Actinobacillus succinogenes: Asuc_0024
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Entry
Asuc_0024 CDS
T00558
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
asu
Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asu03009
]
Asuc_0024
Enzymes [BR:
asu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Asuc_0024
Ribosome biogenesis [BR:
asu03009
]
Prokaryotic type
rRNA helicases
Asuc_0024
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ABR73406
UniProt:
A6VKA9
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All DBs
Position
26199..27521
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AA seq
440 aa
AA seq
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MSQPTFDDFDLAPELLKALAKKGYDRPTAIQQESIPVAMEEQDLLGSAPTGTGKTAAFLL
PALQHLLDYPRKKPGAPRILVLTPTRELAMQVAEQAGELAQFTKLSIATITGGVAYQNHG
EVFNKNQDLVVATPGRLLQYIKEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLQDFADRILDNPAKIAVEPSRRERKKINQWYYHADSVEHKIKLVA
RFIAQENVTKGILFVRRREDVRELSETLRKRGIRSTYLEGEMAQTQRNNSIDKLKNGIVT
VLVATDVAARGIDIDDISHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVENHDYRLL
GKIKRYTGELLKPRIIEGLEPRTSPPKDGETKTVSKKAKVRKKEKLVEKRKAEQKKKVKL
RHKDSKNIGKRRKPANSENN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagccgacttttgatgatttcgatcttgcgccagaattgcttaaagcgttagct
aaaaaaggttacgaccgcccgaccgccattcagcaggaaagtattcccgtcgctatggaa
gaacaggatcttttaggttccgcaccgacaggtaccggcaaaacggcagctttcttactg
ccagccctccaacatctattggattatccccgcaaaaaaccgggtgcaccgcgcattttg
gtgttaacccccactcgcgaattagccatgcaggttgccgaacaagcgggtgaattggca
caattcacaaaactcagcatagccaccattaccggtggcgtagcataccaaaatcacggt
gaagtctttaacaaaaaccaagatctcgtagtcgccacgccgggacgcttactgcaatat
attaaagaagaaaatttcgattgccgttccgtggaaatactgattttcgacgaggcggac
agaatgctgcaaatgggattcggccaagatgcagaaaaaattgccgcagaaacccgttgg
cgtaaacaaacattgttattttccgccaccctggaaggcgaactgctgcaagatttcgcc
gatcgcattttggataatcccgccaaaattgctgtagaacccagtcggcgcgaaagaaag
aaaatcaaccagtggtattaccatgccgacagcgtagagcataaaatcaaactggtcgcc
cgttttatcgcacaggaaaacgtcacgaaaggcattcttttcgtgcgccgccgggaagac
gtgcgtgaattatcggaaaccttacgtaaacgcggcatccgttccacgtatcttgaaggc
gaaatggcgcaaacacagcgcaataattccatcgataaactcaaaaacggcattgttacg
gtattagtggcaaccgacgttgctgcacgtggaatcgacattgatgatattagccatgtt
atgaatttcgatttaccttacagtgccgacacctacctgcaccgaatcggacgtaccgca
cgtgccggtaaaaaaggtacggcagtttccttcgtggaaaatcatgattatcgtttactg
ggtaaaatcaaacgttatacgggagaattgctaaaaccacgtatcattgaaggattggaa
cctcgcaccagcccaccgaaagacggcgaaaccaaaaccgtttccaaaaaagccaaagtg
cgaaaaaaagaaaaactggttgaaaaaagaaaagcggagcaaaagaaaaaagtaaaatta
cgtcataaagatagcaaaaatatcggcaaacggcgtaagccagcaaatagcgaaaataac
taa
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