Actinobacillus succinogenes: Asuc_1399
Help
Entry
Asuc_1399 CDS
T00558
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asu
Actinobacillus succinogenes
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asu03032
]
Asuc_1399
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_1399
Enzymes [BR:
asu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Asuc_1399
DNA replication proteins [BR:
asu03032
]
Prokaryotic type
DNA Topoisomerases
Asuc_1399
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Asuc_1399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DUF7351
Toprim_4
DUF4795
Toprim_2
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ABR74758
UniProt:
A6VP61
LinkDB
All DBs
Position
complement(1553851..1556463)
Genome browser
AA seq
870 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGTNYVVKSSVGHIRDLPTAGASSGEKAKPISTKGLSVEE
KSRIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVAELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGDDSRFSRVVFNEITKNAIKQAFEKPEQLNIDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEFWEVAAELFTVHKAGI
RLDVTAFKGKKFAPKNAEQAQSAVDFLAKSDFIVSDLETKPTSSRPRPPFITSTLQQAAS
TRLGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSRDALGMVRGYIEQNFGDSYLPPKPNF
YSSKENAQEAHEAIRPSDVNVSASHLSGMEKDAERLYDLIWRQFVACQMPAAQYDSTTLT
VSAGDYELKAKGRILRFDGWTKVLPQMGKNPEDQELPAVALQEKLELGSVQPTQHFTKPP
ARFTEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNQSF
AELMNYDFTAGMEDMLDQIANGTKDWKAELNQFFKDFSGQLSQAELDELEGGMKPNSIVP
TDIDCPACGRKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPESELLNVLDSETETKA
LMARKRCPKCGSAMDSYILDPHRKLHICGNNPNCDGYLVEEGAFKIKGYDGPVVACDKCG
ADMHLKLGRFGKYMACTNCDNTRRILKNGEVAQPKEEPIHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRESRPAEVAELALYRERLPGKLQYLADAPPKDPDGNDAVIRFSRKEKR
QYVSSTDKNGKQTKWIVDFIDGKWIERSKK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatccttggttattgtggaatcaccggccaaagcaaaaaccatcaataaatat
ctcggtactaactatgttgtaaaatccagtgtcggacatatccgcgatttacctactgcc
ggggcatcttcgggagaaaaggccaaaccgatttcaaccaaggggttaagcgtagaagaa
aaatccagaattaaagcggaaaaagaacggaacgccttggtaaaacgtatggggatagat
ccctatcacgactggaaggctaattaccaaattctgcccggtaaagaaaaagtagttgcc
gaacttaaatcccttgcaaaaaaagccgatcatatttatctcgctaccgatttggataga
gaaggagaggcgatagcctggcatttgcgtgaagtaatcggcggtgatgacagccggttc
agtcgcgtggtatttaatgaaattactaaaaatgccattaagcaggcgtttgaaaagccg
gaacagcttaatattgatcgcgttaatgctcaacaaacccgtcgctttttagatcgcgta
gtaggatttatggtttcgcctttattatggaaaaaagtggcgcgtggcttgtctgccgga
cgggttcagtctgtggcggtaaaattactggtggaacgggaacgggaaattaaagcgttc
caaccggaagaattctgggaggttgcagcggaattattcactgtgcataaagccggcatt
cgtcttgatgttactgcgtttaaaggtaaaaaatttgcaccgaaaaatgcggaacaagca
caaagtgcggtcgattttttagctaaatctgattttatcgtgtcggacttggaaaccaaa
cctaccagttcccgcccgcgcccgccgttcattacttcgaccttacagcaagccgccagt
accagattaggcttcagtgtgaagaaaaccatgatgttggcacaacgtttgtatgaagca
ggttatatcacctatatgcgtaccgattccaccaatttgagccgggatgctttgggtatg
gtacggggttatatcgaacaaaatttcggcgacagttatctcccgccgaaaccgaatttt
tattccagcaaagaaaatgcacaggaagcgcacgaagcgattaggccttccgatgtgaat
gtgtcggcttctcatttatccggtatggaaaaagatgccgaacgtttatatgatttaatt
tggcgtcagtttgtggcttgccaaatgcctgctgcgcaatatgacagtaccaccttaacg
gtttccgccggtgattacgagttgaaagccaaaggccgtattttacgctttgacggctgg
acaaaagtgttgccgcaaatgggaaaaaatccggaggatcaggaattgccggcagttgcg
ttgcaggaaaaattagaattgggcagcgtgcagccgacacagcatttcactaagccgccc
gcacgttttacggaagccgcactggttaaagagctggaaaaacgcggaatcggacgtcct
tcgacctatgccgccattatttctaccattcaggaacgcggttatgtgcgtaccgaaaat
cgccgtttttatgcggaaaaaatgggcgaaatagtgactgatcgtctgaatcagtctttt
gccgagctaatgaactatgattttaccgccggcatggaagacatgttagatcaaattgct
aacggaacaaaagattggaaagctgaattaaatcagttctttaaagatttttccggtcag
ttgagtcaagcggaattagatgaattggaaggcggcatgaaaccgaacagtattgtgccg
accgatattgattgtccggcctgtggacgtaaaatggccattcgtacagccagtaccggc
gtattcctcggctgtacgggctatgctttaccgcctaaagaacgttgtaaaaccacaatg
aatttaattcctgaatcggaattgctcaacgtattggacagtgaaaccgaaactaaagcg
ttaatggcgcgaaaacgttgtcctaaatgcggttcggctatggatagttatattttggat
ccgcaccgaaaactgcatatctgcgggaataatccgaattgcgacggctatcttgtagaa
gaaggggctttcaaaattaaaggttatgacggtccggtcgtggcatgtgataaatgtggt
gcggacatgcatttaaaactgggacgattcggtaaatatatggcatgtacaaattgcgat
aatacccgtaggattttgaaaaacggagaggtggcacagccaaaagaagaaccgattcat
ttcccggaattaaaatgtgaaaaatccgatgcgtatttcgtattacgcgacggcgcaagc
ggggtatttatgtctgctcacaattttccaaaatcacgggaatcgcgcccggctgaagtc
gcagagttggcattatatcgcgaacgattgccgggaaaattgcaatatctggccgatgcg
ccgccaaaagatccggacggcaacgatgctgtaatccgattcagccgtaaagaaaaacgt
caatatgtttcatcgacagataaaaacggcaagcaaaccaaatggattgttgattttatt
gatggaaaatggattgaacgcagtaaaaaataa
DBGET
integrated database retrieval system
