Actinobacillus succinogenes: Asuc_2059
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Entry
Asuc_2059 CDS
T00558
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asu
Actinobacillus succinogenes
Pathway
asu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Asuc_2059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asu03019
]
Asuc_2059
03009 Ribosome biogenesis [BR:
asu03009
]
Asuc_2059
Enzymes [BR:
asu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Asuc_2059
Messenger RNA biogenesis [BR:
asu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Asuc_2059
Ribosome biogenesis [BR:
asu03009
]
Prokaryotic type
rRNA helicases
Asuc_2059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ABR75405
UniProt:
A6VR08
LinkDB
All DBs
Position
complement(2263372..2265219)
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AA seq
615 aa
AA seq
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MTETKITFGDLGLPDFILSAVSEMGFESPSPIQHACIPHLLEGRDVLGMAQTGSGKTAAF
SLPLLAQIDSDEKYPQMLVMAPTRELAIQVADACEQFTKNAKGIRIVTLYGGQRYDIQLR
ALRQGAQVVVGTPGRILDHIKRGTLDLSALKFIVLDEADEMLRMGFIDDVETVMAELPEQ
HQTALFSATMPEPIRRITKRFMTNPQEVRIQSTQRTNPDIAQSCWYVRGYRKNEALLRFL
EVEDFDAAIIFTRTKTGTLDVTELLDKHGFRAAALNGDMTQQAREQTLDRLRNGSLDILV
ATDVAARGLDVERISLVVNYDIPLDAESYVHRIGRTGRAGRSGSAILFVEPRERRLLGNI
ERLMKKPIEEVELPNHERLQACRRAKFVAKITKQLEHHDLEKYRSLLEDLFTADQDQEDI
AAAMLMLLQGKQKLILPPDAPMPKRNERRERANRSQRSDERRGYGVPKSMDLYRIEIGRS
DGVEVRHIVGAIANEGDINSRNIGHIKLFDDYSTIELPQGMPKQLLRHFEKTRVLNKQMQ
MSFVREVQSGERAERFEHRDGKRRANERFHERGEHRFNDRGFKGDRKFGGKFDRTFKDVG
RKEFREKGFKGSRHS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactaaaattacctttggcgacttaggtctgcctgactttatcctttctgca
gtttcggaaatgggttttgaatcaccttctcctatccagcacgcctgtattccgcacctt
ttagaaggtcgtgacgtgctgggtatggcacaaaccggaagcggtaaaaccgccgctttt
tctttgcctttattggcgcagatcgatagtgacgaaaaatatcctcaaatgttggtgatg
gcgccgacgcgcgaactggcaattcaagtggcggatgcctgtgaacaatttacgaaaaat
gcgaaaggtattcgtatcgttacgctttacggcggacaacgttacgatattcaacttcgt
gcgttacgccaaggcgcccaagtggtggtggggacgccgggtcgtattctggaccatatc
aagcgcggtaccttggatctttccgcgttaaaatttatcgtgttggatgaagcggacgag
atgttacgtatgggctttatcgacgatgtagaaaccgtgatggcggaattgccggaacag
caccaaacggcattgttctcggccactatgccggaaccgattcgtcgtattaccaaacgt
tttatgacgaatccgcaggaggttagaatccaatcgacccaacgtactaatcctgatatt
gctcaaagctgctggtatgtacgcggttatcgtaaaaatgaggcattattgcgttttctg
gaagtggaagattttgatgccgctattattttcacccgtaccaaaacaggcacattagac
gttacggaattattggacaaacacggtttccgtgccgccgcattaaacggtgatatgacc
caacaggcgcgtgaacaaacccttgatcgtttacgtaacggcagtttggatattttagtg
gcgacggatgtggctgcccgcggtttggatgtggaacgcatcagtttggtagtgaattat
gatattccgttagatgccgaatcttacgtacaccgtataggccgtaccgggcgggccggt
cgttccggcagcgctattttatttgtggaaccgcgcgaacgtcgcttgttaggcaatatc
gaacgtttgatgaaaaaaccgattgaggaagtggaattgccgaaccatgaacgtttgcaa
gcctgccgccgtgccaaatttgtggcgaaaatcaccaaacagcttgaacatcacgattta
gaaaaataccgtagcttattggaagatttgtttaccgcagatcaggatcaggaagacatt
gccgccgctatgttaatgttgttacaaggtaaacaaaaattgattttgccgccggatgcg
ccgatgccgaaacgtaacgaacgccgtgaacgggctaatcgctcccaacgttctgatgaa
cgtcgcggttacggggtaccgaaatcgatggatttgtaccgtatcgaaatcggtcgttcc
gatggggtggaggtgcgtcatattgtgggtgcgattgccaatgaaggtgatattaacagc
cgcaatatcggtcatatcaaattatttgatgattattccactatcgaattaccgcaaggc
atgccgaagcaattactgcgtcatttcgaaaaaacacgcgtactgaataaacaaatgcaa
atgtctttcgttcgtgaagttcaaagcggagaacgcgccgaacgtttcgaacatcgcgac
ggtaagcgtcgcgctaatgagcgtttccatgaacggggagagcatcgttttaatgatcga
ggttttaaaggcgaccgtaaattcggcggaaaatttgaccgcacttttaaagacgtcggt
cgcaaagaatttcgtgaaaaaggctttaaaggcagtcgtcacagctaa
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