Actinobacillus succinogenes: Asuc_1066
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Entry
Asuc_1066 CDS
T00558
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
asu
Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asu03016
]
Asuc_1066
Enzymes [BR:
asu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Asuc_1066
Transfer RNA biogenesis [BR:
asu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Asuc_1066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ABR74432
UniProt:
A6VN85
LinkDB
All DBs
Position
complement(1169827..1171806)
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AA seq
659 aa
AA seq
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MFQNNPLLSQLKQQLHDSKPHVEGVVKGTDKAYGFLETDKETFFIAPPAMKKVMHGDKIK
ATIETIGDKKQADPEELIEPMLTRFIAKVRFNKDKKLQVLADHPNINQPIGAAQTKAVKE
ELHEGDWVVATLKTHPLRDDRFFYAQIVEFICRAEDEFAPWWVTLARHQQSRYPVQGQDS
YKMLDPQTRKDLTALHFVTIDSESTQDMDDALYIEPLEQNGEQTGWKLTVAIADPTAYIA
ADSQIEKDARQRCFTNYLPGFNIPMLPRELSDELCSLMENETRAALVCRLQTDLQGELQG
KPEFLLADVQSKAKLAYNRVSDYLEQAEGAWQPENETTKQQIHWLHRFALTRINWRKTHG
LLFKEKPDYSFVLADNGHVQEIKAEYRRIANQIVEESMIVANICCAHYLADNAKTGIFNT
HAGFDKKFLPNAHHFLMTNLSNAQNQDELTVRYSVENLATLEGYCRMRHDIEPIDGDYLE
FRLRRFLTFAEFKSELAPHFGLGLTGYATWTSPIRKYSDMVNHRLIKACIAEQACLKPSD
DILTRLQEARKQNRMVERDIADWLYCRYLADKVENKPEFQAEVQDCMRGGLRVQLLENGA
SVFVPASTIHPNKEEIQVNSDELAFYINGERRYKIGDIVNIQLTEVKEETRSLIGNLVL
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaataatcctttattatctcaattaaaacaacaactgcacgacagcaaacca
catgtcgaaggcgtagtgaaaggtacggataaagcctacggtttcttggaaaccgataag
gaaaccttttttattgcgccgccggccatgaaaaaagtgatgcacggcgataaaatcaaa
gcgacaatcgaaaccatcggtgataaaaaacaggccgacccggaagaattaatcgaaccg
atgttaacccgttttattgccaaagtgcggttcaataaagacaagaaattgcaagttttg
gcggatcacccgaacatcaatcaaccgatcggcgcggcacaaaccaaagcggtaaaagaa
gaattgcatgaaggcgattgggtggtcgccaccttaaaaacccacccgctacgggacgat
cgttttttctatgcgcaaattgtagaatttatctgccgggccgaggacgaatttgcgcct
tggtgggtcactctggcacgtcaccagcaatcccgttatcccgtacaggggcaagacagc
tataaaatgctcgacccccaaactcgtaaagatttgaccgcccttcatttcgtcaccatc
gacagcgaaagcacacaggatatggatgacgcgctttatatcgaaccactcgaacaaaac
ggtgaacaaacgggatggaaactgaccgtagcaattgcggatcctaccgcatatattgcc
gctgattcgcaaattgaaaaagatgcccgtcagcgctgcttcaccaattatttgcccggt
tttaacattccgatgctgcctcgcgagctttccgacgaactctgttcgctaatggaaaat
gaaacccgtgccgcgctcgtgtgtcgtttacaaacggatttgcaaggcgaattacaaggt
aaacctgaatttctgcttgccgatgtacaatctaaggcaaaattagcttacaaccgcgtt
tccgattatttagaacaagcggaaggcgcctggcaacctgaaaacgaaacaacgaaacaa
caaattcattggttgcaccggtttgcgttaacccgtattaactggcgcaaaacccacggt
ttgttatttaaagaaaaaccggattacagtttcgttttggcggataacggtcacgtgcag
gaaattaaagcggaataccgtcgtattgccaatcaaatcgtggaagagtccatgattgtc
gccaatatttgctgcgcacattacctggcagataatgccaagaccgggattttcaacacc
catgccggattcgataaaaaattcctgccgaatgctcaccattttttaatgacgaattta
agtaatgcacaaaaccaggatgagttgacggttcgttattccgtagaaaacttagccacg
ctggaaggttattgccggatgcgccacgatattgaacccattgatggtgattatttagaa
ttccgcttacgccgcttcctcacctttgcggaatttaaatcggaactcgcgccgcacttc
ggcttgggtttaacgggttatgccacatggacgtcgccaatccgcaaatattccgatatg
gtgaatcaccgtttgattaaagcctgtattgccgagcaagcatgcttgaagccaagcgat
gacattctcactcgcctgcaggaggcgcgcaaacaaaaccgcatggtggaacgtgacatt
gccgattggctgtattgtcgctatttggcggacaaagtggaaaacaagcctgaattccaa
gcggaagttcaagactgcatgcgcggcggattacgggttcaattgctggaaaacggcgcc
agcgtttttgtaccggcatccaccattcatccgaataaagaagaaattcaggtgaatagc
gatgagctggcgttttatatcaacggcgaacgacgttacaaaatcggcgacatcgtgaat
attcagttaacagaagtcaaagaagaaacccgtagtttaatcggtaatttagtgttataa
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