Actinobacillus succinogenes: Asuc_0728
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Entry
Asuc_0728 CDS
T00558
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asuc_0728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asu03019
]
Asuc_0728
Messenger RNA biogenesis [BR:
asu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Asuc_0728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ABR74100
UniProt:
A6VMA3
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All DBs
Position
complement(788347..788940)
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AA seq
197 aa
AA seq
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MIDFDGYRPNVGIVICNRKGQVLWAKRYGQNSWQFPQGGINEGETPEQAMFRELFEEVGL
QKKDVRVLYASKLWLRYKLPKRLLRHDSKPMCIGQKQRWFLLQLVCHEKEIDMHRTKSPE
FDGWRWVSFWYPVRQVISFKRDVYRRAMKEFAQFLFDPTKNDTALFQHHETKKAETGKKQ
PYYHKYAPQNKKGRKRR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacttcgatggctaccgtcctaatgttggcattgtaatttgcaaccgcaaaggg
caagtgctttgggcaaaaaggtacgggcaaaactcttggcaatttccgcaaggcggcatc
aatgaaggcgaaacgcccgaacaagcgatgtttcgggaattattcgaagaggtaggatta
caaaaaaaagatgtcagagtgctttatgcgtcaaagttatggttgcgttataaattgccg
aaacggttgttacgccacgacagcaaaccgatgtgtatcgggcaaaaacagcgttggttt
ctgttgcagttagtttgtcacgaaaaagaaatcgatatgcaccgcaccaaatctcccgaa
ttcgacggctggcgttgggtcagtttctggtatcccgtacgtcaggtgatttcctttaaa
cgagacgtatatcggcgggcaatgaaagaatttgcgcaatttttgttcgatccgacaaaa
aatgataccgcactttttcagcatcacgagacaaagaaagcggaaaccggcaaaaagcag
ccgtattatcacaaatacgccccgcaaaataagaaaggaagaaaacgcagatga
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