Actinobacillus succinogenes: Asuc_1111
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Entry
Asuc_1111 CDS
T00558
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
asu
Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asu03016
]
Asuc_1111
Enzymes [BR:
asu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Asuc_1111
Transfer RNA biogenesis [BR:
asu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Asuc_1111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ABR74477
UniProt:
A6VND0
LinkDB
All DBs
Position
1235109..1236260
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AA seq
383 aa
AA seq
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MIKEIQNLPQFNLITTNSGLKTVCEQAQQKSAVALDTEFIRIRSYYPKLGLIQLYDGERV
SLIDPTTITDFSPFTALLADINVIKVLHACYEDLEVFSHYFQQLPEPIMDTQVMAGFLAF
PHSTGLASLIRHYLALEIDKGASRTDWLARPLSEKQLQYAAADVWYLLPLYEKMAVELAK
TRWQSAVEFDCGLLLEKQRCVKEAESAYLNVPNAWRLSPVELMRLKLLAKWRQEEAVKRD
LALNFVVHNESLWTVAKHAPKNTSELADLGLHPHEIRIHGKTMLKLVAQATREPEQTYPA
VIRRLSEDPRYKSTLKTLRQKLKAISPPDLAPEIIAGKRDLEKLMKWVWLQDNNPNKLPD
LLRNWRAEFGTELVKVLDQQQNE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaaatacagaatttaccgcaatttaatctcattactacgaattccgggctg
aaaaccgtgtgtgagcaggcgcaacagaaaagtgcggtcgccttggacaccgaatttatc
cgtataagaagttattatcccaaattaggtctgatccagttatatgacggtgagcgggtg
agtttgattgatccgacgaccattactgatttttcgccttttactgcgttactggcggat
attaatgttatcaaagtgctgcacgcctgttatgaagatctggaagtgttttctcactat
tttcagcaattgcccgaaccgattatggatacgcaagttatggcgggatttttagcgttt
ccgcattccaccggattagcgagtttgatccggcattatctggcgctggaaattgacaaa
ggggcctcgcgtaccgactggcttgcccgcccgttatcggagaaacagctacaatacgcg
gcggcggacgtgtggtatttattgcctttgtacgaaaaaatggcggtggaattggcgaaa
acccgttggcaaagtgcggtggaatttgattgcggtttgttgctggaaaaacagcggtgc
gtgaaagaagcggaatcggcttatttgaatgtacccaatgcatggcggttatcaccggtc
gaattgatgagattgaaattattagcgaaatggcggcaggaagaagcggtgaaacgcgat
ctggcccttaattttgtggtgcataacgaaagtttatggacagtggcgaaacatgcaccg
aaaaatacgtcggaattggcggatttgggacttcatcctcatgaaatccgtatccatgga
aaaacaatgctgaagttagtggcccaagcgacgcgtgaaccggaacagacttatcccgcc
gttattcgacggttgtccgaagatccgcgctacaaatcaacattaaagacattacggcaa
aaattaaaagctatttcaccgccggatttggcaccggaaatcattgccggtaaacgcgat
ttggaaaaacttatgaaatgggtttggctgcaagataacaatccgaataaactgccggat
ttattacgtaattggcgggcggaattcgggactgaactggttaaagtattagatcaacaa
cagaatgagtaa
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