Antennarius striatus (striated frogfish): 137614282
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Entry
137614282 CDS
T10427
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
astr Antennarius striatus (striated frogfish)
Pathway
astr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
astr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137614282 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
astr03032
]
137614282 (topbp1)
03400 DNA repair and recombination proteins [BR:
astr03400
]
137614282 (topbp1)
DNA replication proteins [BR:
astr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
137614282 (topbp1)
DNA repair and recombination proteins [BR:
astr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
137614282 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
137614282
NCBI-ProteinID:
XP_068200123
LinkDB
All DBs
Position
20:3969888..3978842
Genome browser
AA seq
1511 aa
AA seq
DB search
MSKGNKEDFIVKFVEIKGQKTDHAVRAYEAILELQSEKHLKNIDEDAILQMKQKDKCLYV
FSSFNTPAFLHCKKLGCRVVSPLVVLYCLQQQYCVPKAEKPVYNMAMADVTISCTSLDKA
TRTEVMDLVLLMGGRVYLDLNVSVNHLIAGEVGSKKYLVAASLGKPILLPTWVKACWERS
QDSLFRYTDLPIEDYLCPVLRGCTVCVTGLSSTERKEVQRLCEQHGANYSGQLKMNECTH
LIVSEPTGQKYECAQKWNVYCVSLPWLFDSIQKGYCQDESRYTVNRNTSRTTRQQTSTPT
GTNKKDEGSSLLGWSHISVNASMTINDTALTNGTVSCLEAPDPIDSLDVTACRAEDLLDG
CKLYLCGLPVKKLEKLRRVVNSLGGLRFNQPSEELTHVVMGELDQDLKNFLSEAKHRPHV
LTVQWLLESFSKGSLLPEAAYLHPDCLPPATAPTTHRTSTYRPSAGPLVDSPSTPRHKRA
EEYLLSQYVDDDPTLVDMPQAGDETSITAPDPQPDLCAANNTRGPEPDSTLQEASEAGLF
SGKRFLLVGFGAEAEAQLSLLVTENGGRVRMGRTRVVADYAVVPLLGCSVEATVDEVVTD
TWLAMCVEKECVLQPSSNPLFTPIPTMEGRFPLRRCVLSVSQFTGAERESLVELAKHLGA
DVQDYFVRLANQKKGMLASTHLVLQTPEGTKYQAAKKWGLPAVTMHWLLESARSGKRAEE
SRFLVDLPPTPEKDEESFVGASQKPSMPPPARLSPEIPLLGLQSGKAVTPLDLGRFQSKV
FRSVLDEMKPRDDITTPKQNQEARQQNVVQKEPSLKLDTPSRFLSRDQLFRPSFNVKDAL
GVLETPGGESKPRGKVETPLTEIVQRNLKVALANSRQNDSSDMESASASPQLSKTTETKV
PEKDHPLDGVVICVSKKLGKMQSELNAIAASLGADFRWACDDTVTHYLYQGRVGDNTREY
RGLKERGLHVVSQYWLHACAEEQKHVPESLYPFTYNPKMSLNLSQVPSSSQRSPPLTRTQ
LRGVTEANDDKCEPIADEAAPSRRVSNGSVDKEEVQDAAERSGISETLEMRQNLQRQLQE
IMSATKLTTGRRASVRLNRVGSGGGDSGPNTPDGSRGRNGSRRTLEALRVSREAATDMNT
EPSQSEQIVWDDPTAREERAKLADHLQWPGSPSQHFEPPGPPPAAEDRPQLKDSMTDSEL
VEMAACDVIDQHMSKRATTPPTKQPANNILTPEAPSIAFPVTKPPVAPEPQEESKEEKQP
PRFQLSSLSPQERINYSHLIEELGGVVLDKQSFDPSCSHIIVGTPLRNEKYLAALAAGKW
ILHRSYLEASRAIGHFIPEEEFEWGSSSILDALPSITSQQRRLALAAMRWRKSLQGCSKQ
RGAFSGWTVMLNIDQNRESGFRRLLQSGGAKVLPSPSPSLYKEATHLFADFNRLKPGDFR
VDVSEASSQGVTCLKPEYIADYLMQDPTPPIELYWLTQAPTKGASEDTPGAASRKRKAAA
DSSRLKKSRLN
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggaaacaaggaagacttcattgttaagtttgtggaaattaaaggccagaaa
acagatcatgctgtcagggcttatgaggccattctggagctgcagtctgaaaaacacttg
aagaacatagatgaagatgccattttacagatgaagcagaaggacaagtgtctttatgtc
ttcagcagtttcaacaccccagcgtttctacactgcaaaaagcttggatgtcgagtggtg
agtcccctggtggtgttgtactgcctgcagcaacagtattgtgtccccaaagcagagaag
cccgtctataacatggccatggctgacgttactatttcatgcacgagcctggataaagca
actcggacagaggtgatggacctggtgctgctcatgggtggacgggtttatcttgaccta
aatgtatccgtcaatcatctgatagcaggagaggtgggcagcaagaagtatttggtggct
gccagtctgggaaaacccatacttctgcctacatgggtgaaagcctgctgggaaagatct
caggacagccttttcaggtacacagatctgcccatagaggactacctgtgtcctgtgctg
cgtggttgtacagtctgcgtgacgggcctgtccagcacggagcgtaaagaggtccaacga
ctctgtgagcagcacggagccaattactccggtcagctcaaaatgaacgagtgcacacac
ctcatcgttagtgaaccgacaggtcagaaatacgagtgtgcgcagaagtggaatgtgtat
tgcgtatccctgccctggttatttgacagcatacagaagggatattgccaagatgagagc
agatacactgtgaaccgcaatacatcaaggactacccgacagcaaacttctacccctacg
ggcaccaacaagaaggacgagggatcgtctctcttgggctggagccacatctctgtaaat
gccagcatgacaataaatgacaccgccctcaccaacggcaccgtcagttgtctggaggcg
ccagaccccatagacagcctggacgtcaccgcctgccgcgctgaggatttactggatggc
tgtaagctgtatctgtgcggcctgccggtgaagaaactggagaagctgcggcgtgtggtt
aactctttaggaggtctgcgcttcaaccagcccagtgaggaactcacacatgtggtcatg
ggagagctggaccaggacctcaagaattttctctccgaggcaaaacacagacctcatgta
ttaacagtccagtggctgctggagagtttcagcaaaggcagtttactcccagaagctgca
tacctccacccagactgtctgcccccagctacagctccaaccacccatcgtacctccacc
tacagaccctcagctggtcctctggtggacagtcccagcactcccaggcataagagggca
gaggaatacctgctttcacagtatgtggatgatgaccctacattagtcgacatgcctcaa
gcaggagatgagaccagcatcacagctccagatcctcagcctgacctctgtgcagcaaat
aacaccagaggaccagagccggactccaccctgcaagaggccagcgaggcaggcctgttc
tctgggaaacgcttccttcttgtaggcttcggcgccgaggcagaggcccagctttctctc
ctggtgacagaaaacgggggcagggtgcggatgggacgaacacgtgttgtagcagactac
gctgtggtccctttgttgggctgctcagttgaggccacggtggatgaggtggtcacggat
acctggctggccatgtgtgtggagaaggagtgtgttctccagccgtcctccaaccctttg
ttcacccccattcctacgatggaaggacgttttcctctcagacgttgtgtcctttctgtc
agccagttcaccggagcagagagggaatctttggtggagttggccaaacaccttggagcc
gatgtccaggattactttgtgcgcctggccaatcagaaaaaaggcatgctggccagcact
catctagtgttgcaaacccccgaaggaacaaagtaccaggcagcaaagaagtgggggctc
ccagctgtcaccatgcactggcttctggagtctgctcggagcggaaaacgggcagaagaa
agccgctttctagttgacctgccacccacaccagaaaaagatgaggagagttttgttggt
gcttcccagaagcccagcatgcccccgccagcacgtttgtctccagagatccccttactg
ggtctccagagcggtaaggctgtcaccccgctagacttgggccgcttccaaagcaaagtt
tttcgttctgtgttggatgaaatgaagcctagagacgacatcaccaccccaaaacaaaat
caggaggcccgacaacagaatgtcgttcagaaggagccgtctctgaagctggacaccccc
tctcgtttcctcagcagagaccagcttttcaggccttccttcaatgtcaaggatgcactt
ggagtgctggaaactcctgggggagaatcgaaaccaagagggaaggtggagacgcccctg
actgaaatcgttcagaggaacctgaaggtggcgctagcgaatagcagacaaaacgactcg
tcagatatggagtcggcttctgccagcccccaactcagcaaaacgacagagacgaaggtc
ccagaaaaagaccaccctctggatggtgtcgtgatctgtgtttcaaagaagctcggcaaa
atgcagagtgaactcaacgccatcgccgcctcgctcggcgctgacttcagatgggcatgt
gacgatacagtcactcactacctctaccaggggcgtgtcggggacaacacccgggagtac
agagggctgaaggagagggggcttcatgtggtctcccagtactggctgcacgcttgcgct
gaggagcagaagcatgtccccgagtctctctatcctttcacctacaaccccaagatgagt
ctgaacctcagccaggtgcccagcagctcccagagatctccgcctttaacacgaacccaa
cttagaggagtcactgaggcgaatgacgacaagtgtgagcccatcgcagatgaagctgcc
ccctcacgccgtgtgagcaatggaagcgtagataaagaagaggtgcaagacgcagcagaa
agaagtgggatttcagagactctggagatgagacagaacctgcagagacagctccaggag
atcatgtcagccaccaagctaacgacgggaaggcgcgcctcggtcaggctcaacagggtg
ggatcgggagggggtgactcgggccccaacacacctgatgggagccgtggacgcaatggg
agtagacgtactcttgaagctctgagagtttccagagaagctgcaacggacatgaacaca
gagccctctcagagcgaacagatagtttgggacgaccctacggcgagggaggagagagcc
aagctggccgatcatttacagtggcctgggagtccatcgcaacactttgagcccccaggg
cctccgcctgctgcagaagaccggcctcagctcaaggactccatgacagactctgagctg
gtggagatggctgcttgtgacgtcatcgaccaacacatgagcaaaagggccacaacacct
ccaacaaagcagccagcaaacaacatcctcactcctgaagcccccagcatcgccttccct
gtcacaaaacccccagtagcgccggagccacaggaggagagcaaggaagaaaagcagccc
cccagattccagctgtcctccctcagccctcaggagcgcatcaattacagtcacctgatc
gaggagctcggaggtgtcgtcctggacaagcagtctttcgaccccagctgctcacacatc
atcgtcgggactcctctgcgtaacgagaagtacctggcagcgctggcggcgggtaaatgg
atcctgcaccgctcgtacctggaggcgtcccgcgccatcggtcacttcattccggaggag
gagtttgagtggggcagcagctccatcctggatgcgttgccctccatcacctcccagcaa
aggagattagcgttagccgctatgcgttggaggaagtccctgcagggatgctccaagcaa
aggggagccttcagtggatggacagtcatgctgaacatagatcagaatagagaatcaggc
ttcaggcggttgctgcagtctggaggagcaaaagtcctgccgagcccctccccttcctta
tacaaggaagccacccacctgtttgcagacttcaaccgactgaagcccggtgacttcaga
gtcgacgtctcagaggcttcctcccagggagtcacatgcttgaagccagagtacattgca
gattacctcatgcaggatcccaccccgcccatagagctgtactggttgacccaggccccg
accaagggcgcctccgaagacactcccggcgctgcatcacggaagcgtaaagcggcggca
gacagctccaggctgaaaaagtcccgtctgaactga
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integrated database retrieval system
