Antennarius striatus (striated frogfish): 137613423
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Entry
137613423 CDS
T10427
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137613423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
astr03000
]
137613423
03021 Transcription machinery [BR:
astr03021
]
137613423
03036 Chromosome and associated proteins [BR:
astr03036
]
137613423
Transcription factors [BR:
astr03000
]
Eukaryotic type
Helix-turn-helix
ARID
137613423
Transcription machinery [BR:
astr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137613423
Chromosome and associated proteins [BR:
astr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137613423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
137613423
NCBI-ProteinID:
XP_068198735
LinkDB
All DBs
Position
19
Genome browser
AA seq
1860 aa
AA seq
DB search
MDVSPDPSSTTDPPPSGTGSGLLRYHGAGGGGPSSDQHGGQHSAGTGVTAALRGTMDQVQ
NPHEGYGSPGPYGHHPNHRPGSGDGGYGGTMSPSRPGSGSTAANHSKTAPAASSSTAGGG
FQRFPGQNQPQQLHPSGATPTLNQLLTSPSSVMRSYGSGYPDFNGPAQQASIGLAKDPQY
GAASHGWGGPQRSHPSVSPGGTGQGGGRSQVAPPMDPMALKRSQLYGMSSSPYAQQGAPY
STQLYGSPPPHRYPMGLPSRGQMPMGGLQYPQQQVSPYGQQGAGGYHPRQPPYFSPPQQQ
TAAPSQPPYMQPHPLPQQEVPQEAYGGRGQSVAMTPGKPNHEEMSLGEQERPSSLPDLSG
SIDDLPTGTEVVMSSGTSGSGSTQGNRGTRSPFSPHVSPRLPPPAHTGPSPSPSPSPASS
QLRSGPMSPSSSGAGPQLTPQGLGPALEEGPQTAMTQDRGFPPSISMQRSSQGPQFGPQQ
SAPPMSPHSASGGHHGSYHQGSAYSQYGPPGNYPRPPHYGGAPSANYSAPGPGPASSPMH
GHGPSTPAGRGPGPGPGGRPYPTAGSAMAPTSPGMPQPAGQGMGPPDANTSRKPNATSAP
AGPGRPPFARSPAYNHQSWSPQPPHPHTQQGNHVSTPAEHYGQGGYLGVAAMGGVVPGGA
YAQQPGSNSGRMTPQGRPFSSAPSGAVMMQAEGGGAHPDATQRVEFGKDGTGPAPDPPKR
KKASLPTLTGESITRLYDMGAEPERAAWVERYLSFMEGRGTPVPALPAVGRRPLDLCRLY
LAVRDIGGLAMVNKNKKWRELSSQLNVGTSSTSASSLKKQYIQYLFAYECQVERGEEPPP
EAPGPDAKKPPSLQARIQPPSPAPLQGPHTPQSSSSSLADAPGDVKPPTPVHTPQGPTAP
QPGSRKVVGVSVQDPLSDGSDLALHSRRGPSGPPYQQGGAPADPPMRLQYDANKDPYRPP
RKGPGPAEAFGPSQMPASALQEVYPRGMGPRPPYPYGPAYEGRSDHVTGPDGGGASPGGP
TGNDGNVYPNRFPQQRHGADGYGQQYHSVNYTSHQPLYPQQQGYKRAMEPFYPPAKRHEG
EVFGPRQPDVFGPYGGGGGAYATPERRPVQGPYPYPYPRDRQGPPQHSMMGSGPSAAPGG
PTEGLQTNMWPPRTDMSYTYSRPPHGPPYPGMGRGDDQENRGAPQDGQWLQPPYPTHSGS
SPSMPPLPCRQPPSSLQATPTVPNHVTRSHSPSPFPRPLGGSLSPNNAPYMSMKKPPGAP
PGPPAAQTPIHRDLGFPPATVEATPPNLKPRQRLTAKDVGAPEAWRVMMSLKSGLLAEST
WALDAISVLLYDDSTVGSFSLPQLPGFLELMVEYLRRCLIQIFGILGEYEVGAEGRRPLL
EPQIWPHEVKEEPKEAPDTSPTSNNQSAEEQRKQEGEMAPLEAPPPTEAALKEEAELKGE
EPEQAEPRPQQASKYDKLPIKIEEGEGWEEVVRRWAELNRPNGFVSGLLHWRAGGGDCTA
HIQTGETSPSTAEMEEEVSEDTPPETDGGTGSPEAGPLEDEARRGDDAPLSLAGAGQDAL
ARRCLCVSNVIRGLSVVPGNDAPMSRHPGLVLILGRLLLLCHRHPPRRRAVPGGGRGEDG
GRGCSRDEWRWGLLASLREDALVTLANVGGRLDLSRHPEGVCLPLLDGLLHWMVCPAAEA
QDPFGAGGGGASLSPRRLALECLCKLSILDANVDLLLATPPFSRQRALLAALVRLAGERR
SQVCREMAVATLSHLAQGEAGAARAIALQRGGVGTLVGFLEDGAASAAAQLHGAAPPPEP
PSINMMCRAAKALLAMARGEENRHQFVLLEGRLLDVSLAAALPPPVAAILYEVLFKIGRS
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagcccggacccgagcagcaccaccgaccctcctcccagcggcaccggctcc
gggctcctccggtatcacggggccggaggaggagggcccagctccgaccaacatggcgga
caacacagcgcagggacgggggtaacggcggcgctccgcggcaccatggaccaggttcag
aacccccacgaaggctacggcagccccggcccgtacggacaccacccgaaccaccggccc
ggctccggggatggcggctacgggggcacgatgagtccctcccggccggggagcggctca
accgccgctaaccacagcaaaacggccccggccgctagcagctccaccgcaggcggaggc
ttccagcggttccccggacagaaccagccgcagcagctgcacccgtccggggccacaccg
accctgaatcagctgttaacgtccccgagctccgtgatgcggagctacggcagcggctac
cccgacttcaacggccccgcacagcaggctagcatcgggctagcgaaggacccccagtac
ggcgcggcgagtcacggctggggaggaccgcagcgaagtcacccgagcgtcagcccgggg
ggcaccgggcagggcggcgggagatcccaggtggctccgcccatggacccgatggcgttg
aagcgctctcagctctacgggatgagcagcagcccgtacgcccagcagggggcgccctac
tccacccagctgtacggctcgccgcccccccaccgataccccatgggactgcccagcagg
gggcagatgcctatggggggcctgcagtacccccagcagcaggtgtctccgtacggccag
cagggcgccgggggctaccaccccagacaaccgccttacttcagccccccccagcagcag
accgccgcccccagccagccgccctacatgcagccccacccactgccccagcaggaagta
ccacaggaggcgtacggggggcggggccagtctgtcgctatgactcctgggaagccaaac
cacgaggagatgagtctgggcgaacaggagcggccgtccagcctaccggacctgtccggc
tccattgacgacctgcccaccggcactgaggtggtgatgagttcagggacgtcgggatcg
ggaagcactcagggtaaccgggggacccgctccccgttctcgccccacgtctcgccccgc
ctcccccccccggctcacacaggaccctccccctccccctcgccgtcccccgccagcagc
caactgcgatccggaccgatgtcccccagcagcagtggagcaggacctcagctgactccc
cagggattgggtcctgcactggaggaggggccccagacagccatgactcaggacagaggc
ttccccccctccatctccatgcagcgcagcagccaggggcctcagtttggccctcagcag
tcagcgccccccatgtccccccactcggcgtcgggggggcaccacggctcctaccaccag
ggcagcgcctacagccagtacggccccccgggtaactaccctcggcccccccactacggc
ggggctcccagtgccaactacagcgccccaggccccggccctgccagcagccccatgcac
ggccatggcccctccacccctgcaggccgggggcccggccccggcccgggggggcgaccc
taccccaccgctgggagcgccatggcacccacctcccccggcatgccgcagcccgccggg
cagggcatggggcccccggacgccaacaccagccgcaagccgaacgcgacgtcggcgcca
gccggacccggcaggccccccttcgctcgttccccagcctacaaccaccagtcgtggtcc
ccccagcctcctcacccccacacccagcagggaaaccatgtgtccacccctgccgagcat
tatgggcagggcggctacctgggtgtggcagcgatggggggcgtggtcccaggaggcgcg
tacgcccagcaaccaggaagcaactctgggaggatgaccccccagggacgccccttcagc
tccgccccctcaggcgccgtgatgatgcaggcggaagggggcggagctcatccagacgcc
acgcagagagtcgagttcggcaaagacggcaccggccccgcccccgatccgcccaaacgg
aagaaggccagcctgcccaccctgacaggcgagagcatcacccggctgtacgacatgggg
gcggagcccgagcgggcggcgtgggtggaacgttacctgagcttcatggaagggcggggc
acgcccgtccccgccctccccgccgtgggcaggaggccgctggacctgtgccgcctctac
ctggccgtcagggacatagggggcctggccatggtgaacaagaacaagaagtggagggag
ttgtcctcccagctgaacgtggggacgtccagcacctccgcctcctccctgaagaagcag
tacatccagtacctgttcgcctacgagtgtcaggtggagcggggggaggagcctccgcca
gaggccccggggcccgacgccaagaagcccccgtcgctccaggccaggatccagcctcca
tccccagcccccctgcagggcccccacaccccccagtccagcagcagctctctggccgac
gcccccggagacgtgaagccaccgacgcccgtccatacgccgcagggcccaacggccccc
cagcccggatccaggaaagtggtcggggtcagcgtccaggacccgttgtccgacggcagc
gatctggccctccacagcaggcgggggcccagcggccccccataccagcagggaggggcc
cccgcggacccacccatgaggctgcagtacgacgccaacaaggacccgtacagacccccc
aggaaaggtccaggacccgcagaggcctttggtcccagtcagatgcccgccagcgccttg
caggaggtgtaccctcgcgggatgggccccagacccccgtacccctacggccccgcctac
gagggcagatcggatcatgtgacagggcctgacgggggcggggcttcccctggtggtcca
accgggaacgacgggaatgtttaccccaacaggttcccccagcaaagacacggagctgac
ggctacgggcagcagtaccacagcgtgaactacacttcccatcagcccctgtacccccag
cagcagggctacaagcgtgcaatggagcccttctacccccccgccaaacgccatgagggg
gaggtgttcggcccccggcagcccgatgtgtttggcccctatggcggggggggtggggcc
tacgcgacccccgagcgccggccggtccagggcccgtacccctacccgtacccacgggac
cgtcaggggcccccccagcacagcatgatgggctcaggaccctccgccgcacccgggggc
cccacagagggactgcagaccaacatgtggccccccaggacagacatgagctacacgtac
agccggcccccccacgggcccccctacccagggatgggtcggggggacgaccaggagaac
aggggtgccccccaggacggccagtggctccagccgccgtatcccacccactctggctcc
tccccctccatgccccccctgccctgcaggcagcccccctcctccctccaggccacgccc
actgttcctaaccatgtcacccgctctcacagcccctcccccttcccccggcccctgggg
ggctctctgtcccccaacaatgccccctacatgtccatgaagaagccccccggagccccc
cccgggccccctgctgcacagacccccatccacagagacctcggcttcccccccgccact
gtggaggccacgccccccaacctgaagccacggcaacgcctcaccgccaaggacgtggga
gccccggaggcgtggcgggtgatgatgtcactgaagtccggcctcctggcggagagcacc
tgggctctggacgccatcagcgtcctgctgtacgacgactccacggtgggctccttcagc
ctcccccagctccctggttttctggagctgatggttgaatatttgcgccgctgcctgatc
cagatcttcggcatcctgggggagtacgaggtgggggccgagggccggaggcccctgttg
gagcctcagatctggccccacgaggtgaaggaggagccaaaggaggcgccagacacctcc
cccacctccaacaaccaatcagccgaggagcagaggaagcaggagggggagatggcgccc
ctagaggccccgccccccactgaggccgctttgaaagaggaggcggagctgaagggggag
gaaccagagcaggcagagccccgcccccagcaggcgagcaagtacgacaagctgccaatc
aagattgaggagggggaggggtgggaggaggtggtgcggcggtgggcggagctaaaccgc
cccaacggatttgtcagcggcctcctgcactggagggcggggggcggagactgcaccgcc
cacatccagacgggggagacctccccctccaccgccgaaatggaggaggaagtcagcgag
gacacgccccccgagactgatggaggtacaggttcccctgaggccggccccctggaggac
gaggcgcggcgtggcgacgatgcgccgctgtccctggcgggggcggggcaggacgcgctg
gcgcgccgctgcctctgcgtgtccaacgtgatccgggggctctctgtcgtccccggcaac
gacgcccccatgtcccgccacccggggctggtgctgatcctggggcgcctgctgctgctg
tgccaccgacaccccccccggaggcgggcggtgcccggcggggggcggggcgaggacgga
gggcggggctgcagccgtgacgagtggcgctgggggctcctggcgtccctcagggaagac
gccctggtgacgctcgccaacgtgggggggcggctggacctgtcgcgccacccggagggc
gtgtgcctccccctgctggacgggctgctgcactggatggtctgccccgccgccgaggct
caggacccgttcggcgccggggggggcggggcctcgctcagcccccgccgcctggcgctg
gagtgtctctgcaagctgagcatccttgacgccaacgtggacctgctgctggccacgccc
cccttcagccgccagcgggcgctgctcgccgcgctggtgcggctggcgggcgagaggcgg
agccaggtgtgccgggagatggcggtcgccacgctgtcccacctggcgcagggggaggca
ggggcggcgcgcgccatcgcgctgcagagggggggcgtgggaacgctggtcggcttcctg
gaggacggcgctgcgtcggcggcggcccagctgcacggcgctgccccgcccccagaaccc
cccagcatcaacatgatgtgtcgcgccgccaaggcgctgctcgccatggcgcggggggag
gagaaccggcaccagttcgtgctgctcgagggccgcctgctggatgtgtcgctggccgcc
gccctgcccccccccgtcgccgccatcctgtatgaagttctgtttaagatcgggcgctcg
tga
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