEEMSRGWDNGARARPPRGAGGPPRGGXAEPEPDTQSPLRPDIXNLRFS
SGSAGHDSYRDGQQMHDGSSPAGRERSSSLQGMDMASLPPRKRPWQDGPGSGDPRERDSA
GVDGGRPPKREDPGYGPSGRSGRGWGPGGGPGPRRGPPIQRGLMRGAVRGR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacgtcggttctccgcagcgcttcttccacatgccgcgtttccagcaccag
gcgccgcgacaggtgttctacaaacgaccggatttcgcccaacaacaggcgatgcagcag
ctaacgtttgacgggaaacggatgagaaaagcggtgaatcggaaaactatcgactacaac
ccgtcagtcatcagacacctggagaaccgtctttggcagcgagatcatcgagacttccgg
gcggtccagcccgatgccggatgctacaacgacctggttcctcctctggggatgctgaac
aatcccatgaacgccgtcaccacaaagtttgtccgaacttccacgaacaaagtcaagtgt
cccgtttttgtggtcaggtggacccctgagggtcgccgtctggtcacaggagcctcgagt
ggggagttcactctgtggaacggactcaccttcaacttcgagaccatcttacaggcgcac
gacagtccggtgcgagccatgacctggtctcacaacgacatgtggatgctaacggcggac
cacggcggctacgtcaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagtttctctcccacagataataaatttgccacctgc
tccgacgacggcaccgtccggatctgggacttcctgcgctgccacgaggagaggatcctc
cgaggtcacggcgctgatgtgaagtgtgtcgactggcatcccaccaaaagtctggtggtc
tccgggagtaaggacagccaacagccaatcaaattctgggacccgaagaccggacagagc
ctggcgacgctccacgcccacaaaaacacggtgatggaggtgaagtggaacctgaacggc
aattggctgctgacggcgtcacgtgaccacctgtgtaagctgttcgacatcaggaacctg
aaggaggagctgcaggtgttcagaggacacaagaaggaggcgacagcggtggcgtggcac
cccgtccacgaaggcctgttcgccagcggaggatccgacggctccctgctgttctggcac
accggggtggagaaggaggtgggcgggatggagatggcccacgaagggatgatctggagt
ctggcttggcacccgttgggtcacatcctgtgctccggctccaacgaccacaccagtaaa
ttctggaccaggaaccgaccgggggataagatgagggaccgctacaacctgaacctgctg
cctgggatgtcggaggacggcgtggagtacgacgacgtggacctgaacaacatggcctcc
atccccggcatggggatccccgagcagctgaaggcggccatggagcaggagcagagcagt
aaagaggccgcccccgatgtggagatgtccatccccggtctggactgggggatggatgag
gtcatggggaaagacaccaagaaggttccgcagaagaaagtcccgtacgccaaacccatc
ccggcccagttccagcaggcctgggcggagaataaagtacccatgatgcctcccggcgcg
gatctgtccaaagacaggaaggtggagcagaaggtggacatgaagaagaaaacccaggcg
gaaatcgagcaggaaatggcggcgctgcagtacaccaaccccatgctgctggagcaaatg
aagatggaccggatgaaccagatgaacgccgatgggaacctgggcccccaacaggggccg
gggcccatgtcctccttctccggcgccggaggcccaggactacctggccagcaaggtttt
ccccaaaacatgcctcctcagcaaatgtcaaacaacatggggccccccatgggccccgga
ggcatgcagcctcctttcatggcccctggacaaatggggccaccttctggaccccagtcc
caccaggggccgcctcaggacatgatgggaccaccagacatgcaaggacagcaaggaatg
cagagacaccccggcccccccagaaacatggggccccaggggcctcacagggggatgcag
gggccccccagtgggatgatgggccctccttctcggggaatgggtcccagagagcctcaa
ggacctccagctcagggggggatgatgtcttcacaggggaacatgatgggccctcagggt
ggaatgatggggcccccatccaggactcacggcaacatgccaaacaactatgggatgggc
aacatgcacggccctccaggaagcatgcaggggccccccggtaatgtccaaggaccccac
ggaaacatgcaggggcctcccgggaacatgcaaggaccgcacgggaacatgcaggggcct
cacggaaacgtgcaggggtcccaaggaaacatgcaggggcccccgtacgggcagcaccac
ggccagaactcggggcccatgatgcacggaatgggtcagcaggggcccaacagtaaaggt
gacccccgggggcccctacccaaccaccacctgggcccccccgagcgacagactcctgga
ggtcccgaatcgggttcgggtccctactggggggacaaccagcagggtcggcgggggcca
caggacttcgattccgccagggactaccacgtcagggaggagggctggaggcctggatac
ccaggggggggcgggggaggagggggaggaggagggggagggggaggaggaggaaactgg
ggccccgatgagaggtttggtggagacttcaggggacggagggaggagaggnntgagttg
gatgcgatgtggggggggcgggggggtcagaaccgaatctggttgatctgaaccggacct
gatgggtgttgcaggttcaggggggggccgggtcggcccggagcgcgaagctaccccgac
gactacggcggccaggaggaaggcttcgacagtccggaggagatgagccgaggctgggac
aacggggcccgagcgaggcccccacggggagcaggagggccccccagaggaggtngagcg
gaaccggaaccggacactcagagtccacttagacccgacatctagaacctgaggttctct
tctggttccgcaggtcacgacagctaccgagatggtcagcagatgcatgatgggtcgtct
ccggcggggcgcgagcgctcgtcctccctgcaggggatggacatggcgtccctgcccccc
cggaaacgtccgtggcaggacggtccgggcagcggagacccccgagaaagagattcagcc
ggcgtcgatggaggtcgtccccccaagagggaggacccgggttacggtccgtctggtcgc
agcggacgaggctggggccccggaggaggaccgggaccccgaagaggaccaccaatacag
agggggttaatgaggggggccgtccgaggcaggtag
DBGET
integrated database retrieval system
