Actinobacillus succinogenes: Asuc_0495
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Entry
Asuc_0495 CDS
T00558
Name
(GenBank) helix-turn-helix-domain containing protein AraC type
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
asu
Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asu03000
]
Asuc_0495
Transcription factors [BR:
asu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Asuc_0495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Phage_T4_Ndd
zf_C2H2_6
Motif
Other DBs
NCBI-ProteinID:
ABR73870
UniProt:
A6VLM3
LinkDB
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Position
complement(542127..543305)
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AA seq
392 aa
AA seq
DB search
MAVDQEYYRVALLFNANKVYDRGVIEGVGQYLQASQCTWDIFLEDDFIYHKEEIKNLSID
GIIGDFDDLETAAILANIDVPVVAVGGSYQNADYYPDLPYIATDNEKLVEMAFLHLKEKG
LTRFAFYGLPVTTKKHWANERLATFQRLMDKYEYKSEIYLGDKTNSRNWLTAQANLCQWL
QTLPKYTGIIAVTDARARHLLQACEYLKIAVPEELCIMGIDNEDLIQHLSRISLSSVEQG
TTQIGYQAAKQLHRLLGGQTVPHRPLIVPPGKVIARRSTDYRSLQDPVVIQAMHYIHHRA
SQGIKTEQVLDHLRISRSNLEQRFKAEMNKTIHQVIHEEKLDRAKNMLKFTDVPIQEIAE
ICGYPSLQYFYAVFKKEHRQTPKEFREQFLAY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggatcaagaatattatcgcgttgcgctcctgtttaacgccaataaagtttat
gatcgaggagtaattgaaggtgtcgggcaatacttacaagcttcccaatgcacatgggat
atttttttagaagacgactttatttatcataaagaggaaattaaaaatctttctatcgac
ggtatcatcggtgattttgatgatcttgaaaccgccgcaatcctagcaaatattgacgta
cccgtcgtagccgtgggcggttcatatcaaaacgccgattattatcccgatttgccttat
attgccaccgacaatgaaaaattagtcgaaatggcattcttacatttaaaagaaaaaggc
ttaacccggtttgctttttacggactccccgttactacgaaaaaacattgggcgaatgaa
cgtttggcaacttttcagcgcttaatggataaatatgagtataaaagcgaaatttacctt
ggagacaaaactaattctcgaaactggctcaccgcccaagcaaacttatgtcaatggttg
caaacattaccgaaatataccggaattattgcggtaaccgatgccagagcccgtcacttg
ttgcaagcctgcgaatatttaaaaatcgccgtaccggaagaactttgcataatgggaatt
gataatgaagatttaattcagcatttgtcccggatctcgctttcttcggtggaacaaggc
acaacccaaatcggttatcaggcagccaaacagttacaccgcttactaggaggacaaacc
gttccccaccgtcctttgattgttccgcccggcaaagtcattgcacgccgttctacggat
tatcgatcattgcaagaccctgttgtgatccaggccatgcactatattcaccatcgcgcc
agccaaggtataaaaaccgaacaagttctcgatcacttacggatttcccgttcgaattta
gaacaacgctttaaggccgaaatgaataaaaccattcatcaagttatccatgaagaaaaa
ctggatcgcgccaaaaacatgttaaagtttaccgatgtaccgattcaggaaatcgcagag
atttgcggttatccttcattacagtatttttatgcggtattcaagaaagaacaccgacaa
acccccaaagaattcagagaacaatttttagcttattaa
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