Actinobacillus succinogenes: Asuc_1879
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Entry
Asuc_1879 CDS
T00558
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
asu
Actinobacillus succinogenes
Pathway
asu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asuc_1879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_1879
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asuc_1879
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asuc_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
AAA_23
BCA_ABC_TP_C
nSTAND3
AAA_25
AAA_24
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ABR75230
UniProt:
A6VQI3
LinkDB
All DBs
Position
complement(2069168..2071996)
Genome browser
AA seq
942 aa
AA seq
DB search
MDQIDIRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRC
PHHNVPLAAQTISQMVDKVLSLPEESRMMLLAPVVKARKGEHVKILEQIAAQGYIRARID
GEICDLSDPPKLELQKKHSIEVVVDRFKVRSDLATRLAESFETTLELSGGTAVVASMDDS
KAEELVFSANFACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVEQYFDEARVVQHPGI
SLASGAVKGWDRRNFYYYQMMKSLSSHYHFDLEAPFESLPKKIRDIVLYGSGNEEIEFVY
LNDRGDSVVRRHPFEGILNNMTRRYKETESMSVREELAKNISTRPCKDCCGSRLRPEARH
VYIGQTNLPDIAEMSIGDALAFFEKMALAGQKAQIAEKILKEIKERLSFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEIIAQGNAEQIMANPNSVTGQFLSGKEKIEI
PSKRTALNKKKILRLNGATGNNLKSVNLEIPVGLFTCITGVSGSGKSTLINDTLFPLAQN
ALNRADNIDFAPYKSIEGLEHFDKVINIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE
SRARGYNPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDQCKGKRYNRETLEIRY
KGKTIHQVLDMTVEEAREFFDAIPAIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKL
ATELSKRDTGKTLYVLDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGNGGGEIIATGTPEQVAKDPHSHTARFLNPMLTQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatcgacattcggggagcgcgtactcacaacttaaaaaatatcaatctcacc
attccccgcgacaaacttatcgtcatcaccgggttatccggctcgggaaaatcctcgctg
gcttttgatactctatatgcggaaggacagcggcgttacgtggaaagtctgtccgcttat
gcccgtcagtttttatcattaatggaaaagccggatgtagacagtattgaagggctgtca
ccggcaatttccatcgaacaaaaatccacctcgcataatccccgttctacggtgggaacc
gtgacggaaattcacgattatttgcgtttactgtttgcccgggtgggtgagccgcgttgt
cctcaccataatgtaccgttagcggcgcaaaccatctcgcaaatggtggataaagtactg
agcttgccggaagaaagccgtatgatgttgttggcgccggtagtgaaagcgcgtaagggc
gaacatgttaaaatattagaacagattgccgcgcaggggtatatccgtgcccgaattgac
ggcgaaatttgtgatctgtccgatccgccgaagctggaattacagaaaaaacacagcata
gaagtcgtggtggatcgattcaaagtgcggtcggatttagctacaagattagcggaatct
tttgaaacgacgctggaattatccggcggtacggcggtggtggcctcaatggacgattcg
aaagcggaagaattggttttttccgctaatttcgcctgcccgcattgcggttattccgtg
ccggaactggaaccgcgcctgttttcgtttaacaaccccgccggcgcttgcccgacctgc
gacggtttgggcgtcgaacagtattttgacgaagcgcgtgtagtgcaacacccggggatt
tctctggcaagcggagcggtgaagggctgggatcgccgtaatttctattattatcaaatg
atgaaatccctgagcagccattaccattttgaccttgaagcgcctttcgagagtttaccg
aaaaaaatacgcgacattgtgttgtacggttccggcaatgaggaaatcgaattcgtttat
ttgaacgatcgcggcgatagcgtggtgcgtcgccatcctttcgaaggtattttgaataac
atgacgcgtcgttacaaagaaacggaatccatgtccgtacgggaagaattggcgaaaaac
atcagtacccgtccttgtaaggattgctgcgggtcccgtttacggcctgaagcccgccat
gtgtacatcggacaaaccaacctgccggatattgcggaaatgagtatcggcgatgcgctg
gcgttttttgaaaaaatggcgttagcgggacaaaaagcccaaattgcggaaaaaattctg
aaagaaattaaagaacgtttgtcgtttctggttaatgtggggctgaattatctttctctt
tcccgctcggcggaaaccctttccggcggtgaagcgcaacgtattcgtttagccagtcaa
atcggggcggggttggtaggcgtcatgtacgtactggacgaaccgtctatcggattgcac
caacgggataacgaacgcttgctcaacaccttgattcatttgcgcaatttagggaatacc
gtgattgtggtggaacatgacgaagacgccattcgagcggcagatcatattatcgatatc
ggtccgggcgccggtgtgcacggcggtgagattatcgcgcagggtaacgccgaacaaatt
atggcgaacccgaattccgttacgggtcaattcctgtcaggcaaagaaaaaatcgaaatt
ccgtcaaaacggaccgcacttaacaagaagaaaattctgcgcttgaacggcgcgacggga
aataatctgaaatccgttaatctggaaattccggtggggctgtttacctgtattacgggc
gtgtcgggttcgggcaaatccactttaattaacgatactttatttccgttggcgcaaaac
gcgctgaatcgggcggataacattgattttgcgccgtataaatctattgaaggactggaa
catttcgataaagtcattaatatcgaccaaagcccgatcggacgcacgccgcgttccaat
ccggcgacgtacaccggtttgtttacgccgattcgcgaattatttgccggcgtaccggaa
tcccgggcgcgcggttataacccgggacgtttcagttttaacgtgcggggcggacgctgt
gaagcctgtcagggcgacggtgttatcaaagtggaaatgcactttctgccggacgtttat
gtaccgtgcgaccaatgtaaaggaaaacgctataaccgtgaaaccttggaaatccgttat
aaaggtaaaactattcaccaagtgctggatatgacggtggaagaagcgcgcgaatttttt
gatgcgattcccgccattgcgcgtaaattacaaacgctgatggacgtgggcttgtcttat
atccgtctcggtcagtcttccactacgctttccggcggtgaagcccagcgggtaaaatta
gctaccgagttatcgaagcgcgatacgggcaaaactctttatgtgctggacgaaccgact
accggcttacatttcgccgatatcaagcagttgctggaagtgttgcatcgtttgcgtgat
cagggcaatactatcgtggtgatcgaacataatctggatgtgataaaaaccgccgactgg
atagtggatctcggtccggaaggcggtaacggcggcggtgaaattatcgccaccggtaca
ccggaacaagtggcaaaagatccgcattcgcacacggcacgttttttaaacccgatgttg
acgcagtaa
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