Actinobacillus succinogenes: Asuc_0347
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Entry
Asuc_0347 CDS
T00558
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asuc_0347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asu03019
]
Asuc_0347
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_0347
Enzymes [BR:
asu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Asuc_0347
Messenger RNA biogenesis [BR:
asu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Asuc_0347
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asuc_0347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
P-loop_SecA
Hanta_Gn-B
Helicase_Sgs1
adh_short
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABR73725
UniProt:
A6VL78
LinkDB
All DBs
Position
392874..394718
Genome browser
AA seq
614 aa
AA seq
DB search
MDKTAEISTALQKLKEVFGYQAFRLGQEEAINAALQGQDSLVVMATGNGKSLCYQLPALC
FPGLTLVISPLISLMKDQVDQLLANGIEADYLNSTQTFEQQQQVQNKAISGQLKLLYLSP
EKVMTNSFFSFISLCQVSFIAIDEAHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTAT
ADSTTRQDILQNLRLNRPHLYVGSFDRPNIRYTLVEKFKPVEQLCNFVVAQKGKSGIVYC
NSRNKSEKVTEALKKRGVSAEFYHAGMDVTERERVQRAFQHDNIQVVVATIAFGMGINKS
NVRFVAHFDLSRSIEAYYQETGRAGRDDLPAEAVLFYEPSDYGWLHKILMEEPESPQRDI
KLHKLEAIGEFAESQTCRRLVLLNYFGENRQKPCGNCDICLDPPKKYDGLLDAQKILSAI
YRTGQRFGVQYVIGVLRGLNNQKIRDHRHDTLSVYGIGKDKSKEYWQSVIRQLIHLGFIR
QVMNEVGVMLHLTESARAVLRGEIKLELATPRLSAIATVASPQRSAVTNYDKDLFARLRF
LRKKIAERENIPPYIVFSDATLQEMSLYLPTSKAEMLQINGVGAIKWDRFAQPFMAIIKE
HKALFERSRQSLSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacagctgaaatttccaccgcacttcagaaactgaaagaggttttcggttat
caggcgttccgtctggggcaggaagaagcgattaacgcagcgttacaaggacaagacagc
ttggtagtgatggcgacgggaaacggcaaatctctgtgttatcaactgccggctctgtgt
tttccgggattaacgctggtgatctcgccgctgatttcgttaatgaaagatcaggtggat
caactgctggcgaacggtatcgaagcggattatctgaattccactcaaaccttcgagcag
cagcaacaggtgcaaaataaagcgatttccggacaactgaaattgctttatctttctcct
gaaaaggtgatgaccaatagttttttttcgtttatttccctctgccaggtgagctttatc
gccattgacgaagctcactgtatttcccaatggggacatgattttcgtcccgaatatacc
caactgggcggtttaaaagccagttttcccgatgcgccgattatggcgttaaccgccacc
gccgacagcactacccggcaggatattctgcaaaatctccgtttaaaccgaccgcacttg
tatgtaggcagttttgatcgtcctaatatccgttatacgctggtggaaaagttcaaaccc
gtggaacagttatgcaattttgtggtggcgcagaaaggaaaaagcggcattgtctactgt
aacagtcgcaataaatcggaaaaagtgaccgaagccttgaaaaaacgtggcgtttctgcg
gagttttaccatgcgggtatggacgttacggaacgggaacgggtgcaacgcgcttttcaa
cacgacaatattcaagtggtagtggcaactatcgcgttcggcatggggattaataaatcc
aatgtgcgttttgtagcgcatttcgatttatcccgtagcattgaggcctattatcaggaa
accgggcgcgcggggcgtgacgatttgccggcggaagccgtgttgttttacgaaccttcg
gattacggctggttacataaaattttaatggaagaaccggaatcgccgcaacgcgatatc
aaactgcacaagctggaagccatcggtgagtttgccgaaagccagacttgccgtcgttta
gtcttgttgaattatttcggcgaaaataggcaaaaaccctgcggaaattgcgacatttgt
cttgatccgccgaaaaaatatgacggtttgctggatgctcagaaaatcttgtccgccatt
taccgcaccggccagcgtttcggcgtacagtatgttatcggtgtattgcgaggactgaat
aatcagaaaatccgggatcaccggcacgataccctcagtgtatacggaatcggcaaggat
aaaagcaaagaatactggcaatcagtgatccgccagctgattcatttgggttttatccgt
caagtgatgaacgaagtgggcgtaatgctgcatttaaccgaaagcgcccgcgcggtgttg
cgcggtgaaataaaactggaactggcgacaccgcgcttatccgctattgcgacggttgct
tcaccgcaacgcagcgccgtcactaattatgataaagatttatttgcccgtttacgcttt
ttacgcaaaaaaattgctgaacgggaaaatattccgccctatattgtgtttagtgacgcc
acattgcaggaaatgtcgctttatctgcctaccagcaaagcggaaatgttacaaattaac
ggtgtgggcgctataaaatgggatcgcttcgcacaaccttttatggcgattatcaaagaa
cataaagctttgtttgaacggtcgcgacagtctctttcccagtaa
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